RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 CITO14578 2027 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 NOTCH4Q99466 2003 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 TRIP11Q15643 1979 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 MTCL1Q9Y4B5 1905 aaKnown RBP3.56□□□□□ -1.84
HTT-210ENST00000512909 SCN1AP35498 2009 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 C2orf16Q68DN1 1984 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 TMEM129A0AVI4 362 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 BCLAF3A2AJT9 711 aaKnown RBP3.55□□□□□ -1.84
HTT-210ENST00000512909 GTPBP10A4D1E9 387 aaKnown RBP3.55□□□□□ -1.84
HTT-210ENST00000512909 K7EQD1 137 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 MLNRO43193 412 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 TNFSF12O43508 249 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 KIAA0513O60268 411 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 NME6O75414 186 aaPredicted RBP3.55□□□□□ -1.84
HTT-210ENST00000512909 POP4O95707 220 aaKnown RBP3.55□□□□□ -1.84
HTT-210ENST00000512909 CHRNGP07510 517 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 RHOCP08134 193 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 ZNF806P0C7X5 589 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 TPBGLP0DKB5 382 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 TDGF1P13385 188 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 ZNF10P21506 573 aaPredicted RBP3.55□□□□□ -1.84
HTT-210ENST00000512909 OR1E1P30953 314 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 HOXA6P31267 233 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 SDC4P31431 198 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 RDXP35241 583 aaKnown RBP3.55□□□□□ -1.84
HTT-210ENST00000512909 P2RY2P41231 377 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 CSKP41240 450 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 MATKP42679 507 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 PTGER3P43115 390 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 ALDH3B1P43353 468 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 NSFP46459 744 aaKnown RBP3.55□□□□□ -1.84
HTT-210ENST00000512909 LUMP51884 338 aaPredicted RBP3.55□□□□□ -1.84
HTT-210ENST00000512909 NDST2P52849 883 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 C21orf59P57076 290 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 CDKL1Q00532 357 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 ACTN3Q08043 901 aaPredicted RBP3.55□□□□□ -1.84
HTT-210ENST00000512909 AP1B1Q10567 949 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 SGCBQ16585 318 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 MS4A13Q5J8X5 152 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 ZC2HC1BQ5TFG8 222 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 C1orf189Q5VU69 101 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 FBXL22Q6P050 247 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 DCUN1D2Q6PH85 259 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 GSG1LQ6UXU4 331 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 B3GLCTQ6Y288 498 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 ZNF730Q6ZMV8 503 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 CATSPERDQ86XM0 798 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 MMAAQ8IVH4 418 aaKnown RBP3.55□□□□□ -1.84
HTT-210ENST00000512909 LAX1Q8IWV1 398 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 OR4N5Q8IXE1 308 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 FAM71AQ8IYT1 594 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 ZNF557Q8N988 423 aaPredicted RBP3.55□□□□□ -1.84
HTT-210ENST00000512909 TRPV3Q8NET8 790 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 ZNF397Q8NF99 534 aaPredicted RBP3.55□□□□□ -1.84
HTT-210ENST00000512909 NPRL2Q8WTW4 380 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 RXFP2Q8WXD0 754 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 SHC3Q92529 594 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 FAM46BQ96A09 425 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 CNRIP1Q96F85 164 aaPredicted RBP3.55□□□□□ -1.84
HTT-210ENST00000512909 PIWIL1Q96J94 861 aaKnown RBP3.55□□□□□ -1.84
HTT-210ENST00000512909 AGPAT1Q99943 283 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 PIGQQ9BRB3 760 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 C11orf70Q9BRQ4 267 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 EDEM2Q9BV94 578 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 ABCG8Q9H221 673 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 LHX5Q9H2C1 402 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 ZNF665Q9H7R5 613 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 PLEKHA3Q9HB20 300 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 TMEM9BQ9NQ34 198 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 DYRK4Q9NR20 520 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 FBXL12Q9NXK8 326 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 ADAM22Q9P0K1 906 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 XPO7Q9UIA9 1087 aaKnown RBP3.55□□□□□ -1.84
HTT-210ENST00000512909 HPCAL4Q9UM19 191 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 CHD7Q9P2D1 2997 aa3.55□□□□□ -1.84
HTT-210ENST00000512909 DOCK6Q96HP0 2047 aa3.54□□□□□ -1.84
HTT-210ENST00000512909 TCHHQ07283 1943 aa3.54□□□□□ -1.84
HTT-210ENST00000512909 COL6A3P12111 3177 aa3.54□□□□□ -1.84
HTT-210ENST00000512909 TECTAO75443 2155 aa3.54□□□□□ -1.84
HTT-210ENST00000512909 IGHV1OR15-9A0A0B4J2B8 117 aa3.54□□□□□ -1.84
HTT-210ENST00000512909 A8MXK9 166 aa3.54□□□□□ -1.84
HTT-210ENST00000512909 BUB1O43683 1085 aa3.54□□□□□ -1.84
HTT-210ENST00000512909 LRCH4O75427 683 aa3.54□□□□□ -1.84
HTT-210ENST00000512909 HPRP00739 348 aa3.54□□□□□ -1.84
HTT-210ENST00000512909 TPM1P09493 284 aa3.54□□□□□ -1.84
HTT-210ENST00000512909 AREGP15514 252 aa3.54□□□□□ -1.84
HTT-210ENST00000512909 PTMSP20962 102 aa3.54□□□□□ -1.84
HTT-210ENST00000512909 MAT2AP31153 395 aaKnown RBP3.54□□□□□ -1.84
HTT-210ENST00000512909 PSMD8P48556 350 aa3.54□□□□□ -1.84
HTT-210ENST00000512909 CSNK1EP49674 416 aaKnown RBP3.54□□□□□ -1.84
HTT-210ENST00000512909 STK19P49842 368 aaPredicted RBP3.54□□□□□ -1.84
HTT-210ENST00000512909 NOVA1P51513 510 aaKnown RBP3.54□□□□□ -1.84
HTT-210ENST00000512909 TPMTP51580 245 aa3.54□□□□□ -1.84
HTT-210ENST00000512909 RPS14P62263 151 aaKnown RBP3.54□□□□□ -1.84
HTT-210ENST00000512909 KLHL30Q0D2K2 578 aa3.54□□□□□ -1.84
HTT-210ENST00000512909 GPR50Q13585 617 aa3.54□□□□□ -1.84
HTT-210ENST00000512909 TSTA3Q13630 321 aaPredicted RBP3.54□□□□□ -1.84
HTT-210ENST00000512909 RAPSNQ13702 412 aa3.54□□□□□ -1.84
HTT-210ENST00000512909 HEPACAMQ14CZ8 416 aa3.54□□□□□ -1.84
HTT-210ENST00000512909 SLC25A52Q3SY17 297 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms