RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 HSD11B1LQ7Z5J1 315 aa1.08□□□□□ -2.24
PDGFC-208ENST00000512711 ZNF410Q86VK4 478 aa1.08□□□□□ -2.24
PDGFC-208ENST00000512711 IFNEQ86WN2 208 aa1.08□□□□□ -2.24
PDGFC-208ENST00000512711 OR51G1Q8NGK1 321 aa1.08□□□□□ -2.24
PDGFC-208ENST00000512711 OR9A1PQ8NGU1 263 aa1.08□□□□□ -2.24
PDGFC-208ENST00000512711 SLC22A8Q8TCC7 542 aa1.08□□□□□ -2.24
PDGFC-208ENST00000512711 AENQ8WTP8 325 aaKnown RBP1.08□□□□□ -2.24
PDGFC-208ENST00000512711 CEP170P1Q96L14 293 aa1.08□□□□□ -2.24
PDGFC-208ENST00000512711 ZNF560Q96MR9 790 aa1.08□□□□□ -2.24
PDGFC-208ENST00000512711 COQ7Q99807 217 aa1.08□□□□□ -2.24
PDGFC-208ENST00000512711 ZNF670Q9BS34 389 aa1.08□□□□□ -2.24
PDGFC-208ENST00000512711 SRXN1Q9BYN0 137 aa1.08□□□□□ -2.24
PDGFC-208ENST00000512711 SLC5A7Q9GZV3 580 aa1.08□□□□□ -2.24
PDGFC-208ENST00000512711 MAGT1Q9H0U3 335 aa1.08□□□□□ -2.24
PDGFC-208ENST00000512711 COG4Q9H9E3 785 aa1.08□□□□□ -2.24
PDGFC-208ENST00000512711 GPN2Q9H9Y4 310 aaPredicted RBP1.08□□□□□ -2.24
PDGFC-208ENST00000512711 MTRF1LQ9UGC7 380 aaKnown RBP1.08□□□□□ -2.24
PDGFC-208ENST00000512711 ANGPTL2Q9UKU9 493 aa1.08□□□□□ -2.24
PDGFC-208ENST00000512711 NEUROG3Q9Y4Z2 214 aa1.08□□□□□ -2.24
PDGFC-208ENST00000512711 TTC21BQ7Z4L5 1316 aa1.08□□□□□ -2.24
PDGFC-208ENST00000512711 A0A0U1RQS6 177 aa1.07□□□□□ -2.24
PDGFC-208ENST00000512711 A0A1W2PRV1 198 aa1.07□□□□□ -2.24
PDGFC-208ENST00000512711 WASHC1A8K0Z3 465 aa1.07□□□□□ -2.24
PDGFC-208ENST00000512711 WASH3PC4AMC7 463 aa1.07□□□□□ -2.24
PDGFC-208ENST00000512711 FCN1O00602 326 aa1.07□□□□□ -2.24
PDGFC-208ENST00000512711 ZBTB14O43829 449 aa1.07□□□□□ -2.24
PDGFC-208ENST00000512711 AIREO43918 545 aa1.07□□□□□ -2.24
PDGFC-208ENST00000512711 TRIM3O75382 744 aaPredicted RBP1.07□□□□□ -2.24
PDGFC-208ENST00000512711 TNFSF13O75888 250 aa1.07□□□□□ -2.24
PDGFC-208ENST00000512711 IGLV3-19P01714 112 aa1.07□□□□□ -2.24
PDGFC-208ENST00000512711 PCCBP05166 539 aa1.07□□□□□ -2.24
PDGFC-208ENST00000512711 HMOX1P09601 288 aa1.07□□□□□ -2.24
PDGFC-208ENST00000512711 ALPPL2P10696 532 aa1.07□□□□□ -2.24
PDGFC-208ENST00000512711 ZNF18P17022 549 aa1.07□□□□□ -2.24
PDGFC-208ENST00000512711 COX7A1P24310 79 aa1.07□□□□□ -2.24
PDGFC-208ENST00000512711 KRTAP12-3P60328 96 aa1.07□□□□□ -2.24
PDGFC-208ENST00000512711 HERVK_113P63132 956 aa1.07□□□□□ -2.24
PDGFC-208ENST00000512711 ERVK-8P63133 956 aa1.07□□□□□ -2.24
PDGFC-208ENST00000512711 NME3Q13232 169 aa1.07□□□□□ -2.24
PDGFC-208ENST00000512711 FAM83EQ2M2I3 478 aa1.07□□□□□ -2.24
PDGFC-208ENST00000512711 DEFB116Q30KQ4 102 aa1.07□□□□□ -2.24
PDGFC-208ENST00000512711 FAM71E1Q6IPT2 247 aa1.07□□□□□ -2.24
PDGFC-208ENST00000512711 DLEU7Q6UYE1 221 aa1.07□□□□□ -2.24
PDGFC-208ENST00000512711 WASH2PQ6VEQ5 465 aa1.07□□□□□ -2.24
PDGFC-208ENST00000512711 ZNF836Q6ZNA1 936 aa1.07□□□□□ -2.24
PDGFC-208ENST00000512711 RFLNAQ6ZTI6 216 aa1.07□□□□□ -2.24
PDGFC-208ENST00000512711 ZNF547Q8IVP9 402 aa1.07□□□□□ -2.24
PDGFC-208ENST00000512711 ZNF615Q8N8J6 731 aa1.07□□□□□ -2.24
PDGFC-208ENST00000512711 CHCHD10Q8WYQ3 142 aaPredicted RBP1.07□□□□□ -2.24
PDGFC-208ENST00000512711 PIGCQ92535 297 aa1.07□□□□□ -2.24
PDGFC-208ENST00000512711 JAKMIP1Q96N16 626 aaKnown RBP1.07□□□□□ -2.24
PDGFC-208ENST00000512711 FOPNLQ96NB1 174 aa1.07□□□□□ -2.24
PDGFC-208ENST00000512711 OR2M2Q96R28 347 aa1.07□□□□□ -2.24
PDGFC-208ENST00000512711 CYP2S1Q96SQ9 504 aa1.07□□□□□ -2.24
PDGFC-208ENST00000512711 RASL11BQ9BPW5 248 aa1.07□□□□□ -2.24
PDGFC-208ENST00000512711 PELOQ9BRX2 385 aaKnown RBP1.07□□□□□ -2.24
PDGFC-208ENST00000512711 ERVK-6Q9BXR3 956 aa1.07□□□□□ -2.24
PDGFC-208ENST00000512711 KRTAP4-1Q9BYQ7 146 aa1.07□□□□□ -2.24
PDGFC-208ENST00000512711 POLR2J2Q9GZM3 115 aaKnown RBP1.07□□□□□ -2.24
PDGFC-208ENST00000512711 SIRPDQ9H106 197 aa1.07□□□□□ -2.24
PDGFC-208ENST00000512711 POLR2J3Q9H1A7 115 aaKnown RBP1.07□□□□□ -2.24
PDGFC-208ENST00000512711 TPK1Q9H3S4 243 aa1.07□□□□□ -2.24
PDGFC-208ENST00000512711 WFDC1Q9HC57 220 aa1.07□□□□□ -2.24
PDGFC-208ENST00000512711 IL1RAPL2Q9NP60 686 aa1.07□□□□□ -2.24
PDGFC-208ENST00000512711 RBM28Q9NW13 759 aaKnown RBP1.07□□□□□ -2.24
PDGFC-208ENST00000512711 GDAP2Q9NXN4 497 aa1.07□□□□□ -2.24
PDGFC-208ENST00000512711 C6orf203Q9P0P8 240 aaPredicted RBP1.07□□□□□ -2.24
PDGFC-208ENST00000512711 CRCT1Q9UGL9 99 aa1.07□□□□□ -2.24
PDGFC-208ENST00000512711 XPO7Q9UIA9 1087 aaKnown RBP1.07□□□□□ -2.24
PDGFC-208ENST00000512711 ERVW-1Q9UQF0 538 aa1.07□□□□□ -2.24
PDGFC-208ENST00000512711 UGT2A1Q9Y4X1 527 aa1.07□□□□□ -2.24
PDGFC-208ENST00000512711 ALOX15BO15296 676 aa1.06□□□□□ -2.24
PDGFC-208ENST00000512711 ZNF780AO75290 641 aaPredicted RBP1.06□□□□□ -2.24
PDGFC-208ENST00000512711 SNAPINO95295 136 aa1.06□□□□□ -2.24
PDGFC-208ENST00000512711 ZNF14P17017 642 aaPredicted RBP1.06□□□□□ -2.24
PDGFC-208ENST00000512711 HOXA9P31269 272 aa1.06□□□□□ -2.24
PDGFC-208ENST00000512711 EPHX2P34913 555 aa1.06□□□□□ -2.24
PDGFC-208ENST00000512711 LONP1P36776 959 aaKnown RBP1.06□□□□□ -2.24
PDGFC-208ENST00000512711 MAGEA4P43358 317 aa1.06□□□□□ -2.24
PDGFC-208ENST00000512711 EMDP50402 254 aa1.06□□□□□ -2.24
PDGFC-208ENST00000512711 ACTA1P68133 377 aa1.06□□□□□ -2.24
PDGFC-208ENST00000512711 CARTPTQ16568 116 aa1.06□□□□□ -2.24
PDGFC-208ENST00000512711 KRTAP13-2Q52LG2 175 aa1.06□□□□□ -2.24
PDGFC-208ENST00000512711 WDR74Q6RFH5 385 aaPredicted RBP1.06□□□□□ -2.24
PDGFC-208ENST00000512711 PAQR9Q6ZVX9 377 aa1.06□□□□□ -2.24
PDGFC-208ENST00000512711 COX15Q7KZN9 410 aa1.06□□□□□ -2.24
PDGFC-208ENST00000512711 VRK2Q86Y07 508 aa1.06□□□□□ -2.24
PDGFC-208ENST00000512711 PNKDQ8N490 385 aa1.06□□□□□ -2.24
PDGFC-208ENST00000512711 TMEM185AQ8NFB2 350 aa1.06□□□□□ -2.24
PDGFC-208ENST00000512711 OR10G2Q8NGC3 310 aa1.06□□□□□ -2.24
PDGFC-208ENST00000512711 GIMAP1Q8WWP7 306 aa1.06□□□□□ -2.24
PDGFC-208ENST00000512711 PTP4A1Q93096 173 aa1.06□□□□□ -2.24
PDGFC-208ENST00000512711 RAB7BQ96AH8 199 aa1.06□□□□□ -2.24
PDGFC-208ENST00000512711 ZNF2Q9BSG1 426 aaPredicted RBP1.06□□□□□ -2.24
PDGFC-208ENST00000512711 HDHD3Q9BSH5 251 aaPredicted RBP1.06□□□□□ -2.24
PDGFC-208ENST00000512711 TBC1D10AQ9BXI6 508 aa1.06□□□□□ -2.24
PDGFC-208ENST00000512711 COMMD4Q9H0A8 199 aa1.06□□□□□ -2.24
PDGFC-208ENST00000512711 AIG1Q9NVV5 245 aa1.06□□□□□ -2.24
PDGFC-208ENST00000512711 CWC25Q9NXE8 425 aaPredicted RBP1.06□□□□□ -2.24
PDGFC-208ENST00000512711 OPN4Q9UHM6 478 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms