RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 ATP5J2P56134 94 aa11.23□□□□□ -0.61
VEGFA-216ENST00000512683 RPS4XP62701 263 aaKnown RBP11.23□□□□□ -0.61
VEGFA-216ENST00000512683 PDE7AQ13946 482 aa11.23□□□□□ -0.61
VEGFA-216ENST00000512683 MLC1Q15049 377 aa11.23□□□□□ -0.61
VEGFA-216ENST00000512683 P2RY6Q15077 328 aa11.23□□□□□ -0.61
VEGFA-216ENST00000512683 HBMQ6B0K9 141 aa11.23□□□□□ -0.61
VEGFA-216ENST00000512683 HEPHL1Q6MZM0 1159 aa11.23□□□□□ -0.61
VEGFA-216ENST00000512683 WDR93Q6P2C0 686 aa11.23□□□□□ -0.61
VEGFA-216ENST00000512683 LRIG3Q6UXM1 1119 aa11.23□□□□□ -0.61
VEGFA-216ENST00000512683 ZCCHC23Q6ZST2 131 aa11.23□□□□□ -0.61
VEGFA-216ENST00000512683 R3HCC1LQ7Z5L2 792 aaKnown RBP11.23□□□□□ -0.61
VEGFA-216ENST00000512683 SLC43A2Q8N370 569 aa11.23□□□□□ -0.61
VEGFA-216ENST00000512683 NUP43Q8NFH3 380 aa11.23□□□□□ -0.61
VEGFA-216ENST00000512683 TCP10LQ8TDR4 215 aa11.23□□□□□ -0.61
VEGFA-216ENST00000512683 TWIST2Q8WVJ9 160 aa11.23□□□□□ -0.61
VEGFA-216ENST00000512683 CPNE4Q96A23 557 aaPredicted RBP11.23□□□□□ -0.61
VEGFA-216ENST00000512683 ARL8AQ96BM9 186 aa11.23□□□□□ -0.61
VEGFA-216ENST00000512683 PLPPR2Q96GM1 343 aa11.23□□□□□ -0.61
VEGFA-216ENST00000512683 TSSK3Q96PN8 268 aa11.23□□□□□ -0.61
VEGFA-216ENST00000512683 ROPN1BQ9BZX4 212 aaPredicted RBP11.23□□□□□ -0.61
VEGFA-216ENST00000512683 GRIP2Q9C0E4 1043 aa11.23□□□□□ -0.61
VEGFA-216ENST00000512683 REEP4Q9H6H4 257 aa11.23□□□□□ -0.61
VEGFA-216ENST00000512683 ESRP2Q9H6T0 727 aaKnown RBP11.23□□□□□ -0.61
VEGFA-216ENST00000512683 ROPN1Q9HAT0 212 aaPredicted RBP11.23□□□□□ -0.61
VEGFA-216ENST00000512683 DUSP22Q9NRW4 184 aa11.23□□□□□ -0.61
VEGFA-216ENST00000512683 MED17Q9NVC6 651 aa11.23□□□□□ -0.61
VEGFA-216ENST00000512683 VDAC3Q9Y277 283 aa11.23□□□□□ -0.61
VEGFA-216ENST00000512683 ACTL7BQ9Y614 415 aa11.23□□□□□ -0.61
VEGFA-216ENST00000512683 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.22□□□□□ -0.61
VEGFA-216ENST00000512683 GXYLT2A0PJZ3 443 aa11.22□□□□□ -0.61
VEGFA-216ENST00000512683 OVOL3O00110 214 aa11.22□□□□□ -0.61
VEGFA-216ENST00000512683 PIP5K1BO14986 540 aa11.22□□□□□ -0.61
VEGFA-216ENST00000512683 TYROBPO43914 113 aa11.22□□□□□ -0.61
VEGFA-216ENST00000512683 CXCL13O43927 109 aa11.22□□□□□ -0.61
VEGFA-216ENST00000512683 CRLF1O75462 422 aa11.22□□□□□ -0.61
VEGFA-216ENST00000512683 KCNK2O95069 426 aa11.22□□□□□ -0.61
VEGFA-216ENST00000512683 IGKV1D-16P01601 117 aa11.22□□□□□ -0.61
VEGFA-216ENST00000512683 ALOX5P09917 674 aa11.22□□□□□ -0.61
VEGFA-216ENST00000512683 BCKDHAP12694 445 aa11.22□□□□□ -0.61
VEGFA-216ENST00000512683 RPL3P39023 403 aaKnown RBP11.22□□□□□ -0.61
VEGFA-216ENST00000512683 ASMTP46597 345 aa11.22□□□□□ -0.61
VEGFA-216ENST00000512683 RFX3P48380 749 aa11.22□□□□□ -0.61
VEGFA-216ENST00000512683 SUMO3P55854 103 aaPredicted RBP11.22□□□□□ -0.61
VEGFA-216ENST00000512683 RPL38P63173 70 aaKnown RBP11.22□□□□□ -0.61
VEGFA-216ENST00000512683 HSPB3Q12988 150 aa11.22□□□□□ -0.61
VEGFA-216ENST00000512683 ATRQ13535 2644 aa11.22□□□□□ -0.61
VEGFA-216ENST00000512683 PLPPR5Q32ZL2 321 aa11.22□□□□□ -0.61
VEGFA-216ENST00000512683 TMEM201Q5SNT2 666 aa11.22□□□□□ -0.61
VEGFA-216ENST00000512683 EMBQ6PCB8 327 aa11.22□□□□□ -0.61
VEGFA-216ENST00000512683 GALNT10Q86SR1 603 aa11.22□□□□□ -0.61
VEGFA-216ENST00000512683 LILRA2Q8N149 483 aa11.22□□□□□ -0.61
VEGFA-216ENST00000512683 CLHC1Q8NHS4 586 aa11.22□□□□□ -0.61
VEGFA-216ENST00000512683 B4GALNT2Q8NHY0 566 aa11.22□□□□□ -0.61
VEGFA-216ENST00000512683 ROBO4Q8WZ75 1007 aa11.22□□□□□ -0.61
VEGFA-216ENST00000512683 SLC9A6Q92581 669 aa11.22□□□□□ -0.61
VEGFA-216ENST00000512683 GIMAP5Q96F15 307 aa11.22□□□□□ -0.61
VEGFA-216ENST00000512683 C3orf30Q96M34 536 aa11.22□□□□□ -0.61
VEGFA-216ENST00000512683 KLHL15Q96M94 604 aa11.22□□□□□ -0.61
VEGFA-216ENST00000512683 MS4A4EQ96PG1 132 aa11.22□□□□□ -0.61
VEGFA-216ENST00000512683 STACQ99469 402 aa11.22□□□□□ -0.61
VEGFA-216ENST00000512683 TMEM109Q9BVC6 243 aa11.22□□□□□ -0.61
VEGFA-216ENST00000512683 BTBD2Q9BX70 525 aa11.22□□□□□ -0.61
VEGFA-216ENST00000512683 GIMAP2Q9UG22 337 aa11.22□□□□□ -0.61
VEGFA-216ENST00000512683 FBN3Q75N90 2809 aa11.22□□□□□ -0.61
VEGFA-216ENST00000512683 COL6A5A8TX70 2615 aa11.22□□□□□ -0.61
VEGFA-216ENST00000512683 ROS1P08922 2347 aa11.21□□□□□ -0.61
VEGFA-216ENST00000512683 A0A0J9YW62 118 aa11.21□□□□□ -0.61
VEGFA-216ENST00000512683 KIAA1324LA8MWY0 1029 aaPredicted RBP11.21□□□□□ -0.61
VEGFA-216ENST00000512683 INAFM1C9JVW0 142 aa11.21□□□□□ -0.61
VEGFA-216ENST00000512683 H3BNH8 94 aa11.21□□□□□ -0.61
VEGFA-216ENST00000512683 PRKD3O94806 890 aa11.21□□□□□ -0.61
VEGFA-216ENST00000512683 CHEK2O96017 543 aa11.21□□□□□ -0.61
VEGFA-216ENST00000512683 LINGO3P0C6S8 592 aa11.21□□□□□ -0.61
VEGFA-216ENST00000512683 NID1P14543 1247 aa11.21□□□□□ -0.61
VEGFA-216ENST00000512683 AGTR1P30556 359 aa11.21□□□□□ -0.61
VEGFA-216ENST00000512683 ETV4P43268 484 aa11.21□□□□□ -0.61
VEGFA-216ENST00000512683 PRKAG1P54619 331 aa11.21□□□□□ -0.61
VEGFA-216ENST00000512683 IFFO1Q0D2I5 559 aa11.21□□□□□ -0.61
VEGFA-216ENST00000512683 GALNTL6Q49A17 601 aa11.21□□□□□ -0.61
VEGFA-216ENST00000512683 XKR7Q5GH72 579 aa11.21□□□□□ -0.61
VEGFA-216ENST00000512683 EXOSC6Q5RKV6 272 aaKnown RBP11.21□□□□□ -0.61
VEGFA-216ENST00000512683 SFRP5Q5T4F7 317 aa11.21□□□□□ -0.61
VEGFA-216ENST00000512683 MFSD12Q6NUT3 480 aa11.21□□□□□ -0.61
VEGFA-216ENST00000512683 WFDC8Q8IUA0 241 aa11.21□□□□□ -0.61
VEGFA-216ENST00000512683 DDIASQ8IXT1 998 aa11.21□□□□□ -0.61
VEGFA-216ENST00000512683 GABRG1Q8N1C3 465 aa11.21□□□□□ -0.61
VEGFA-216ENST00000512683 ZNF527Q8NB42 609 aa11.21□□□□□ -0.61
VEGFA-216ENST00000512683 AGR3Q8TD06 166 aa11.21□□□□□ -0.61
VEGFA-216ENST00000512683 PIK3R3Q92569 461 aa11.21□□□□□ -0.61
VEGFA-216ENST00000512683 AKAP1Q92667 903 aaKnown RBP eCLIP11.21□□□□□ -0.61
VEGFA-216ENST00000512683 PPCDCQ96CD2 204 aa11.21□□□□□ -0.61
VEGFA-216ENST00000512683 RNF145Q96MT1 663 aa11.21□□□□□ -0.61
VEGFA-216ENST00000512683 MDFIQ99750 246 aa11.21□□□□□ -0.61
VEGFA-216ENST00000512683 PIGUQ9H490 435 aa11.21□□□□□ -0.61
VEGFA-216ENST00000512683 EML4Q9HC35 981 aaKnown RBP11.21□□□□□ -0.61
VEGFA-216ENST00000512683 EQTNQ9NQ60 294 aa11.21□□□□□ -0.61
VEGFA-216ENST00000512683 SH3BP4Q9P0V3 963 aa11.21□□□□□ -0.61
VEGFA-216ENST00000512683 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.21□□□□□ -0.616e-10■□□□□ 8.2
VEGFA-216ENST00000512683 ZDHHC2Q9UIJ5 367 aa11.21□□□□□ -0.61
VEGFA-216ENST00000512683 RNF115Q9Y4L5 304 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms