RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 H7BYZ3 331 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 RDH16O75452 317 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 PSMG1O95456 288 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 CD8BP10966 210 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 FPR2P25090 351 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 LIMK2P53671 638 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 DMTNQ08495 405 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 ZNF674Q2M3X9 581 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 TUSC1Q2TAM9 212 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 LIPJQ5W064 366 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.42□□□□□ -1.06
VCAN-208ENST00000512590 SGPP2Q8IWX5 399 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 ACVR1CQ8NER5 493 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 CNN2Q99439 309 aaKnown RBP8.42□□□□□ -1.06
VCAN-208ENST00000512590 SUCNR1Q9BXA5 334 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 PREBQ9HCU5 417 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 GIMAP2Q9UG22 337 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 NME7Q9Y5B8 376 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 MROH6A6NGR9 719 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 MCRIP1C9JLW8 97 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 ANHXE9PGG2 379 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 RFXAPO00287 272 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 TERTO14746 1132 aaKnown RBP8.42□□□□□ -1.06
VCAN-208ENST00000512590 SC5DO75845 299 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 HLA-DPB1P04440 258 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 FAM163BP0C2L3 166 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 PMPCAQ10713 525 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 TMEM176BQ3YBM2 270 aaPredicted RBP8.42□□□□□ -1.06
VCAN-208ENST00000512590 EGFL6Q8IUX8 553 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 ALG3Q92685 438 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 SLC35E1Q96K37 410 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 PKP2Q99959 881 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 SLC22A11Q9NSA0 550 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 TMEM248Q9NWD8 314 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 CNTN6Q9UQ52 1028 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 FADS3Q9Y5Q0 445 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 A0A096LPI6 279 aa8.41□□□□□ -1.06
VCAN-208ENST00000512590 GALR3O60755 368 aaPredicted RBP8.41□□□□□ -1.06
VCAN-208ENST00000512590 MPIG6BO95866 241 aa8.41□□□□□ -1.06
VCAN-208ENST00000512590 C2P06681 752 aa8.41□□□□□ -1.06
VCAN-208ENST00000512590 TPSB2P20231 275 aa8.41□□□□□ -1.06
VCAN-208ENST00000512590 CD97P48960 835 aa8.41□□□□□ -1.06
VCAN-208ENST00000512590 ADARP55265 1226 aaKnown RBP8.41□□□□□ -1.06
VCAN-208ENST00000512590 NKX6-1P78426 367 aaPredicted RBP8.41□□□□□ -1.06
VCAN-208ENST00000512590 ZP2Q05996 745 aa8.41□□□□□ -1.06
VCAN-208ENST00000512590 SMAD4Q13485 552 aaKnown RBP8.41□□□□□ -1.06
VCAN-208ENST00000512590 TPSAB1Q15661 275 aa8.41□□□□□ -1.06
VCAN-208ENST00000512590 C17orf107Q6ZR85 190 aa8.41□□□□□ -1.06
VCAN-208ENST00000512590 SAMD9LQ8IVG5 1584 aa8.41□□□□□ -1.06
VCAN-208ENST00000512590 PDZD9Q8IXQ8 264 aa8.41□□□□□ -1.06
VCAN-208ENST00000512590 PYROXD2Q8N2H3 581 aa8.41□□□□□ -1.06
VCAN-208ENST00000512590 OR51G2Q8NGK0 314 aa8.41□□□□□ -1.06
VCAN-208ENST00000512590 SGMS2Q8NHU3 365 aa8.41□□□□□ -1.06
VCAN-208ENST00000512590 OSBPL7Q9BZF2 842 aa8.41□□□□□ -1.06
VCAN-208ENST00000512590 EGLN3Q9H6Z9 239 aa8.41□□□□□ -1.06
VCAN-208ENST00000512590 CHODLQ9H9P2 273 aa8.41□□□□□ -1.06
VCAN-208ENST00000512590 CXXC1Q9P0U4 656 aaPredicted RBP8.41□□□□□ -1.06
VCAN-208ENST00000512590 BLACEA4D250 179 aa8.41□□□□□ -1.06
VCAN-208ENST00000512590 F5H697 171 aa8.41□□□□□ -1.06
VCAN-208ENST00000512590 FAAHO00519 579 aa8.41□□□□□ -1.06
VCAN-208ENST00000512590 C8BP07358 591 aa8.41□□□□□ -1.06
VCAN-208ENST00000512590 CD9P21926 228 aa8.41□□□□□ -1.06
VCAN-208ENST00000512590 BCL6P41182 706 aa8.41□□□□□ -1.06
VCAN-208ENST00000512590 ZNF763Q0D2J5 394 aa8.41□□□□□ -1.06
VCAN-208ENST00000512590 SIRPB2Q5JXA9 342 aa8.41□□□□□ -1.06
VCAN-208ENST00000512590 ANKRD54Q6NXT1 300 aa8.41□□□□□ -1.06
VCAN-208ENST00000512590 MOB3BQ86TA1 216 aa8.41□□□□□ -1.06
VCAN-208ENST00000512590 ZBTB46Q86UZ6 589 aa8.41□□□□□ -1.06
VCAN-208ENST00000512590 RBM15BQ8NDT2 890 aaKnown RBP8.41□□□□□ -1.06
VCAN-208ENST00000512590 OR5K1Q8NHB7 308 aa8.41□□□□□ -1.06
VCAN-208ENST00000512590 PRRC1Q96M27 445 aa8.41□□□□□ -1.06
VCAN-208ENST00000512590 RBPJLQ9UBG7 517 aa8.41□□□□□ -1.06
VCAN-208ENST00000512590 LIPT1Q9Y234 373 aa8.41□□□□□ -1.06
VCAN-208ENST00000512590 TULP4Q9NRJ4 1543 aa8.41□□□□□ -1.06
VCAN-208ENST00000512590 YJEFN3A6XGL0 299 aa8.41□□□□□ -1.06
VCAN-208ENST00000512590 GPR137BO60478 399 aa8.41□□□□□ -1.06
VCAN-208ENST00000512590 ARHGEF15O94989 841 aa8.41□□□□□ -1.06
VCAN-208ENST00000512590 C1GALT1C1LP0DN25 315 aa8.41□□□□□ -1.06
VCAN-208ENST00000512590 ELAVL4P26378 380 aaKnown RBP8.41□□□□□ -1.06
VCAN-208ENST00000512590 PLA1AQ53H76 456 aa8.41□□□□□ -1.06
VCAN-208ENST00000512590 NKAIN2Q5VXU1 208 aa8.41□□□□□ -1.06
VCAN-208ENST00000512590 KCTD11Q693B1 232 aa8.41□□□□□ -1.06
VCAN-208ENST00000512590 FAM111BQ6SJ93 734 aa8.41□□□□□ -1.06
VCAN-208ENST00000512590 TMEM171Q8WVE6 324 aa8.41□□□□□ -1.06
VCAN-208ENST00000512590 ERVK-19Q9WJR5 959 aa8.41□□□□□ -1.06
VCAN-208ENST00000512590 EXOSC1Q9Y3B2 195 aaKnown RBP8.41□□□□□ -1.06
VCAN-208ENST00000512590 ANKRD66B4E2M5 251 aa8.41□□□□□ -1.06
VCAN-208ENST00000512590 CYR61O00622 381 aa8.41□□□□□ -1.06
VCAN-208ENST00000512590 MAP2K4P45985 399 aa8.41□□□□□ -1.06
VCAN-208ENST00000512590 DCAF7P61962 342 aa8.41□□□□□ -1.06
VCAN-208ENST00000512590 ACTA2P62736 377 aa8.41□□□□□ -1.06
VCAN-208ENST00000512590 ACTG2P63267 376 aa8.41□□□□□ -1.06
VCAN-208ENST00000512590 COL28A1Q2UY09 1125 aa8.41□□□□□ -1.06
VCAN-208ENST00000512590 PTCHD3Q3KNS1 767 aa8.41□□□□□ -1.06
VCAN-208ENST00000512590 DGAT2L7PQ6IED9 249 aa8.41□□□□□ -1.06
VCAN-208ENST00000512590 MFSD12Q6NUT3 480 aa8.41□□□□□ -1.06
VCAN-208ENST00000512590 XKR5Q6UX68 686 aa8.41□□□□□ -1.06
VCAN-208ENST00000512590 GAREM2Q75VX8 874 aa8.41□□□□□ -1.06
VCAN-208ENST00000512590 NPAS3Q8IXF0 933 aa8.41□□□□□ -1.06
VCAN-208ENST00000512590 OR52E2Q8NGJ4 325 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms