RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 SERINC4A6NH21 518 aa14.37□□□□□ -0.11
DDX41-214ENST00000512334 CYSRT1A8MQ03 144 aa14.37□□□□□ -0.11
DDX41-214ENST00000512334 OIP5O43482 229 aa14.37□□□□□ -0.11
DDX41-214ENST00000512334 UGT2B17O75795 530 aa14.37□□□□□ -0.11
DDX41-214ENST00000512334 TOXO94900 526 aa14.37□□□□□ -0.11
DDX41-214ENST00000512334 H6PDO95479 791 aa14.37□□□□□ -0.11
DDX41-214ENST00000512334 VIMP08670 466 aaKnown RBP14.37□□□□□ -0.11
DDX41-214ENST00000512334 ZCCHC18P0CG32 403 aa14.37□□□□□ -0.11
DDX41-214ENST00000512334 TROVE2P10155 538 aaKnown RBP eCLIP14.37□□□□□ -0.11
DDX41-214ENST00000512334 NR2F1P10589 423 aa14.37□□□□□ -0.11
DDX41-214ENST00000512334 UBL4AP11441 157 aa14.37□□□□□ -0.11
DDX41-214ENST00000512334 COX6B1P14854 86 aa14.37□□□□□ -0.11
DDX41-214ENST00000512334 ZNF17P17021 662 aa14.37□□□□□ -0.11
DDX41-214ENST00000512334 TIMP3P35625 211 aa14.37□□□□□ -0.11
DDX41-214ENST00000512334 CRATP43155 626 aa14.37□□□□□ -0.11
DDX41-214ENST00000512334 ATP4BP51164 291 aa14.37□□□□□ -0.11
DDX41-214ENST00000512334 P2RX1P51575 399 aa14.37□□□□□ -0.11
DDX41-214ENST00000512334 IRX1P78414 480 aaPredicted RBP14.37□□□□□ -0.11
DDX41-214ENST00000512334 GUCY1A3Q02108 690 aa14.37□□□□□ -0.11
DDX41-214ENST00000512334 ZNF141Q15928 474 aa14.37□□□□□ -0.11
DDX41-214ENST00000512334 BCL2A1Q16548 175 aa14.37□□□□□ -0.11
DDX41-214ENST00000512334 SYPL1Q16563 259 aa14.37□□□□□ -0.11
DDX41-214ENST00000512334 PLPPR5Q32ZL2 321 aa14.37□□□□□ -0.11
DDX41-214ENST00000512334 PLXDC2Q6UX71 529 aa14.37□□□□□ -0.11
DDX41-214ENST00000512334 P4HA3Q7Z4N8 544 aa14.37□□□□□ -0.11
DDX41-214ENST00000512334 GRAMD2AQ8IUY3 354 aa14.37□□□□□ -0.11
DDX41-214ENST00000512334 FUNDC1Q8IVP5 155 aa14.37□□□□□ -0.11
DDX41-214ENST00000512334 ZNF619Q8N2I2 560 aa14.37□□□□□ -0.11
DDX41-214ENST00000512334 ANKFN1Q8N957 763 aa14.37□□□□□ -0.11
DDX41-214ENST00000512334 STON2Q8WXE9 905 aa14.37□□□□□ -0.11
DDX41-214ENST00000512334 GTF2H4Q92759 462 aa14.37□□□□□ -0.11
DDX41-214ENST00000512334 AURKBQ96GD4 344 aaPredicted RBP14.37□□□□□ -0.11
DDX41-214ENST00000512334 KLHDC3Q9BQ90 382 aa14.37□□□□□ -0.11
DDX41-214ENST00000512334 RABEP2Q9H5N1 569 aa14.37□□□□□ -0.11
DDX41-214ENST00000512334 TPT1P8Q9HAU6 139 aa14.37□□□□□ -0.11
DDX41-214ENST00000512334 POLE3Q9NRF9 147 aa14.37□□□□□ -0.11
DDX41-214ENST00000512334 STOML1Q9UBI4 398 aa14.37□□□□□ -0.11
DDX41-214ENST00000512334 KCNE5Q9UJ90 142 aa14.37□□□□□ -0.11
DDX41-214ENST00000512334 AP4B1Q9Y6B7 739 aa14.37□□□□□ -0.11
DDX41-214ENST00000512334 KIAA1549Q9HCM3 1950 aa14.36□□□□□ -0.11
DDX41-214ENST00000512334 MBD3L4A6NDZ8 208 aaPredicted RBP14.36□□□□□ -0.11
DDX41-214ENST00000512334 MBD3L3A6NE82 208 aaPredicted RBP14.36□□□□□ -0.11
DDX41-214ENST00000512334 MBD3L5A6NJ08 208 aaPredicted RBP14.36□□□□□ -0.11
DDX41-214ENST00000512334 H0YC42 278 aa14.36□□□□□ -0.11
DDX41-214ENST00000512334 ZNF264O43296 627 aa14.36□□□□□ -0.11
DDX41-214ENST00000512334 HNRNPRO43390 633 aaKnown RBP14.36□□□□□ -0.11
DDX41-214ENST00000512334 CSTAP01040 98 aa14.36□□□□□ -0.11
DDX41-214ENST00000512334 BMP5P22003 454 aa14.36□□□□□ -0.11
DDX41-214ENST00000512334 CEACAM8P31997 349 aaPredicted RBP14.36□□□□□ -0.11
DDX41-214ENST00000512334 TPD52P55327 224 aaPredicted RBP14.36□□□□□ -0.11
DDX41-214ENST00000512334 SUMO3P55854 103 aaPredicted RBP14.36□□□□□ -0.11
DDX41-214ENST00000512334 EEFSECP57772 596 aaKnown RBP14.36□□□□□ -0.11
DDX41-214ENST00000512334 SF3A3Q12874 501 aaKnown RBP eCLIP14.36□□□□□ -0.11
DDX41-214ENST00000512334 BLOC1S3Q6QNY0 202 aa14.36□□□□□ -0.11
DDX41-214ENST00000512334 FRRS1Q6ZNA5 592 aa14.36□□□□□ -0.11
DDX41-214ENST00000512334 HMGN2P46Q86SG4 172 aa14.36□□□□□ -0.11
DDX41-214ENST00000512334 LIX1LQ8IVB5 337 aa14.36□□□□□ -0.11
DDX41-214ENST00000512334 GTPBP8Q8N3Z3 284 aaPredicted RBP14.36□□□□□ -0.11
DDX41-214ENST00000512334 C9orf106Q8NAJ2 232 aa14.36□□□□□ -0.11
DDX41-214ENST00000512334 NAXEQ8NCW5 288 aa14.36□□□□□ -0.11
DDX41-214ENST00000512334 MBD3L2Q8NHZ7 208 aaPredicted RBP14.36□□□□□ -0.11
DDX41-214ENST00000512334 MARVELD3Q96A59 401 aa14.36□□□□□ -0.11
DDX41-214ENST00000512334 RNF145Q96MT1 663 aa14.36□□□□□ -0.11
DDX41-214ENST00000512334 TRNT1Q96Q11 434 aaKnown RBP14.36□□□□□ -0.11
DDX41-214ENST00000512334 NPAS1Q99742 590 aa14.36□□□□□ -0.11
DDX41-214ENST00000512334 FGFR1OP2Q9NVK5 253 aa14.36□□□□□ -0.11
DDX41-214ENST00000512334 P2RX2Q9UBL9 471 aa14.36□□□□□ -0.11
DDX41-214ENST00000512334 LIPT1Q9Y234 373 aa14.36□□□□□ -0.11
DDX41-214ENST00000512334 L3MBTL1Q9Y468 752 aa14.36□□□□□ -0.11
DDX41-214ENST00000512334 PCDHB14Q9Y5E9 798 aa14.36□□□□□ -0.11
DDX41-214ENST00000512334 PRAMEF27A3QJZ7 478 aa14.35□□□□□ -0.11
DDX41-214ENST00000512334 DVL2O14641 736 aa14.35□□□□□ -0.11
DDX41-214ENST00000512334 ATP8B1O43520 1251 aa14.35□□□□□ -0.11
DDX41-214ENST00000512334 EIF4E2O60573 245 aaKnown RBP14.35□□□□□ -0.11
DDX41-214ENST00000512334 CHRM4P08173 479 aa14.35□□□□□ -0.11
DDX41-214ENST00000512334 UBTFL6P0CB48 400 aaPredicted RBP14.35□□□□□ -0.11
DDX41-214ENST00000512334 ETFAP13804 333 aa14.35□□□□□ -0.11
DDX41-214ENST00000512334 CAPN3P20807 821 aa14.35□□□□□ -0.11
DDX41-214ENST00000512334 ZNF136P52737 540 aa14.35□□□□□ -0.11
DDX41-214ENST00000512334 SUCLG1P53597 346 aaKnown RBP14.35□□□□□ -0.11
DDX41-214ENST00000512334 CLDN20P56880 219 aa14.35□□□□□ -0.11
DDX41-214ENST00000512334 DSTNP60981 165 aa14.35□□□□□ -0.11
DDX41-214ENST00000512334 RPS3AP61247 264 aaKnown RBP14.35□□□□□ -0.11
DDX41-214ENST00000512334 CHRNEQ04844 493 aa14.35□□□□□ -0.11
DDX41-214ENST00000512334 FOXF1Q12946 379 aa14.35□□□□□ -0.11
DDX41-214ENST00000512334 CBFBQ13951 182 aa14.35□□□□□ -0.11
DDX41-214ENST00000512334 MAPK14Q16539 360 aa14.35□□□□□ -0.11
DDX41-214ENST00000512334 TMEM44Q2T9K0 475 aa14.35□□□□□ -0.11
DDX41-214ENST00000512334 PPP4R4Q6NUP7 873 aa14.35□□□□□ -0.11
DDX41-214ENST00000512334 EIF3MQ7L2H7 374 aaKnown RBP14.35□□□□□ -0.11
DDX41-214ENST00000512334 TOR1AIP2Q8NFQ8 470 aa14.35□□□□□ -0.11
DDX41-214ENST00000512334 OR5W2Q8NH69 310 aa14.35□□□□□ -0.11
DDX41-214ENST00000512334 TM9SF2Q99805 663 aa14.35□□□□□ -0.11
DDX41-214ENST00000512334 TMEM120AQ9BXJ8 343 aa14.35□□□□□ -0.11
DDX41-214ENST00000512334 PINK1Q9BXM7 581 aa14.35□□□□□ -0.11
DDX41-214ENST00000512334 PAIP1Q9H074 479 aaKnown RBP14.35□□□□□ -0.11
DDX41-214ENST00000512334 SAP130Q9H0E3 1048 aa14.35□□□□□ -0.11
DDX41-214ENST00000512334 QRSL1Q9H0R6 528 aaKnown RBP14.35□□□□□ -0.11
DDX41-214ENST00000512334 TMEM185BQ9H7F4 350 aa14.35□□□□□ -0.11
DDX41-214ENST00000512334 TMEM45AQ9NWC5 275 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms