RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 OR7A17O14581 309 aa8.03□□□□□ -1.12
NUP54-211ENST00000512151 EIF1AYO14602 144 aaKnown RBP8.03□□□□□ -1.12
NUP54-211ENST00000512151 CLGNO14967 610 aa8.03□□□□□ -1.12
NUP54-211ENST00000512151 ACOX3O15254 700 aa8.03□□□□□ -1.12
NUP54-211ENST00000512151 CXCL13O43927 109 aa8.03□□□□□ -1.12
NUP54-211ENST00000512151 TSPAN2O60636 221 aa8.03□□□□□ -1.12
NUP54-211ENST00000512151 TRIM13O60858 407 aa8.03□□□□□ -1.12
NUP54-211ENST00000512151 LILRA1O75019 489 aa8.03□□□□□ -1.12
NUP54-211ENST00000512151 REM1O75628 298 aa8.03□□□□□ -1.12
NUP54-211ENST00000512151 STK16O75716 305 aa8.03□□□□□ -1.12
NUP54-211ENST00000512151 CLDN9O95484 217 aa8.03□□□□□ -1.12
NUP54-211ENST00000512151 CBX7O95931 251 aa8.03□□□□□ -1.12
NUP54-211ENST00000512151 CDH13P55290 713 aa8.03□□□□□ -1.12
NUP54-211ENST00000512151 CDH15P55291 814 aa8.03□□□□□ -1.12
NUP54-211ENST00000512151 DNAJB13P59910 316 aa8.03□□□□□ -1.12
NUP54-211ENST00000512151 MAP4K2Q12851 820 aa8.03□□□□□ -1.12
NUP54-211ENST00000512151 PPA1Q15181 289 aa8.03□□□□□ -1.12
NUP54-211ENST00000512151 STK11Q15831 433 aa8.03□□□□□ -1.12
NUP54-211ENST00000512151 TMEM44Q2T9K0 475 aa8.03□□□□□ -1.12
NUP54-211ENST00000512151 MST1LQ2TV78 715 aa8.03□□□□□ -1.12
NUP54-211ENST00000512151 LIPMQ5VYY2 423 aa8.03□□□□□ -1.12
NUP54-211ENST00000512151 TTC19Q6DKK2 380 aaPredicted RBP8.03□□□□□ -1.12
NUP54-211ENST00000512151 ZCCHC23Q6ZST2 131 aa8.03□□□□□ -1.12
NUP54-211ENST00000512151 GOLGA7Q7Z5G4 137 aa8.03□□□□□ -1.12
NUP54-211ENST00000512151 SLC22A9Q8IVM8 553 aa8.03□□□□□ -1.12
NUP54-211ENST00000512151 ZCCHC7Q8N3Z6 543 aaKnown RBP8.03□□□□□ -1.12
NUP54-211ENST00000512151 SVOPLQ8N434 492 aa8.03□□□□□ -1.12
NUP54-211ENST00000512151 TEX9Q8N6V9 391 aa8.03□□□□□ -1.12
NUP54-211ENST00000512151 OR10D3Q8NH80 312 aa8.03□□□□□ -1.12
NUP54-211ENST00000512151 MRPL24Q96A35 216 aaKnown RBP8.03□□□□□ -1.12
NUP54-211ENST00000512151 TMCO6Q96DC7 493 aa8.03□□□□□ -1.12
NUP54-211ENST00000512151 SLC35A4Q96G79 324 aa8.03□□□□□ -1.12
NUP54-211ENST00000512151 ADOQ96SZ5 270 aa8.03□□□□□ -1.12
NUP54-211ENST00000512151 NPAS1Q99742 590 aa8.03□□□□□ -1.12
NUP54-211ENST00000512151 PKP2Q99959 881 aa8.03□□□□□ -1.12
NUP54-211ENST00000512151 PAIP2Q9BPZ3 127 aaKnown RBP8.03□□□□□ -1.12
NUP54-211ENST00000512151 GPRC5BQ9NZH0 403 aa8.03□□□□□ -1.12
NUP54-211ENST00000512151 ZNF225Q9UK10 706 aa8.03□□□□□ -1.12
NUP54-211ENST00000512151 TMCO1Q9UM00 188 aa8.03□□□□□ -1.12
NUP54-211ENST00000512151 PCDHB10Q9UN67 800 aa8.03□□□□□ -1.12
NUP54-211ENST00000512151 WBP11Q9Y2W2 641 aaKnown RBP8.03□□□□□ -1.12
NUP54-211ENST00000512151 A0A0A6YYD5 115 aa8.02□□□□□ -1.13
NUP54-211ENST00000512151 GMNCA6NCL1 334 aa8.02□□□□□ -1.13
NUP54-211ENST00000512151 LINC01387J3KSC0 135 aa8.02□□□□□ -1.13
NUP54-211ENST00000512151 TO15178 435 aa8.02□□□□□ -1.13
NUP54-211ENST00000512151 BIRC5O15392 142 aa8.02□□□□□ -1.13
NUP54-211ENST00000512151 ITM2AO43736 263 aa8.02□□□□□ -1.13
NUP54-211ENST00000512151 SCO2O43819 266 aa8.02□□□□□ -1.13
NUP54-211ENST00000512151 LYZL6O75951 148 aa8.02□□□□□ -1.13
NUP54-211ENST00000512151 SUPT7LO94864 414 aa8.02□□□□□ -1.13
NUP54-211ENST00000512151 FAM107AO95990 144 aa8.02□□□□□ -1.13
NUP54-211ENST00000512151 PCNAP12004 261 aa8.02□□□□□ -1.13
NUP54-211ENST00000512151 NT5EP21589 574 aa8.02□□□□□ -1.13
NUP54-211ENST00000512151 BGNP21810 368 aa8.02□□□□□ -1.13
NUP54-211ENST00000512151 EDNRAP25101 427 aa8.02□□□□□ -1.13
NUP54-211ENST00000512151 CLCQ05315 142 aa8.02□□□□□ -1.13
NUP54-211ENST00000512151 DUSP2Q05923 314 aa8.02□□□□□ -1.13
NUP54-211ENST00000512151 GTF2H2Q13888 395 aa8.02□□□□□ -1.13
NUP54-211ENST00000512151 HHATQ5VTY9 493 aa8.02□□□□□ -1.13
NUP54-211ENST00000512151 GTF2H2CQ6P1K8 395 aa8.02□□□□□ -1.13
NUP54-211ENST00000512151 SLC22A25Q6T423 547 aa8.02□□□□□ -1.13
NUP54-211ENST00000512151 USP43Q70EL4 1123 aa8.02□□□□□ -1.13
NUP54-211ENST00000512151 LRRC70Q7Z2Q7 622 aa8.02□□□□□ -1.13
NUP54-211ENST00000512151 NUDCD3Q8IVD9 361 aa8.02□□□□□ -1.13
NUP54-211ENST00000512151 GBP7Q8N8V2 638 aaPredicted RBP8.02□□□□□ -1.13
NUP54-211ENST00000512151 ANKS4BQ8N8V4 417 aa8.02□□□□□ -1.13
NUP54-211ENST00000512151 NUP43Q8NFH3 380 aa8.02□□□□□ -1.13
NUP54-211ENST00000512151 OR52B6Q8NGF0 335 aa8.02□□□□□ -1.13
NUP54-211ENST00000512151 CDK15Q96Q40 435 aa8.02□□□□□ -1.13
NUP54-211ENST00000512151 CCDC134Q9H6E4 229 aa8.02□□□□□ -1.13
NUP54-211ENST00000512151 NOL11Q9H8H0 719 aaKnown RBP8.02□□□□□ -1.13
NUP54-211ENST00000512151 TNFRSF12AQ9NP84 129 aa8.02□□□□□ -1.13
NUP54-211ENST00000512151 MAT2BQ9NZL9 334 aa8.02□□□□□ -1.13
NUP54-211ENST00000512151 FLRT3Q9NZU0 649 aa8.02□□□□□ -1.13
NUP54-211ENST00000512151 PPP4R1LQ9P1A2 415 aa8.02□□□□□ -1.13
NUP54-211ENST00000512151 OPTCQ9UBM4 332 aa8.02□□□□□ -1.13
NUP54-211ENST00000512151 BCAP29Q9UHQ4 241 aa8.02□□□□□ -1.13
NUP54-211ENST00000512151 ZNF639Q9UID6 485 aa8.02□□□□□ -1.13
NUP54-211ENST00000512151 MID2Q9UJV3 735 aa8.02□□□□□ -1.13
NUP54-211ENST00000512151 TNPO3Q9Y5L0 923 aaKnown RBP8.02□□□□□ -1.13
NUP54-211ENST00000512151 AP4B1Q9Y6B7 739 aa8.02□□□□□ -1.13
NUP54-211ENST00000512151 BIRC6Q9NR09 4857 aa8.02□□□□□ -1.13
NUP54-211ENST00000512151 LOC390937A0A1W2PQ73 354 aa8.01□□□□□ -1.13
NUP54-211ENST00000512151 EBAG9O00559 213 aa8.01□□□□□ -1.13
NUP54-211ENST00000512151 NDUFAB1O14561 156 aa8.01□□□□□ -1.13
NUP54-211ENST00000512151 LYPLA1O75608 230 aaPredicted RBP8.01□□□□□ -1.13
NUP54-211ENST00000512151 GBAP04062 536 aa8.01□□□□□ -1.13
NUP54-211ENST00000512151 FAM58BPP0C7Q3 252 aa8.01□□□□□ -1.13
NUP54-211ENST00000512151 CPMP14384 443 aa8.01□□□□□ -1.13
NUP54-211ENST00000512151 DRD5P21918 477 aa8.01□□□□□ -1.13
NUP54-211ENST00000512151 APEX1P27695 318 aaKnown RBP8.01□□□□□ -1.13
NUP54-211ENST00000512151 BSGP35613 385 aa8.01□□□□□ -1.13
NUP54-211ENST00000512151 PPICP45877 212 aa8.01□□□□□ -1.13
NUP54-211ENST00000512151 EMDP50402 254 aa8.01□□□□□ -1.13
NUP54-211ENST00000512151 XKP51811 444 aa8.01□□□□□ -1.13
NUP54-211ENST00000512151 DVL1P1P54792 670 aaPredicted RBP8.01□□□□□ -1.13
NUP54-211ENST00000512151 STX5Q13190 355 aa8.01□□□□□ -1.13
NUP54-211ENST00000512151 CHIT1Q13231 466 aa8.01□□□□□ -1.13
NUP54-211ENST00000512151 ITGADQ13349 1161 aa8.01□□□□□ -1.13
NUP54-211ENST00000512151 E2F2Q14209 437 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms