RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 NFU1Q9UMS0 254 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 ARL2BPQ9Y2Y0 163 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 UTP11Q9Y3A2 253 aaKnown RBP4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 MMACHCQ9Y4U1 282 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 SAR1BQ9Y6B6 198 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 DUSP10Q9Y6W6 482 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 TSC2P49815 1807 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 DOCK6Q96HP0 2047 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 A0A1B0GV90 55 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 A0A1W2PNV4 684 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 SLC5A10A0PJK1 596 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 PRSS37A4D1T9 235 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 AQP7P3A6NL99 342 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 KCNU1A8MYU2 1149 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 M0QYV0 167 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 SLC22A1O15245 554 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 CAPN5O15484 640 aaPredicted RBP4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 LRP3O75074 770 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 ENTPD5O75356 428 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 MOCS2O96007 188 aaPredicted RBP4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 F7P08709 466 aaPredicted RBP4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 RAB40ALP0C0E4 278 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 UBCP0CG48 685 aaKnown RBP4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 HAPLN1P10915 354 aaPredicted RBP4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 PPT1P50897 306 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 EEFSECP57772 596 aaKnown RBP4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 UBE2KP61086 200 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 DHODHQ02127 395 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 EGR3Q06889 387 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 INCA1Q0VD86 236 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 PJVKQ0ZLH3 352 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 PDSS1Q5T2R2 415 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 MARC1Q5VT66 337 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 TXNDC8Q6A555 127 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 CBLN3Q6UW01 205 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 TMEM107Q6UX40 140 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 LIAT1Q6ZQX7 453 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 ZNF572Q7Z3I7 529 aaPredicted RBP4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 LDB1Q86U70 411 aaPredicted RBP4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 SATL1Q86VE3 508 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 KLHDC8AQ8IYD2 350 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 ZNF683Q8IZ20 524 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 C11orf44Q8N8P7 122 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 GATSQ8NAP1 163 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 ADPRHL1Q8NDY3 354 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 OR4D10Q8NGI6 311 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 CHPT1Q8WUD6 406 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 FAR2Q96K12 515 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 WFIKKN1Q96NZ8 548 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 PKMYT1Q99640 499 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 RBBP8Q99708 897 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 ZSWIM1Q9BR11 485 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 RBM24Q9BX46 236 aaKnown RBP4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 MCCC2Q9HCC0 563 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 ZNF334Q9HCZ1 680 aaPredicted RBP4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 MYOZ1Q9NP98 299 aaPredicted RBP4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 ZNF225Q9UK10 706 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 LOC105369274A0A096LPK9 316 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 LOC102723532A0A0G2JNH3 316 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 OR5K3A6NET4 321 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 A8MU76 341 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 C2CD4DB7Z1M9 353 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 SLC28A1O00337 649 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 SIGLEC6O43699 453 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 SCO2O43819 266 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 OR10H2O60403 315 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 CST8O60676 142 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 ITGA10O75578 1167 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 TRMUO75648 421 aaKnown RBP4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 RAD51DO75771 328 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 HAUS5O94927 633 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 OAS1P00973 400 aaKnown RBP4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 CST4P01036 141 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 TGFB1P01137 390 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 LCKP06239 509 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 SLC35E2BP0CK96 405 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 SLC35E2P0CK97 266 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 PET100P0DJ07 73 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 HGFP14210 728 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 CXCR2P25025 360 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 ACVR1BP36896 505 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 MPLP40238 635 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 HOXA1P49639 335 aaPredicted RBP4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 PGFP49763 221 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 RPL26P61254 145 aaKnown RBP4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 AP1S1P61966 158 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 RPL11P62913 178 aaKnown RBP4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 MC2RQ01718 297 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 TEKQ02763 1124 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 SLC34A1Q06495 639 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 KEAP1Q14145 624 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 GK2Q14410 553 aaPredicted RBP4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 TEAD2Q15562 447 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 ZNF750Q32MQ0 723 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 CRB2Q5IJ48 1285 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 LRIF1Q5T3J3 769 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 OR2A2Q6IF42 318 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 RWDD4Q6NW29 188 aaKnown RBP4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 LRRN1Q6UXK5 716 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 TMEM184AQ6ZMB5 413 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms