RNA–Protein interactions for RNA: ENST00000511895.1

LINC01088-208, Transcript of long intergenic non-protein coding RNA 1088, human

TSL 2 BASIC

Gene LINC01088, Length 795 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01088-208	ENST00000511895	GALK2	Q01415	458 aa		4.19	□□□□□ -1.74
LINC01088-208	ENST00000511895	EXOSC7	Q15024	291 aa	Known RBP	4.19	□□□□□ -1.74
LINC01088-208	ENST00000511895	SHROOM1	Q2M3G4	852 aa	Predicted RBP	4.19	□□□□□ -1.74
LINC01088-208	ENST00000511895	GPAT3	Q53EU6	434 aa		4.19	□□□□□ -1.74
LINC01088-208	ENST00000511895	RHBDD2	Q6NTF9	364 aa		4.19	□□□□□ -1.74
LINC01088-208	ENST00000511895	CCBE1	Q6UXH8	406 aa	Predicted RBP	4.19	□□□□□ -1.74
LINC01088-208	ENST00000511895	SERPINA12	Q8IW75	414 aa		4.19	□□□□□ -1.74
LINC01088-208	ENST00000511895	BIRC7	Q96CA5	298 aa		4.19	□□□□□ -1.74
LINC01088-208	ENST00000511895	TIGAR	Q9NQ88	270 aa		4.19	□□□□□ -1.74
LINC01088-208	ENST00000511895	AKAP7	Q9P0M2	348 aa	Predicted RBP	4.19	□□□□□ -1.74
LINC01088-208	ENST00000511895	EPS15L1	Q9UBC2	864 aa		4.19	□□□□□ -1.74
LINC01088-208	ENST00000511895	IKZF3	Q9UKT9	509 aa		4.19	□□□□□ -1.74
LINC01088-208	ENST00000511895	ATG4B	Q9Y4P1	393 aa		4.19	□□□□□ -1.74
LINC01088-208	ENST00000511895	CSMD2	Q7Z408	3487 aa		4.19	□□□□□ -1.74
LINC01088-208	ENST00000511895	PARP14	Q460N5	1801 aa		4.18	□□□□□ -1.74
LINC01088-208	ENST00000511895	C2orf16	Q68DN1	1984 aa		4.18	□□□□□ -1.74
LINC01088-208	ENST00000511895	KNTC1	P50748	2209 aa		4.18	□□□□□ -1.74
LINC01088-208	ENST00000511895	FAM168B	A1KXE4	195 aa		4.18	□□□□□ -1.74
LINC01088-208	ENST00000511895	CCT8L1P	A6NM43	557 aa		4.18	□□□□□ -1.74
LINC01088-208	ENST00000511895	EFCAB7	A8K855	629 aa		4.18	□□□□□ -1.74
LINC01088-208	ENST00000511895	RTN2	O75298	545 aa		4.18	□□□□□ -1.74
LINC01088-208	ENST00000511895	PRAMEF12	O95522	483 aa		4.18	□□□□□ -1.74
LINC01088-208	ENST00000511895	SERPINF2	P08697	491 aa		4.18	□□□□□ -1.74
LINC01088-208	ENST00000511895	KRTAP1-4	P0C5Y4	121 aa		4.18	□□□□□ -1.74
LINC01088-208	ENST00000511895	TRIM23	P36406	574 aa		4.18	□□□□□ -1.74
LINC01088-208	ENST00000511895	NSF	P46459	744 aa	Known RBP	4.18	□□□□□ -1.74
LINC01088-208	ENST00000511895	MSLN	Q13421	630 aa	Predicted RBP	4.18	□□□□□ -1.74
LINC01088-208	ENST00000511895	SLC10A1	Q14973	349 aa		4.18	□□□□□ -1.74
LINC01088-208	ENST00000511895	HAGH	Q16775	308 aa		4.18	□□□□□ -1.74
LINC01088-208	ENST00000511895	HSCB	Q8IWL3	235 aa		4.18	□□□□□ -1.74
LINC01088-208	ENST00000511895	VN1R17P	Q8TDU5	208 aa		4.18	□□□□□ -1.74
LINC01088-208	ENST00000511895	CRYGN	Q8WXF5	182 aa		4.18	□□□□□ -1.74
LINC01088-208	ENST00000511895	RAB39B	Q96DA2	213 aa		4.18	□□□□□ -1.74
LINC01088-208	ENST00000511895	JPH2	Q9BR39	696 aa	Predicted RBP	4.18	□□□□□ -1.74
LINC01088-208	ENST00000511895	DNAJC11	Q9NVH1	559 aa		4.18	□□□□□ -1.74
LINC01088-208	ENST00000511895	SENP1	Q9P0U3	644 aa		4.18	□□□□□ -1.74
LINC01088-208	ENST00000511895	TUBGCP4	Q9UGJ1	667 aa		4.18	□□□□□ -1.74
LINC01088-208	ENST00000511895	NUP205	Q92621	2012 aa		4.17	□□□□□ -1.74
LINC01088-208	ENST00000511895	CHEK1	O14757	476 aa		4.17	□□□□□ -1.74
LINC01088-208	ENST00000511895	RRP8	O43159	456 aa	Known RBP	4.17	□□□□□ -1.74
LINC01088-208	ENST00000511895	N4BP1	O75113	896 aa	Known RBP	4.17	□□□□□ -1.74
LINC01088-208	ENST00000511895	SNRPC	P09234	159 aa	Known RBP	4.17	□□□□□ -1.74
LINC01088-208	ENST00000511895	AZU1	P20160	251 aa		4.17	□□□□□ -1.74
LINC01088-208	ENST00000511895	ZNF131	P52739	623 aa		4.17	□□□□□ -1.74
LINC01088-208	ENST00000511895	NDST1	P52848	882 aa		4.17	□□□□□ -1.74
LINC01088-208	ENST00000511895	PDE7A	Q13946	482 aa		4.17	□□□□□ -1.74
LINC01088-208	ENST00000511895	GSG1	Q2KHT4	349 aa		4.17	□□□□□ -1.74
LINC01088-208	ENST00000511895	CAVIN4	Q5BKX8	364 aa		4.17	□□□□□ -1.74
LINC01088-208	ENST00000511895	UTF1	Q5T230	341 aa		4.17	□□□□□ -1.74
LINC01088-208	ENST00000511895	RSBN1	Q5VWQ0	802 aa	Predicted RBP	4.17	□□□□□ -1.74
LINC01088-208	ENST00000511895	NKAIN2	Q5VXU1	208 aa		4.17	□□□□□ -1.74
LINC01088-208	ENST00000511895	GTSF1	Q8WW33	167 aa		4.17	□□□□□ -1.74
LINC01088-208	ENST00000511895	C19orf43	Q9BQ61	176 aa		4.17	□□□□□ -1.74
LINC01088-208	ENST00000511895	TNMD	Q9H2S6	317 aa		4.17	□□□□□ -1.74
LINC01088-208	ENST00000511895	RAI14	Q9P0K7	980 aa		4.17	□□□□□ -1.74
LINC01088-208	ENST00000511895	PRODH2	Q9UF12	536 aa		4.17	□□□□□ -1.74
LINC01088-208	ENST00000511895	NOL7	Q9UMY1	257 aa	Known RBP	4.17	□□□□□ -1.74
LINC01088-208	ENST00000511895	MRPS2	Q9Y399	296 aa	Known RBP	4.17	□□□□□ -1.74
LINC01088-208	ENST00000511895	DLG5	Q8TDM6	1919 aa		4.17	□□□□□ -1.74
LINC01088-208	ENST00000511895	TLN2	Q9Y4G6	2542 aa		4.17	□□□□□ -1.74
LINC01088-208	ENST00000511895	IGHV3OR16-12	A0A075B7B8	117 aa		4.16	□□□□□ -1.74
LINC01088-208	ENST00000511895	HIDE1	A8MVS5	230 aa		4.16	□□□□□ -1.74
LINC01088-208	ENST00000511895	PGAM2	P15259	253 aa		4.16	□□□□□ -1.74
LINC01088-208	ENST00000511895	ZNF18	P17022	549 aa		4.16	□□□□□ -1.74
LINC01088-208	ENST00000511895	CXCL12	P48061	93 aa		4.16	□□□□□ -1.74
LINC01088-208	ENST00000511895	IGLV3-21	P80748	117 aa	Predicted RBP	4.16	□□□□□ -1.74
LINC01088-208	ENST00000511895	C17orf67	Q0P5P2	114 aa		4.16	□□□□□ -1.74
LINC01088-208	ENST00000511895	MICA	Q29983	383 aa		4.16	□□□□□ -1.74
LINC01088-208	ENST00000511895	HKDC1	Q2TB90	917 aa		4.16	□□□□□ -1.74
LINC01088-208	ENST00000511895	PRR30	Q53SZ7	412 aa	Predicted RBP	4.16	□□□□□ -1.74
LINC01088-208	ENST00000511895	TAF3	Q5VWG9	929 aa		4.16	□□□□□ -1.74
LINC01088-208	ENST00000511895	HIST2H2AA3	Q6FI13	130 aa		4.16	□□□□□ -1.74
LINC01088-208	ENST00000511895	UNC45B	Q8IWX7	931 aa		4.16	□□□□□ -1.74
LINC01088-208	ENST00000511895	C11orf42	Q8N5U0	333 aa		4.16	□□□□□ -1.74
LINC01088-208	ENST00000511895	SIGLEC12	Q96PQ1	595 aa		4.16	□□□□□ -1.74
LINC01088-208	ENST00000511895	NRN1	Q9NPD7	142 aa		4.16	□□□□□ -1.74
LINC01088-208	ENST00000511895	HYPK	Q9NX55	129 aa		4.16	□□□□□ -1.74
LINC01088-208	ENST00000511895	EMCN	Q9ULC0	261 aa		4.16	□□□□□ -1.74
LINC01088-208	ENST00000511895	LOXHD1	Q8IVV2	1947 aa		4.15	□□□□□ -1.74
LINC01088-208	ENST00000511895		A0A0A6YYD4	124 aa		4.15	□□□□□ -1.75
LINC01088-208	ENST00000511895	RSPH10B2	B2RC85	870 aa		4.15	□□□□□ -1.75
LINC01088-208	ENST00000511895	CYB561D2	O14569	222 aa		4.15	□□□□□ -1.75
LINC01088-208	ENST00000511895	CFLAR	O15519	480 aa		4.15	□□□□□ -1.75
LINC01088-208	ENST00000511895	FLOT1	O75955	427 aa		4.15	□□□□□ -1.75
LINC01088-208	ENST00000511895	LY6G6D	O95868	133 aa		4.15	□□□□□ -1.75
LINC01088-208	ENST00000511895	OAS1	P00973	400 aa	Known RBP	4.15	□□□□□ -1.75
LINC01088-208	ENST00000511895	RSPH10B	P0C881	870 aa		4.15	□□□□□ -1.75
LINC01088-208	ENST00000511895	AREG	P15514	252 aa		4.15	□□□□□ -1.75
LINC01088-208	ENST00000511895	GDF1	P27539	372 aa		4.15	□□□□□ -1.75
LINC01088-208	ENST00000511895	CHRNA3	P32297	505 aa		4.15	□□□□□ -1.75
LINC01088-208	ENST00000511895	CASP3	P42574	277 aa		4.15	□□□□□ -1.75
LINC01088-208	ENST00000511895	NPRL3	Q12980	569 aa		4.15	□□□□□ -1.75
LINC01088-208	ENST00000511895	HTR4	Q13639	388 aa		4.15	□□□□□ -1.75
LINC01088-208	ENST00000511895	MFSD7	Q6UXD7	560 aa		4.15	□□□□□ -1.75
LINC01088-208	ENST00000511895	PAMR1	Q6UXH9	720 aa		4.15	□□□□□ -1.75
LINC01088-208	ENST00000511895	SFRP1	Q8N474	314 aa		4.15	□□□□□ -1.75
LINC01088-208	ENST00000511895	ACER1	Q8TDN7	264 aa		4.15	□□□□□ -1.75
LINC01088-208	ENST00000511895	GPR137	Q96N19	417 aa		4.15	□□□□□ -1.75
LINC01088-208	ENST00000511895	GPR174	Q9BXC1	333 aa		4.15	□□□□□ -1.75
LINC01088-208	ENST00000511895	ZNF275	Q9NSD4	429 aa	Predicted RBP	4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 160.9 ms