RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 NUDT21O43809 227 aaKnown RBP3.38□□□□□ -1.87
USP53-205ENST00000509769 CREG1O75629 220 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 HAND1O96004 215 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 GHRHP01286 108 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 GLAP06280 429 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 LIPFP07098 398 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 MMP3P08254 477 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 ARP10275 920 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 FCER1AP12319 257 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 TAL1P17542 331 aaPredicted RBP3.38□□□□□ -1.87
USP53-205ENST00000509769 EPORP19235 508 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 HOXD13P35453 343 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 PBX1P40424 430 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 PBX3P40426 434 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 GSK3BP49841 420 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 RELQ04864 619 aaPredicted RBP3.38□□□□□ -1.87
USP53-205ENST00000509769 CLCQ05315 142 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 GPR50Q13585 617 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 EXT1Q16394 746 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 TIGITQ495A1 244 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 XKR6Q5GH73 641 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 OR2T2Q6IF00 324 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 MED27Q6P2C8 311 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 LCLAT1Q6UWP7 414 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 USP53Q70EK8 1073 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 SLC16A14Q7RTX9 510 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 GLT6D1Q7Z4J2 308 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 SNX29P2Q8IUI4 249 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 ZNF679Q8IYX0 411 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 ZNF101Q8IZC7 436 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 CRYBG2Q8N1P7 616 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 PARP16Q8N5Y8 322 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 HUS1BQ8NHY5 278 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 SLC5A5Q92911 643 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 PSMG2Q969U7 264 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 PINX1Q96BK5 328 aaKnown RBP3.38□□□□□ -1.87
USP53-205ENST00000509769 BIRC7Q96CA5 298 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 TMEM169Q96HH4 297 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 TMEM176AQ96HP8 235 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 OR10C1Q96KK4 312 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 ADAD1Q96M93 576 aaKnown RBP3.38□□□□□ -1.87
USP53-205ENST00000509769 TP53RKQ96S44 253 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 LHX5Q9H2C1 402 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 PRO3102Q9H379 93 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 C1orf198Q9H425 327 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 POFUT1Q9H488 388 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 OSGEPL1Q9H4B0 414 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 ANKRD19PQ9H560 264 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 ALG9Q9H6U8 611 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 MYOZ2Q9NPC6 264 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 SEMA4BQ9NPR2 832 aaPredicted RBP3.38□□□□□ -1.87
USP53-205ENST00000509769 SERINC1Q9NRX5 453 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 RBM22Q9NW64 420 aaKnown RBP eCLIP3.38□□□□□ -1.87
USP53-205ENST00000509769 OR5AC2Q9NZP5 309 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 RPH3ALQ9UNE2 315 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 FNDC3AQ9Y2H6 1198 aaKnown RBP3.38□□□□□ -1.87
USP53-205ENST00000509769 MRPL42Q9Y6G3 142 aaKnown RBP3.38□□□□□ -1.87
USP53-205ENST00000509769 ENPP4Q9Y6X5 453 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 SALL1Q9NSC2 1324 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 RIC1Q4ADV7 1423 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 CASTOR2A6NHX0 329 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 FAM74A7A6NL05 159 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 ZNF736B4DX44 427 aaPredicted RBP3.38□□□□□ -1.87
USP53-205ENST00000509769 H7C1C5 153 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 TMEM189-UBE2V1I3L0A0 370 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 M0QYT0 321 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 MANBAO00462 879 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 SIAH2O43255 324 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 EEDO75530 441 aaKnown RBP3.38□□□□□ -1.87
USP53-205ENST00000509769 PDGFBP01127 241 aaPredicted RBP3.38□□□□□ -1.87
USP53-205ENST00000509769 ESR1P03372 595 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 TYMSP04818 313 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 HLA-DQB2P05538 268 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 ASGR1P07306 291 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 RHOCP08134 193 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 SFTPCP11686 197 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 ADRA2CP18825 462 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 MMP11P24347 488 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 HOXC9P31274 260 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 GPR12P47775 334 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 PLA2G16P53816 162 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 DAOAP59103 153 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 OR2B8PP59922 312 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 ARG2P78540 354 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 TNFRSF17Q02223 184 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 BDH1Q02338 343 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 GGNBP1Q5YKI7 109 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 HBMQ6B0K9 141 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 MBOAT1Q6ZNC8 495 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 ZCCHC23Q6ZST2 131 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 PDZD3Q86UT5 571 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 SERPINA9Q86WD7 417 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 FAM156AQ8NDB6 213 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 DBF4BQ8NFT6 615 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 OR52N2Q8NGI0 321 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 OR4K15Q8NH41 348 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 C7orf43Q8WVR3 580 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 PTP4A1Q93096 173 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 TSLPQ969D9 159 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 FAM131CQ96AQ9 280 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms