RNA–Protein interactions for RNA: ENST00000509165.1

NFKB1-208, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 5

Gene NFKB1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-208ENST00000509165 AP1M1Q9BXS5 423 aa3.41□□□□□ -1.86
NFKB1-208ENST00000509165 RAB17Q9H0T7 212 aa3.41□□□□□ -1.86
NFKB1-208ENST00000509165 DHX35Q9H5Z1 703 aaKnown RBP3.41□□□□□ -1.86
NFKB1-208ENST00000509165 ZWILCHQ9H900 591 aa3.41□□□□□ -1.86
NFKB1-208ENST00000509165 VIPAS39Q9H9C1 493 aa3.41□□□□□ -1.86
NFKB1-208ENST00000509165 FAM114A2Q9NRY5 505 aa3.41□□□□□ -1.86
NFKB1-208ENST00000509165 COX16Q9P0S2 106 aa3.41□□□□□ -1.86
NFKB1-208ENST00000509165 CPSF2Q9P2I0 782 aaKnown RBP3.41□□□□□ -1.86
NFKB1-208ENST00000509165 SUN2Q9UH99 717 aa3.41□□□□□ -1.86
NFKB1-208ENST00000509165 PCSK1NQ9UHG2 260 aa3.41□□□□□ -1.86
NFKB1-208ENST00000509165 PPP1R3CQ9UQK1 317 aa3.41□□□□□ -1.86
NFKB1-208ENST00000509165 UTP11Q9Y3A2 253 aaKnown RBP3.41□□□□□ -1.86
NFKB1-208ENST00000509165 CUBNO60494 3623 aa3.41□□□□□ -1.86
NFKB1-208ENST00000509165 VPS13CQ709C8 3753 aa3.41□□□□□ -1.86
NFKB1-208ENST00000509165 POLEQ07864 2286 aa3.41□□□□□ -1.86
NFKB1-208ENST00000509165 MN1Q10571 1320 aaPredicted RBP3.41□□□□□ -1.86
NFKB1-208ENST00000509165 ABCA4P78363 2273 aa3.4□□□□□ -1.86
NFKB1-208ENST00000509165 LRRD1A4D1F6 860 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 ARHGAP42A6NI28 874 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 TMEM110-MUSTN1A8MSY1 372 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 RAD51CO43502 376 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 CST8O60676 142 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 POP4O95707 220 aaKnown RBP3.4□□□□□ -1.87
NFKB1-208ENST00000509165 LDOC1O95751 146 aaPredicted RBP3.4□□□□□ -1.87
NFKB1-208ENST00000509165 GAS8O95995 478 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 RAB40ALP0C0E4 278 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 RHOXF2BP0C7M4 288 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 NR2F1P10589 423 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 GNSP15586 552 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 IVDP26440 423 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 SERPINB6P35237 376 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 CCNHP51946 323 aaPredicted RBP3.4□□□□□ -1.87
NFKB1-208ENST00000509165 CDH6P55285 790 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 ERVPABLB-1P60509 514 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 AP1S1P61966 158 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 VSNL1P62760 191 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 GUCY2DQ02846 1103 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 CAV1Q03135 178 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 C2orf54Q08AI8 447 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 SLC10A7Q0GE19 358 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 WASHC5Q12768 1159 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 RALGDSQ12967 914 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 AKAP6Q13023 2319 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 PRKG2Q13237 762 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 MSLNQ13421 630 aaPredicted RBP3.4□□□□□ -1.87
NFKB1-208ENST00000509165 PTK6Q13882 451 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 TGIF1Q15583 401 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 CDKN3Q16667 212 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 TMEM52BQ4KMG9 183 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 FASTKD1Q53R41 847 aaKnown RBP3.4□□□□□ -1.87
NFKB1-208ENST00000509165 ODF2Q5BJF6 829 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 CARD16Q5EG05 197 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 ZNF776Q68DI1 518 aaPredicted RBP3.4□□□□□ -1.87
NFKB1-208ENST00000509165 UGT3A1Q6NUS8 523 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 NEK5Q6P3R8 708 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 SCYL2Q6P3W7 929 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 TTC27Q6P3X3 843 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 DOK6Q6PKX4 331 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 NUP54Q7Z3B4 507 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 ARHGAP22Q7Z5H3 698 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 P2RY8Q86VZ1 359 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 CCDC50Q8IVM0 306 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 MMD2Q8IY49 270 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 STK40Q8N2I9 435 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 CCDC89Q8N998 374 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 BBOF1Q8ND07 529 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 TSPAN14Q8NG11 270 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 VANGL1Q8TAA9 524 aaPredicted RBP3.4□□□□□ -1.87
NFKB1-208ENST00000509165 AENQ8WTP8 325 aaKnown RBP3.4□□□□□ -1.87
NFKB1-208ENST00000509165 SMAP2Q8WU79 429 aaPredicted RBP3.4□□□□□ -1.87
NFKB1-208ENST00000509165 PDCD6IPQ8WUM4 868 aaKnown RBP3.4□□□□□ -1.87
NFKB1-208ENST00000509165 ATL1Q8WXF7 558 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 CENPTQ96BT3 561 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 SGF29Q96ES7 293 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 GDAP1L1Q96MZ0 367 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 ZNF641Q96N77 438 aaPredicted RBP3.4□□□□□ -1.87
NFKB1-208ENST00000509165 QKIQ96PU8 341 aaKnown RBP eCLIP3.4□□□□□ -1.874e-6■■□□□ 12
NFKB1-208ENST00000509165 LYSMD1Q96S90 227 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 CCNL2Q96S94 520 aaPredicted RBP3.4□□□□□ -1.87
NFKB1-208ENST00000509165 KLF6Q99612 283 aaPredicted RBP3.4□□□□□ -1.87
NFKB1-208ENST00000509165 C19orf43Q9BQ61 176 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 RHOXF2Q9BQY4 288 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 FUT8Q9BYC5 575 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 DDX47Q9H0S4 455 aaKnown RBP3.4□□□□□ -1.87
NFKB1-208ENST00000509165 SGK2Q9HBY8 427 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 HAO2Q9NYQ3 351 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 NFKBIL1Q9UBC1 381 aaPredicted RBP3.4□□□□□ -1.87
NFKB1-208ENST00000509165 PLA2G4CQ9UP65 541 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 MOB4Q9Y3A3 225 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 TMED3Q9Y3Q3 217 aa3.4□□□□□ -1.87
NFKB1-208ENST00000509165 V9GYY5 206 aaPredicted RBP3.4□□□□□ -1.87
NFKB1-208ENST00000509165 CNTRLQ7Z7A1 2325 aa3.39□□□□□ -1.87
NFKB1-208ENST00000509165 HACD1B0YJ81 288 aa3.39□□□□□ -1.87
NFKB1-208ENST00000509165 EPM2AB3EWF7 344 aa3.39□□□□□ -1.87
NFKB1-208ENST00000509165 TTI1O43156 1089 aa3.39□□□□□ -1.87
NFKB1-208ENST00000509165 MAGEC1O60732 1142 aa3.39□□□□□ -1.87
NFKB1-208ENST00000509165 HLA-DQB2P05538 268 aa3.39□□□□□ -1.87
NFKB1-208ENST00000509165 UGT1A4P22310 534 aa3.39□□□□□ -1.87
NFKB1-208ENST00000509165 TEAD1P28347 426 aa3.39□□□□□ -1.87
NFKB1-208ENST00000509165 OXTRP30559 389 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms