RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 EBF3Q9H4W6 596 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 TXNRD2Q9NNW7 524 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 KRCC1Q9NPI7 259 aaPredicted RBP3.65□□□□□ -1.83
NEDD4-209ENST00000508871 AGPAT4Q9NRZ5 378 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 NOCTQ9UK39 431 aaKnown RBP3.65□□□□□ -1.83
NEDD4-209ENST00000508871 SNX12Q9UMY4 172 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 RASD1Q9Y272 281 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 TRAV8-7A0A075B6U6 113 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 A0A0A6YYJ9 748 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 ILVBLA1L0T0 632 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 NPIPB5A8MRT5 1133 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 AIREO43918 545 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 PAEPP09466 180 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 SMIM18P0DKX4 95 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 H2AFXP16104 143 aaPredicted RBP3.65□□□□□ -1.83
NEDD4-209ENST00000508871 GOT1P17174 413 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 MMP11P24347 488 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 RPS9P46781 194 aaKnown RBP3.65□□□□□ -1.83
NEDD4-209ENST00000508871 CHN2P52757 468 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 ERVK-8P63133 956 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 QPRTQ15274 297 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 ZNF470Q6ECI4 717 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 KLHDC8AQ8IYD2 350 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 RAB42Q8N4Z0 105 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 SPPL2AQ8TCT8 520 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 C22orf15Q8WYQ4 148 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 NPIPB3Q92617 1050 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 ASB7Q9H672 318 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 ANKRA2Q9H9E1 313 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 HINT3Q9NQE9 182 aaKnown RBP3.65□□□□□ -1.83
NEDD4-209ENST00000508871 C19orf12Q9NSK7 152 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 SLC38A7Q9NVC3 462 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 TAS2R9Q9NYW1 312 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 TAS2R1Q9NYW7 299 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 CNOT2Q9NZN8 540 aaKnown RBP3.65□□□□□ -1.83
NEDD4-209ENST00000508871 NCKIPSDQ9NZQ3 722 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 PTGFRNQ9P2B2 879 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 SERGEFQ9UGK8 458 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 CRLS1Q9UJA2 301 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 GNG8Q9UK08 70 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 RAI2Q9Y5P3 530 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 CDH10Q9Y6N8 788 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 MYADML2A6NDP7 307 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 FAM170BA6NMN3 283 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 H0Y980 276 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 CLIC1O00299 241 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 CHEK1O14757 476 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 EPXP11678 715 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 ZNF7P17097 686 aaPredicted RBP3.65□□□□□ -1.83
NEDD4-209ENST00000508871 GRPRP30550 384 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 MAGEA3P43357 314 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 XKP51811 444 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 FAM3BP58499 235 aaPredicted RBP3.65□□□□□ -1.83
NEDD4-209ENST00000508871 SLC10A7Q0GE19 358 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 MST1LQ2TV78 715 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 C22orf42Q6IC83 251 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 METTL2BQ6P1Q9 378 aaKnown RBP3.65□□□□□ -1.83
NEDD4-209ENST00000508871 DOK3Q7L591 496 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 EID3Q8N140 333 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 ZSCAN4Q8NAM6 433 aaPredicted RBP3.65□□□□□ -1.83
NEDD4-209ENST00000508871 OR6N2Q8NGY6 317 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 WDR36Q8NI36 951 aaKnown RBP3.65□□□□□ -1.83
NEDD4-209ENST00000508871 OR51E1Q8TCB6 317 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 PLEKHA8Q96JA3 519 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 C4orf36Q96KX1 117 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 HDAC8Q9BY41 377 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 BARHL1Q9BZE3 327 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 STRADBQ9C0K7 418 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 PITHD1Q9GZP4 211 aaPredicted RBP3.65□□□□□ -1.83
NEDD4-209ENST00000508871 PRR13Q9NZ81 148 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 HSPB7Q9UBY9 170 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 TMEM202A6NGA9 273 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 PRR33A8MZF0 331 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 M0QZ24 198 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 ANGPTL1O95841 491 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 SNAI1O95863 264 aaPredicted RBP3.64□□□□□ -1.83
NEDD4-209ENST00000508871 IDO1P14902 403 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 WDR5P61964 334 aaKnown RBP3.64□□□□□ -1.83
NEDD4-209ENST00000508871 RING1Q06587 406 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 MRPL23Q16540 153 aaKnown RBP3.64□□□□□ -1.83
NEDD4-209ENST00000508871 LRRC37A5PQ49AS3 106 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 SLC22A6Q4U2R8 563 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 LIPJQ5W064 366 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 CACUL1Q86Y37 369 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 RAB43Q86YS6 212 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 Q8N402 240 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 CBR4Q8N4T8 237 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 ZNF561Q8N587 486 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 KDF1Q8NAX2 398 aaPredicted RBP3.64□□□□□ -1.83
NEDD4-209ENST00000508871 OR6K6Q8NGW6 343 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 NEK7Q8TDX7 302 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 TCEAL4Q96EI5 215 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 Q96MT0 163 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 MRPS30Q9NP92 439 aaKnown RBP3.64□□□□□ -1.83
NEDD4-209ENST00000508871 ACOXLQ9NUZ1 547 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 P4HTMQ9NXG6 502 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 SLC17A7Q9P2U7 560 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 POMT2Q9UKY4 750 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 GUCA1BQ9UMX6 200 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 COL4A6Q14031 1691 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms