RNA–Protein interactions for RNA: ENST00000508740.5

NR1I3-226, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-226ENST00000508740 SLC7A5P2Q9GIP4 190 aa7.35□□□□□ -1.23
NR1I3-226ENST00000508740 TGIF2Q9GZN2 237 aa7.35□□□□□ -1.23
NR1I3-226ENST00000508740 CCDC90BQ9GZT6 254 aa7.35□□□□□ -1.23
NR1I3-226ENST00000508740 SYNDIG1Q9H7V2 258 aa7.35□□□□□ -1.23
NR1I3-226ENST00000508740 SLC22A11Q9NSA0 550 aa7.35□□□□□ -1.23
NR1I3-226ENST00000508740 PLCXD1Q9NUJ7 323 aa7.35□□□□□ -1.23
NR1I3-226ENST00000508740 IMPAD1Q9NX62 359 aa7.35□□□□□ -1.23
NR1I3-226ENST00000508740 ERVK-18Q9QC07 812 aa7.35□□□□□ -1.23
NR1I3-226ENST00000508740 RARRES3Q9UL19 164 aa7.35□□□□□ -1.23
NR1I3-226ENST00000508740 CFL2Q9Y281 166 aa7.35□□□□□ -1.23
NR1I3-226ENST00000508740 PCDHGB1Q9Y5G3 927 aa7.35□□□□□ -1.23
NR1I3-226ENST00000508740 CLCA3PQ9Y6N3 262 aa7.35□□□□□ -1.23
NR1I3-226ENST00000508740 ZZEF1O43149 2961 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 IGLV3-12A0A075B6K2 115 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 SH3D21A4FU49 640 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 TRAPPC13A5PLN9 417 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 SYNDIG1LA6NDD5 238 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 H3BN98 237 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 NTN3O00634 580 aaPredicted RBP7.34□□□□□ -1.23
NR1I3-226ENST00000508740 RGS10O43665 173 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 BCAS1O75363 584 aaPredicted RBP7.34□□□□□ -1.23
NR1I3-226ENST00000508740 SEC14L2O76054 403 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 LYPD3O95274 346 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 SOX14O95416 240 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 ONECUT2O95948 504 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 AVPP01185 164 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 IGKV3-11P04433 115 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 PRG2P13727 222 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 ITIH1P19827 911 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 PCMT1P22061 227 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 GSTT1P30711 240 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 KRT20P35900 424 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 STAT5AP42229 794 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 PPICP45877 212 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 OMPP47874 163 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 GIPRP48546 466 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 RNF144AP50876 292 aaPredicted RBP7.34□□□□□ -1.23
NR1I3-226ENST00000508740 ATP12AP54707 1039 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 SNRPGP62308 76 aaKnown RBP7.34□□□□□ -1.23
NR1I3-226ENST00000508740 TSPAN31Q12999 210 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 FGFBP1Q14512 234 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 GINS1Q14691 196 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 OR1Q1Q15612 314 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 NSDHLQ15738 373 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 LPAL2Q16609 132 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 STPG1Q5TH74 334 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 C12orf73Q69YU5 71 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 GTF2IRD2BQ6EKJ0 949 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 PWWP2BQ6NUJ5 590 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 COX15Q7KZN9 410 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 RRM2BQ7LG56 351 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 GTF2IRD2Q86UP8 949 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 MEX3DQ86XN8 651 aaKnown RBP7.34□□□□□ -1.23
NR1I3-226ENST00000508740 CLVS1Q8IUQ0 354 aaPredicted RBP7.34□□□□□ -1.23
NR1I3-226ENST00000508740 GRAMD2AQ8IUY3 354 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 P3H2Q8IVL5 708 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 NKAIN4Q8IVV8 208 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 CCDC103Q8IW40 242 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 PRSS58Q8IYP2 241 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 ZNF321PQ8N8H1 164 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 SLC38A9Q8NBW4 561 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 ZNF540Q8NDQ6 660 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 OR14A16Q8NHC5 309 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 SLC2A12Q8TD20 617 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 ZNF721Q8TF20 911 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 TRUB1Q8WWH5 349 aaKnown RBP7.34□□□□□ -1.23
NR1I3-226ENST00000508740 CNOT9Q92600 299 aaKnown RBP7.34□□□□□ -1.23
NR1I3-226ENST00000508740 GGHQ92820 318 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 DAZLQ92904 295 aaKnown RBP7.34□□□□□ -1.23
NR1I3-226ENST00000508740 SLC35B4Q969S0 331 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 NMD3Q96D46 503 aaKnown RBP7.34□□□□□ -1.23
NR1I3-226ENST00000508740 CLIP3Q96DZ5 547 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 GFM1Q96RP9 751 aaKnown RBP7.34□□□□□ -1.23
NR1I3-226ENST00000508740 TSC22D3Q99576 134 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 PRSS27Q9BQR3 290 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 ZNF559Q9BR84 538 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 OR8D2Q9GZM6 311 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 VN1R1Q9GZP7 353 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 HOXD1Q9GZZ0 328 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 TMEM27Q9HBJ8 222 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 CCNB1IP1Q9NPC3 277 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 FKBP14Q9NWM8 211 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 SIDT1Q9NXL6 827 aaKnown RBP7.34□□□□□ -1.23
NR1I3-226ENST00000508740 RSL24D1Q9UHA3 163 aaKnown RBP7.34□□□□□ -1.23
NR1I3-226ENST00000508740 PSORS1C1Q9UIG5 152 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 MKL2Q9ULH7 1088 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 OR10H1Q9Y4A9 318 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 COMMD3-BMI1R4GMX3 469 aa7.34□□□□□ -1.23
NR1I3-226ENST00000508740 IGF2RP11717 2491 aa7.34□□□□□ -1.24
NR1I3-226ENST00000508740 UNC13CQ8NB66 2214 aa7.33□□□□□ -1.24
NR1I3-226ENST00000508740 FRYQ5TBA9 3013 aa7.33□□□□□ -1.24
NR1I3-226ENST00000508740 FRG2CA6NGY1 282 aa7.33□□□□□ -1.24
NR1I3-226ENST00000508740 SERINC4A6NH21 518 aa7.33□□□□□ -1.24
NR1I3-226ENST00000508740 ZNF701M0R085 212 aaPredicted RBP7.33□□□□□ -1.24
NR1I3-226ENST00000508740 AGRPO00253 132 aa7.33□□□□□ -1.24
NR1I3-226ENST00000508740 KHNYNO15037 678 aaKnown RBP7.33□□□□□ -1.24
NR1I3-226ENST00000508740 POLR1CO15160 346 aaPredicted RBP7.33□□□□□ -1.24
NR1I3-226ENST00000508740 KLF4O43474 513 aa7.33□□□□□ -1.24
NR1I3-226ENST00000508740 SCRG1O75711 98 aa7.33□□□□□ -1.24
NR1I3-226ENST00000508740 TIAF1O95411 115 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms