RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 MPPED2Q15777 294 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 TRIM16LQ309B1 348 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 PROX2Q3B8N5 592 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 NKAIN1Q4KMZ8 207 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 DEFB134Q4QY38 66 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 IDNKQ5T6J7 187 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 MANEALQ5VSG8 457 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 PRAMEF20Q5VT98 475 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 TNFAIP8L2Q6P589 184 aaPredicted RBP2.77□□□□□ -1.97
NEDD4-208ENST00000508342 SLC22A25Q6T423 547 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 OPN5Q6U736 354 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 CPEB2Q7Z5Q1 589 aaKnown RBP2.77□□□□□ -1.97
NEDD4-208ENST00000508342 SLC34A3Q8N130 599 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 MFSD9Q8NBP5 474 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 OR52E4Q8NGH9 312 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 ASB5Q8WWX0 329 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 DNAJA3Q96EY1 480 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 MED30Q96HR3 178 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 MRGPRX2Q96LB1 330 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 AGAP2Q99490 1192 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 PITX2Q99697 317 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 CENPOQ9BU64 300 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 RBM24Q9BX46 236 aaKnown RBP2.77□□□□□ -1.97
NEDD4-208ENST00000508342 FAM120CQ9NX05 1096 aaKnown RBP2.77□□□□□ -1.97
NEDD4-208ENST00000508342 P2RX2Q9UBL9 471 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 GRHPRQ9UBQ7 328 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 AASSQ9UDR5 926 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 ZNF639Q9UID6 485 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 ARFGEF3Q5TH69 2177 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 CACNA1IQ9P0X4 2223 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 OR6C76A6NM76 312 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 MANBAO00462 879 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 OXSR1O95747 527 aaPredicted RBP2.76□□□□□ -1.97
NEDD4-208ENST00000508342 CSTAP01040 98 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 PRPS2P11908 318 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 TPSB2P20231 275 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 HTR1EP28566 365 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 GALNSP34059 522 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 SFTPDP35247 375 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 RFC3P40938 356 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 STT3AP46977 705 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 DSTNP60981 165 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 HES1Q14469 280 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 KPNB1Q14974 876 aaKnown RBP2.76□□□□□ -1.97
NEDD4-208ENST00000508342 TPSAB1Q15661 275 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 SLC36A3Q495N2 470 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 TMEM215Q68D42 235 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 ARCQ7LC44 396 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 HIPK1Q86Z02 1210 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 FAM169BQ8N8A8 192 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 DOK4Q8TEW6 326 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 S100PBPQ96BU1 408 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 CDKN2AIPNLQ96HQ2 116 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 SCGB3A2Q96PL1 93 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 CHCHD6Q9BRQ6 235 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 TMEM79Q9BSE2 394 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 SLC5A7Q9GZV3 580 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 LIN7BQ9HAP6 207 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 PRDM9Q9NQV7 894 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 NUDT15Q9NV35 164 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 ICKQ9UPZ9 632 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 CBY1Q9Y3M2 126 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 WDR45Q9Y484 360 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 CACNA1DQ01668 2161 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 LOC101059948A0A1B0GTJ6 334 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 K7EPI3 171 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 LDB3O75112 727 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 CBX7O95931 251 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 BCL10O95999 233 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 CST1P01037 141 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 IFNA21P01568 189 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 IGHV4-34P06331 123 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 LHCGRP22888 699 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 CERS1P27544 350 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 CASP3P42574 277 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 GBX2P52951 348 aaPredicted RBP2.76□□□□□ -1.97
NEDD4-208ENST00000508342 OR12D2P58182 307 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 ZNF460Q14592 562 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 EIF2S3LQ2VIR3 472 aaKnown RBP2.76□□□□□ -1.97
NEDD4-208ENST00000508342 SPIN4Q56A73 249 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 C1orf185Q5T7R7 199 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 RIPPLY2Q5TAB7 128 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 AGBL2Q5U5Z8 902 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 SLC22A10Q63ZE4 541 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 MRPL21Q7Z2W9 205 aaKnown RBP2.76□□□□□ -1.97
NEDD4-208ENST00000508342 GALNT5Q7Z7M9 940 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 CD163Q86VB7 1156 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 TICAM1Q8IUC6 712 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 CREG2Q8IUH2 290 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 SLC22A18ASQ8N1D0 253 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 WDTC1Q8N5D0 677 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 JAGN1Q8N5M9 183 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 RNF148Q8N7C7 305 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 AMER2Q8N7J2 671 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 SCCPDHQ8NBX0 429 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 TNFAIP8L1Q8WVP5 186 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 PTCD3Q96EY7 689 aaKnown RBP2.76□□□□□ -1.97
NEDD4-208ENST00000508342 BOD1Q96IK1 185 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 BMFQ96LC9 184 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 BEX2Q9BXY8 128 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms