RNA–Protein interactions for RNA: ENST00000508049.1

CLOCK-207, Transcript of clock circadian regulator, humanhuman

TSL 3

Gene CLOCK, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-207ENST00000508049 DKC1O60832 514 aaKnown RBP eCLIP1.26□□□□□ -2.21
CLOCK-207ENST00000508049 STK17BO94768 372 aa1.26□□□□□ -2.21
CLOCK-207ENST00000508049 MOSP00540 346 aa1.26□□□□□ -2.21
CLOCK-207ENST00000508049 CISD3P0C7P0 127 aa1.26□□□□□ -2.21
CLOCK-207ENST00000508049 PNMA6AP0CW24 399 aaPredicted RBP1.26□□□□□ -2.21
CLOCK-207ENST00000508049 FERP16591 822 aa1.26□□□□□ -2.21
CLOCK-207ENST00000508049 EMDP50402 254 aa1.26□□□□□ -2.21
CLOCK-207ENST00000508049 SMSP52788 366 aa1.26□□□□□ -2.21
CLOCK-207ENST00000508049 CRISP3P54108 245 aa1.26□□□□□ -2.21
CLOCK-207ENST00000508049 NLRP11P59045 1033 aaKnown RBP1.26□□□□□ -2.21
CLOCK-207ENST00000508049 KBTBD12Q3ZCT8 623 aa1.26□□□□□ -2.21
CLOCK-207ENST00000508049 ANKRD20A4Q4UJ75 823 aa1.26□□□□□ -2.21
CLOCK-207ENST00000508049 ANKRD20A2Q5SQ80 823 aa1.26□□□□□ -2.21
CLOCK-207ENST00000508049 FAM120AOSQ5T036 256 aa1.26□□□□□ -2.21
CLOCK-207ENST00000508049 ANKRD20A1Q5TYW2 823 aa1.26□□□□□ -2.21
CLOCK-207ENST00000508049 ANKRD20A3Q5VUR7 823 aa1.26□□□□□ -2.21
CLOCK-207ENST00000508049 PNKDQ8N490 385 aa1.26□□□□□ -2.21
CLOCK-207ENST00000508049 AP1M1Q9BXS5 423 aa1.26□□□□□ -2.21
CLOCK-207ENST00000508049 ZCCHC3Q9NUD5 404 aaKnown RBP1.26□□□□□ -2.21
CLOCK-207ENST00000508049 AIG1Q9NVV5 245 aa1.26□□□□□ -2.21
CLOCK-207ENST00000508049 RIMS3Q9UJD0 308 aa1.26□□□□□ -2.21
CLOCK-207ENST00000508049 UGT2A1Q9Y4X1 527 aa1.26□□□□□ -2.21
CLOCK-207ENST00000508049 H7C0S8 307 aa1.25□□□□□ -2.21
CLOCK-207ENST00000508049 CACNB4O00305 520 aaPredicted RBP1.25□□□□□ -2.21
CLOCK-207ENST00000508049 GIPP09681 153 aaPredicted RBP1.25□□□□□ -2.21
CLOCK-207ENST00000508049 RNH1P13489 461 aaKnown RBP1.25□□□□□ -2.21
CLOCK-207ENST00000508049 GDI1P31150 447 aa1.25□□□□□ -2.21
CLOCK-207ENST00000508049 ST3GAL3Q11203 375 aa1.25□□□□□ -2.21
CLOCK-207ENST00000508049 DNLZQ5SXM8 178 aa1.25□□□□□ -2.21
CLOCK-207ENST00000508049 PRAMEF8Q5VWM4 474 aa1.25□□□□□ -2.21
CLOCK-207ENST00000508049 NANOGP8Q6NSW7 305 aa1.25□□□□□ -2.21
CLOCK-207ENST00000508049 BTNL3Q6UXE8 466 aa1.25□□□□□ -2.21
CLOCK-207ENST00000508049 Q6ZR03 302 aa1.25□□□□□ -2.21
CLOCK-207ENST00000508049 TMEM26Q6ZUK4 368 aa1.25□□□□□ -2.21
CLOCK-207ENST00000508049 BNIPLQ7Z465 357 aa1.25□□□□□ -2.21
CLOCK-207ENST00000508049 CERS3Q8IU89 383 aa1.25□□□□□ -2.21
CLOCK-207ENST00000508049 CCDC36Q8IYA8 594 aa1.25□□□□□ -2.21
CLOCK-207ENST00000508049 OR52P1PQ8NH57 321 aa1.25□□□□□ -2.21
CLOCK-207ENST00000508049 TEX13AQ9BXU3 409 aaPredicted RBP1.25□□□□□ -2.21
CLOCK-207ENST00000508049 SRXN1Q9BYN0 137 aa1.25□□□□□ -2.21
CLOCK-207ENST00000508049 FAM124BQ9H5Z6 455 aaPredicted RBP1.25□□□□□ -2.21
CLOCK-207ENST00000508049 GGA2Q9UJY4 613 aa1.25□□□□□ -2.21
CLOCK-207ENST00000508049 TENM1Q9UKZ4 2725 aa1.25□□□□□ -2.21
CLOCK-207ENST00000508049 SHANK1Q9Y566 2161 aa1.24□□□□□ -2.21
CLOCK-207ENST00000508049 PIKFYVEQ9Y2I7 2098 aa1.24□□□□□ -2.21
CLOCK-207ENST00000508049 SLITRK3O94933 977 aa1.24□□□□□ -2.21
CLOCK-207ENST00000508049 TMOD1P28289 359 aa1.24□□□□□ -2.21
CLOCK-207ENST00000508049 RPL8P62917 257 aaKnown RBP1.24□□□□□ -2.21
CLOCK-207ENST00000508049 PSG5Q15238 335 aa1.24□□□□□ -2.21
CLOCK-207ENST00000508049 CDKN3Q16667 212 aa1.24□□□□□ -2.21
CLOCK-207ENST00000508049 ZNF880Q6PDB4 577 aa1.24□□□□□ -2.21
CLOCK-207ENST00000508049 C6orf89Q6UWU4 347 aa1.24□□□□□ -2.21
CLOCK-207ENST00000508049 GDPD3Q7L5L3 318 aa1.24□□□□□ -2.21
CLOCK-207ENST00000508049 ARCQ7LC44 396 aa1.24□□□□□ -2.21
CLOCK-207ENST00000508049 NAT8LQ8N9F0 302 aa1.24□□□□□ -2.21
CLOCK-207ENST00000508049 TMEM45BQ96B21 275 aa1.24□□□□□ -2.21
CLOCK-207ENST00000508049 NPAS2Q99743 824 aa1.24□□□□□ -2.21
CLOCK-207ENST00000508049 PAK1IP1Q9NWT1 392 aaPredicted RBP1.24□□□□□ -2.21
CLOCK-207ENST00000508049 GHRLQ9UBU3 117 aa1.24□□□□□ -2.21
CLOCK-207ENST00000508049 SHROOM3Q8TF72 1996 aa1.24□□□□□ -2.21
CLOCK-207ENST00000508049 NPC1L1Q9UHC9 1359 aa1.23□□□□□ -2.21
CLOCK-207ENST00000508049 TLR4O00206 839 aa1.23□□□□□ -2.21
CLOCK-207ENST00000508049 ATP6V1G1O75348 118 aa1.23□□□□□ -2.21
CLOCK-207ENST00000508049 TRIM3O75382 744 aaPredicted RBP1.23□□□□□ -2.21
CLOCK-207ENST00000508049 TNFSF13O75888 250 aa1.23□□□□□ -2.21
CLOCK-207ENST00000508049 TGDSO95455 350 aa1.23□□□□□ -2.21
CLOCK-207ENST00000508049 SYNGR4O95473 234 aa1.23□□□□□ -2.21
CLOCK-207ENST00000508049 VCLP18206 1134 aa1.23□□□□□ -2.21
CLOCK-207ENST00000508049 EPHX2P34913 555 aa1.23□□□□□ -2.21
CLOCK-207ENST00000508049 TSPY1Q01534 308 aa1.23□□□□□ -2.21
CLOCK-207ENST00000508049 SRYQ05066 204 aa1.23□□□□□ -2.21
CLOCK-207ENST00000508049 LEG1Q6P5S2 330 aa1.23□□□□□ -2.21
CLOCK-207ENST00000508049 OR8H1Q8NGG4 311 aa1.23□□□□□ -2.21
CLOCK-207ENST00000508049 SELENOMQ8WWX9 145 aa1.23□□□□□ -2.21
CLOCK-207ENST00000508049 EDEM3Q9BZQ6 932 aa1.23□□□□□ -2.21
CLOCK-207ENST00000508049 COG4Q9H9E3 785 aa1.23□□□□□ -2.21
CLOCK-207ENST00000508049 PLGRKTQ9HBL7 147 aa1.23□□□□□ -2.21
CLOCK-207ENST00000508049 IL1RAPL2Q9NP60 686 aa1.23□□□□□ -2.21
CLOCK-207ENST00000508049 PLLPQ9Y342 182 aa1.23□□□□□ -2.21
CLOCK-207ENST00000508049 LOC100131303A0A0U1RQF7 123 aa1.22□□□□□ -2.21
CLOCK-207ENST00000508049 C7orf66A4D0T2 115 aa1.22□□□□□ -2.21
CLOCK-207ENST00000508049 ZNF705EA8MWA4 302 aaPredicted RBP1.22□□□□□ -2.21
CLOCK-207ENST00000508049 RPL36A-HNRNPH2H7BZ11 118 aa1.22□□□□□ -2.21
CLOCK-207ENST00000508049 ANGPTL7O43827 346 aa1.22□□□□□ -2.21
CLOCK-207ENST00000508049 NMUP48645 174 aa1.22□□□□□ -2.21
CLOCK-207ENST00000508049 EFNB2P52799 333 aa1.22□□□□□ -2.21
CLOCK-207ENST00000508049 SNU13P55769 128 aaKnown RBP1.22□□□□□ -2.21
CLOCK-207ENST00000508049 NUCB1Q02818 461 aa1.22□□□□□ -2.21
CLOCK-207ENST00000508049 ZP4Q12836 540 aa1.22□□□□□ -2.21
CLOCK-207ENST00000508049 BTG3Q14201 252 aaPredicted RBP1.22□□□□□ -2.21
CLOCK-207ENST00000508049 UBE2SQ16763 222 aa1.22□□□□□ -2.21
CLOCK-207ENST00000508049 PARP6Q2NL67 630 aa1.22□□□□□ -2.21
CLOCK-207ENST00000508049 IFI44LQ53G44 452 aa1.22□□□□□ -2.21
CLOCK-207ENST00000508049 ATF7IP2Q5U623 682 aa1.22□□□□□ -2.21
CLOCK-207ENST00000508049 B3GLCTQ6Y288 498 aa1.22□□□□□ -2.21
CLOCK-207ENST00000508049 AMZ2Q86W34 360 aa1.22□□□□□ -2.21
CLOCK-207ENST00000508049 OR8H2Q8N162 312 aa1.22□□□□□ -2.21
CLOCK-207ENST00000508049 CCDC51Q96ER9 411 aa1.22□□□□□ -2.21
CLOCK-207ENST00000508049 KCNA7Q96RP8 456 aa1.22□□□□□ -2.21
CLOCK-207ENST00000508049 DMAP1Q9NPF5 467 aaPredicted RBP1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms