RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 GABARAPO95166 117 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 CLDN14O95500 239 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 CRYZL1O95825 349 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 IGHG3P01860 377 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 P04436 131 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 KLK1P06870 262 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 SNRPB2P08579 225 aaKnown RBP7.37□□□□□ -1.23
SCN1A-207ENST00000507401 TFPTP0C1Z6 253 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 NR2F6P10588 404 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 HSD3B1P14060 373 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 TCN1P20061 433 aaPredicted RBP7.37□□□□□ -1.23
SCN1A-207ENST00000507401 HSD3B2P26439 372 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 HTR1EP28566 365 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 S100A5P33763 92 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 PTGER1P34995 402 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 PTGER4P35408 488 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 ARL1P40616 181 aaPredicted RBP7.37□□□□□ -1.23
SCN1A-207ENST00000507401 MRPL19P49406 292 aaKnown RBP7.37□□□□□ -1.23
SCN1A-207ENST00000507401 XKP51811 444 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 TPTEP56180 551 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 SLC37A1P57057 533 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 GPR85P60893 370 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 PPIAP62937 165 aaKnown RBP7.37□□□□□ -1.23
SCN1A-207ENST00000507401 TRA2BP62995 288 aaKnown RBP7.37□□□□□ -1.23
SCN1A-207ENST00000507401 ADARB1P78563 741 aaKnown RBP7.37□□□□□ -1.23
SCN1A-207ENST00000507401 CLCQ05315 142 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 FUT7Q11130 342 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 DOC2BQ14184 412 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 GK3PQ14409 553 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 ZNF267Q14586 743 aaPredicted RBP7.37□□□□□ -1.23
SCN1A-207ENST00000507401 ZNF750Q32MQ0 723 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 CES4AQ5XG92 561 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 C8orf82Q6P1X6 216 aaPredicted RBP7.37□□□□□ -1.23
SCN1A-207ENST00000507401 DGAT2L6Q6ZPD8 337 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 IDO2Q6ZQW0 420 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 SLC29A4Q7RTT9 530 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 THAP5Q7Z6K1 395 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 SLC51BQ86UW2 128 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 SLC22A9Q8IVM8 553 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 C9orf40Q8IXQ3 194 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 TAGAPQ8N103 731 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 CBR4Q8N4T8 237 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 OR7A2PQ8NGA2 310 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 OR52N2Q8NGI0 321 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 PAQR8Q8TEZ7 354 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 ZNF566Q969W8 418 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 SDCCAG3Q96C92 435 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 CEP19Q96LK0 163 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 DACH2Q96NX9 599 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 DMRTA2Q96SC8 542 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 CIB1Q99828 191 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 GON7Q9BXV9 100 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 TP63Q9H3D4 680 aaPredicted RBP7.37□□□□□ -1.23
SCN1A-207ENST00000507401 SEMA4BQ9NPR2 832 aaPredicted RBP7.37□□□□□ -1.23
SCN1A-207ENST00000507401 CNIH4Q9P003 139 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 TMEM216Q9P0N5 145 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 ABCD2Q9UBJ2 740 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 TRPS1Q9UHF7 1281 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 SH3BGRL2Q9UJC5 107 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 MKLN1Q9UL63 735 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 APCP25054 2843 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 C2orf92A0A1B0GVN3 265 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 PINLYPA6NC86 204 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 GLOD5A6NK44 160 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 HRKO00198 91 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 PPP6CO00743 305 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 BCKDKO14874 412 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 ANGPT2O15123 496 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 CFLARO15519 480 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 SUSD5O60279 629 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 DLX3O60479 287 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 TRIM3O75382 744 aaPredicted RBP7.36□□□□□ -1.23
SCN1A-207ENST00000507401 ULK1O75385 1050 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 PRKRAO75569 313 aaKnown RBP7.36□□□□□ -1.23
SCN1A-207ENST00000507401 UPK1BO75841 260 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 RGS9O75916 674 aaPredicted RBP7.36□□□□□ -1.23
SCN1A-207ENST00000507401 NADKO95544 446 aaPredicted RBP7.36□□□□□ -1.23
SCN1A-207ENST00000507401 AIFM1O95831 613 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 PDYNP01213 254 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 GBAP04062 536 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 HOXD4P09016 255 aaPredicted RBP7.36□□□□□ -1.23
SCN1A-207ENST00000507401 CPMP14384 443 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 ZNF182P17025 639 aaPredicted RBP7.36□□□□□ -1.23
SCN1A-207ENST00000507401 NAGAP17050 411 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 ATP5F1P24539 256 aaPredicted RBP7.36□□□□□ -1.23
SCN1A-207ENST00000507401 RFC3P40938 356 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 OPRL1P41146 370 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 MAPK12P53778 367 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 CDH13P55290 713 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 CXCR4P61073 352 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 ERVK-8P63133 956 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 CSNK2BP67870 215 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 HSF1Q00613 529 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 PLGLB1Q02325 96 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 FOXO1Q12778 655 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 MAP4K2Q12851 820 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 CSTF3Q12996 717 aaKnown RBP7.36□□□□□ -1.23
SCN1A-207ENST00000507401 FADDQ13158 208 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 SLC10A1Q14973 349 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 GXYLT1Q4G148 440 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms