RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 CFLARO15519 480 aa12.94□□□□□ -0.34
HMGCS1-203ENST00000507004 TYROBPO43914 113 aa12.94□□□□□ -0.34
HMGCS1-203ENST00000507004 EIF4E2O60573 245 aaKnown RBP12.94□□□□□ -0.34
HMGCS1-203ENST00000507004 SERPINE1P05121 402 aa12.94□□□□□ -0.34
HMGCS1-203ENST00000507004 TUBBP07437 444 aa12.94□□□□□ -0.34
HMGCS1-203ENST00000507004 MYZAPP0CAP1 466 aa12.94□□□□□ -0.34
HMGCS1-203ENST00000507004 PSMA4P25789 261 aaKnown RBP12.94□□□□□ -0.34
HMGCS1-203ENST00000507004 ETV4P43268 484 aa12.94□□□□□ -0.34
HMGCS1-203ENST00000507004 CLDN8P56748 225 aa12.94□□□□□ -0.34
HMGCS1-203ENST00000507004 ADAM8P78325 824 aa12.94□□□□□ -0.34
HMGCS1-203ENST00000507004 PTGR1Q14914 329 aa12.94□□□□□ -0.34
HMGCS1-203ENST00000507004 RNPS1Q15287 305 aaKnown RBP12.94□□□□□ -0.34
HMGCS1-203ENST00000507004 DCST2Q5T1A1 773 aa12.94□□□□□ -0.34
HMGCS1-203ENST00000507004 HBMQ6B0K9 141 aa12.94□□□□□ -0.34
HMGCS1-203ENST00000507004 PLXDC2Q6UX71 529 aa12.94□□□□□ -0.34
HMGCS1-203ENST00000507004 ZCCHC23Q6ZST2 131 aa12.94□□□□□ -0.34
HMGCS1-203ENST00000507004 ZNF610Q8N9Z0 462 aa12.94□□□□□ -0.34
HMGCS1-203ENST00000507004 OR7A2PQ8NGA2 310 aa12.94□□□□□ -0.34
HMGCS1-203ENST00000507004 FBXO30Q8TB52 745 aa12.94□□□□□ -0.34
HMGCS1-203ENST00000507004 PHOSPHO1Q8TCT1 267 aa12.94□□□□□ -0.34
HMGCS1-203ENST00000507004 AGR3Q8TD06 166 aa12.94□□□□□ -0.34
HMGCS1-203ENST00000507004 CDS1Q92903 461 aa12.94□□□□□ -0.34
HMGCS1-203ENST00000507004 KLHL15Q96M94 604 aa12.94□□□□□ -0.34
HMGCS1-203ENST00000507004 RNF145Q96MT1 663 aa12.94□□□□□ -0.34
HMGCS1-203ENST00000507004 WFIKKN1Q96NZ8 548 aa12.94□□□□□ -0.34
HMGCS1-203ENST00000507004 ZDHHC2Q9UIJ5 367 aa12.94□□□□□ -0.34
HMGCS1-203ENST00000507004 AKAP9Q99996 3911 aa12.94□□□□□ -0.34
HMGCS1-203ENST00000507004 ITPR3Q14573 2671 aa12.93□□□□□ -0.34
HMGCS1-203ENST00000507004 FAM171A2A8MVW0 826 aa12.93□□□□□ -0.34
HMGCS1-203ENST00000507004 H0YC42 278 aa12.93□□□□□ -0.34
HMGCS1-203ENST00000507004 GTPBP1O00178 669 aaKnown RBP12.93□□□□□ -0.34
HMGCS1-203ENST00000507004 RGS16O15492 202 aaPredicted RBP12.93□□□□□ -0.34
HMGCS1-203ENST00000507004 SKAP2O75563 359 aaPredicted RBP12.93□□□□□ -0.34
HMGCS1-203ENST00000507004 AQP8O94778 261 aa12.93□□□□□ -0.34
HMGCS1-203ENST00000507004 C6orf47O95873 294 aa12.93□□□□□ -0.34
HMGCS1-203ENST00000507004 GUSBP08236 651 aa12.93□□□□□ -0.34
HMGCS1-203ENST00000507004 LINGO3P0C6S8 592 aa12.93□□□□□ -0.34
HMGCS1-203ENST00000507004 CD53P19397 219 aa12.93□□□□□ -0.34
HMGCS1-203ENST00000507004 NR1H2P55055 460 aa12.93□□□□□ -0.34
HMGCS1-203ENST00000507004 TPD52P55327 224 aaPredicted RBP12.93□□□□□ -0.34
HMGCS1-203ENST00000507004 CARD18P57730 90 aa12.93□□□□□ -0.34
HMGCS1-203ENST00000507004 FOXD4Q12950 439 aaPredicted RBP12.93□□□□□ -0.34
HMGCS1-203ENST00000507004 POU4F3Q15319 338 aa12.93□□□□□ -0.34
HMGCS1-203ENST00000507004 DPY19L1Q2PZI1 675 aa12.93□□□□□ -0.34
HMGCS1-203ENST00000507004 CTU2Q2VPK5 515 aaKnown RBP12.93□□□□□ -0.34
HMGCS1-203ENST00000507004 KLHL26Q53HC5 615 aa12.93□□□□□ -0.34
HMGCS1-203ENST00000507004 BEX5Q5H9J7 111 aa12.93□□□□□ -0.34
HMGCS1-203ENST00000507004 PPP4R4Q6NUP7 873 aa12.93□□□□□ -0.34
HMGCS1-203ENST00000507004 SSX8Q7RTT4 187 aa12.93□□□□□ -0.34
HMGCS1-203ENST00000507004 RIMKLAQ8IXN7 391 aa12.93□□□□□ -0.34
HMGCS1-203ENST00000507004 SLC43A2Q8N370 569 aa12.93□□□□□ -0.34
HMGCS1-203ENST00000507004 GATSQ8NAP1 163 aa12.93□□□□□ -0.34
HMGCS1-203ENST00000507004 SH3YL1Q96HL8 342 aaPredicted RBP12.93□□□□□ -0.34
HMGCS1-203ENST00000507004 MRGPRX4Q96LA9 322 aa12.93□□□□□ -0.34
HMGCS1-203ENST00000507004 C1orf50Q9BV19 199 aa12.93□□□□□ -0.34
HMGCS1-203ENST00000507004 HDHD5Q9BXW7 423 aa12.93□□□□□ -0.34
HMGCS1-203ENST00000507004 EXD2Q9NVH0 621 aa12.93□□□□□ -0.34
HMGCS1-203ENST00000507004 GPATCH2Q9NW75 528 aa12.93□□□□□ -0.34
HMGCS1-203ENST00000507004 KLHL28Q9NXS3 571 aa12.93□□□□□ -0.34
HMGCS1-203ENST00000507004 GPR52Q9Y2T5 361 aa12.93□□□□□ -0.34
HMGCS1-203ENST00000507004 DTNAQ9Y4J8 743 aa12.93□□□□□ -0.34
HMGCS1-203ENST00000507004 PCNX3Q9H6A9 2034 aa12.93□□□□□ -0.34
HMGCS1-203ENST00000507004 DEFB108AA8MXU0 73 aa12.92□□□□□ -0.34
HMGCS1-203ENST00000507004 RNASET2O00584 256 aaKnown RBP12.92□□□□□ -0.34
HMGCS1-203ENST00000507004 CXCL13O43927 109 aa12.92□□□□□ -0.34
HMGCS1-203ENST00000507004 GMFGO60234 142 aa12.92□□□□□ -0.34
HMGCS1-203ENST00000507004 NUDT14O95848 222 aa12.92□□□□□ -0.34
HMGCS1-203ENST00000507004 HOXC12P31275 282 aa12.92□□□□□ -0.34
HMGCS1-203ENST00000507004 SELENBP1Q13228 472 aa12.92□□□□□ -0.34
HMGCS1-203ENST00000507004 KRT71Q3SY84 523 aa12.92□□□□□ -0.34
HMGCS1-203ENST00000507004 TMEM201Q5SNT2 666 aa12.92□□□□□ -0.34
HMGCS1-203ENST00000507004 CCNJQ5T5M9 372 aa12.92□□□□□ -0.34
HMGCS1-203ENST00000507004 ANXA8L1Q5VT79 327 aa12.92□□□□□ -0.34
HMGCS1-203ENST00000507004 PRSS57Q6UWY2 283 aa12.92□□□□□ -0.34
HMGCS1-203ENST00000507004 ZAR1Q86SH2 424 aa12.92□□□□□ -0.34
HMGCS1-203ENST00000507004 BIVMQ86UB2 503 aa12.92□□□□□ -0.34
HMGCS1-203ENST00000507004 LILRA2Q8N149 483 aa12.92□□□□□ -0.34
HMGCS1-203ENST00000507004 OR8J2Q8NGG1 315 aa12.92□□□□□ -0.34
HMGCS1-203ENST00000507004 OSTF1Q92882 214 aa12.92□□□□□ -0.34
HMGCS1-203ENST00000507004 ARSGQ96EG1 525 aa12.92□□□□□ -0.34
HMGCS1-203ENST00000507004 C3orf30Q96M34 536 aa12.92□□□□□ -0.34
HMGCS1-203ENST00000507004 KLHL4Q9C0H6 718 aa12.92□□□□□ -0.34
HMGCS1-203ENST00000507004 NMUR2Q9GZQ4 415 aa12.92□□□□□ -0.34
HMGCS1-203ENST00000507004 CXorf36Q9H7Y0 433 aa12.92□□□□□ -0.34
HMGCS1-203ENST00000507004 ICAM5Q9UMF0 924 aa12.92□□□□□ -0.34
HMGCS1-203ENST00000507004 RAP2CQ9Y3L5 183 aa12.92□□□□□ -0.34
HMGCS1-203ENST00000507004 A0A0J9YW62 118 aa12.91□□□□□ -0.34
HMGCS1-203ENST00000507004 NPIPB9F8W1W9 429 aa12.91□□□□□ -0.34
HMGCS1-203ENST00000507004 TNFSF11O14788 317 aa12.91□□□□□ -0.34
HMGCS1-203ENST00000507004 ZNF264O43296 627 aa12.91□□□□□ -0.34
HMGCS1-203ENST00000507004 SMPD2O60906 423 aa12.91□□□□□ -0.34
HMGCS1-203ENST00000507004 STX11O75558 287 aa12.91□□□□□ -0.34
HMGCS1-203ENST00000507004 G6PDP11413 515 aa12.91□□□□□ -0.34
HMGCS1-203ENST00000507004 PSMB1P20618 241 aaKnown RBP12.91□□□□□ -0.34
HMGCS1-203ENST00000507004 CLNS1AP54105 237 aaKnown RBP12.91□□□□□ -0.34
HMGCS1-203ENST00000507004 ABCE1P61221 599 aaKnown RBP12.91□□□□□ -0.34
HMGCS1-203ENST00000507004 NKX6-1P78426 367 aaPredicted RBP12.91□□□□□ -0.34
HMGCS1-203ENST00000507004 TXNL4AP83876 142 aaKnown RBP12.91□□□□□ -0.34
HMGCS1-203ENST00000507004 ZNF117Q03924 483 aa12.91□□□□□ -0.34
HMGCS1-203ENST00000507004 CBFBQ13951 182 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms