RNA–Protein interactions for RNA: ENST00000506707.1

USP46-206, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-206ENST00000506707 PTOV1Q86YD1 416 aa5.19□□□□□ -1.58
USP46-206ENST00000506707 SLC15A3Q8IY34 581 aa5.19□□□□□ -1.58
USP46-206ENST00000506707 GHDCQ8N2G8 530 aa5.19□□□□□ -1.58
USP46-206ENST00000506707 ZNF619Q8N2I2 560 aa5.19□□□□□ -1.58
USP46-206ENST00000506707 FAM109AQ8N4B1 249 aa5.19□□□□□ -1.58
USP46-206ENST00000506707 METTL25Q8N6Q8 603 aa5.19□□□□□ -1.58
USP46-206ENST00000506707 GATSQ8NAP1 163 aa5.19□□□□□ -1.58
USP46-206ENST00000506707 PCYOX1LQ8NBM8 494 aa5.19□□□□□ -1.58
USP46-206ENST00000506707 CCDC197Q8NCU1 140 aa5.19□□□□□ -1.58
USP46-206ENST00000506707 FAM83FQ8NEG4 500 aaPredicted RBP5.19□□□□□ -1.58
USP46-206ENST00000506707 OR2M3Q8NG83 312 aa5.19□□□□□ -1.58
USP46-206ENST00000506707 OR8J3Q8NGG0 315 aa5.19□□□□□ -1.58
USP46-206ENST00000506707 OR10A6Q8NH74 314 aa5.19□□□□□ -1.58
USP46-206ENST00000506707 NEIL3Q8TAT5 605 aa5.19□□□□□ -1.58
USP46-206ENST00000506707 PHOSPHO1Q8TCT1 267 aa5.19□□□□□ -1.58
USP46-206ENST00000506707 BCAS4Q8TDM0 211 aa5.19□□□□□ -1.58
USP46-206ENST00000506707 PMM1Q92871 262 aa5.19□□□□□ -1.58
USP46-206ENST00000506707 RCN3Q96D15 328 aa5.19□□□□□ -1.58
USP46-206ENST00000506707 CMTM5Q96DZ9 223 aa5.19□□□□□ -1.58
USP46-206ENST00000506707 TMEM19Q96HH6 336 aa5.19□□□□□ -1.58
USP46-206ENST00000506707 ZNF583Q96ND8 569 aa5.19□□□□□ -1.58
USP46-206ENST00000506707 TREX2Q9BQ50 279 aaPredicted RBP5.19□□□□□ -1.58
USP46-206ENST00000506707 GPATCH1Q9BRR8 931 aaKnown RBP5.19□□□□□ -1.58
USP46-206ENST00000506707 DSN1Q9H410 356 aa5.19□□□□□ -1.58
USP46-206ENST00000506707 RAD21L1Q9H4I0 556 aa5.19□□□□□ -1.58
USP46-206ENST00000506707 TMEM38AQ9H6F2 299 aa5.19□□□□□ -1.58
USP46-206ENST00000506707 EFCAB1Q9HAE3 211 aa5.19□□□□□ -1.58
USP46-206ENST00000506707 BCL2L10Q9HD36 194 aa5.19□□□□□ -1.58
USP46-206ENST00000506707 TPSG1Q9NRR2 321 aa5.19□□□□□ -1.58
USP46-206ENST00000506707 ARL8BQ9NVJ2 186 aa5.19□□□□□ -1.58
USP46-206ENST00000506707 GID8Q9NWU2 228 aa5.19□□□□□ -1.58
USP46-206ENST00000506707 PPP4R1LQ9P1A2 415 aa5.19□□□□□ -1.58
USP46-206ENST00000506707 P2RX2Q9UBL9 471 aa5.19□□□□□ -1.58
USP46-206ENST00000506707 SUCOQ9UBS9 1254 aaKnown RBP5.19□□□□□ -1.58
USP46-206ENST00000506707 SEC14L3Q9UDX4 400 aa5.19□□□□□ -1.58
USP46-206ENST00000506707 ICAM5Q9UMF0 924 aa5.19□□□□□ -1.58
USP46-206ENST00000506707 CARD8Q9Y2G2 431 aa5.19□□□□□ -1.58
USP46-206ENST00000506707 MRPS18CQ9Y3D5 142 aaKnown RBP5.19□□□□□ -1.58
USP46-206ENST00000506707 CHST2Q9Y4C5 530 aa5.19□□□□□ -1.58
USP46-206ENST00000506707 LIPGQ9Y5X9 500 aa5.19□□□□□ -1.58
USP46-206ENST00000506707 PRRC2CQ9Y520 2896 aaKnown RBP5.19□□□□□ -1.58
USP46-206ENST00000506707 DSPPQ9NZW4 1301 aa5.19□□□□□ -1.58
USP46-206ENST00000506707 ZNF462Q96JM2 2506 aa5.19□□□□□ -1.58
USP46-206ENST00000506707 RELNP78509 3460 aa5.18□□□□□ -1.58
USP46-206ENST00000506707 COL6A6A6NMZ7 2263 aa5.18□□□□□ -1.58
USP46-206ENST00000506707 TRGV5A0A0B4J1U4 118 aa5.18□□□□□ -1.58
USP46-206ENST00000506707 H3BNH8 94 aa5.18□□□□□ -1.58
USP46-206ENST00000506707 GTPBP1O00178 669 aaKnown RBP5.18□□□□□ -1.58
USP46-206ENST00000506707 AQP7O14520 342 aa5.18□□□□□ -1.58
USP46-206ENST00000506707 NDUFAB1O14561 156 aa5.18□□□□□ -1.58
USP46-206ENST00000506707 ZNF264O43296 627 aa5.18□□□□□ -1.58
USP46-206ENST00000506707 CDC40O60508 579 aaKnown RBP eCLIP5.18□□□□□ -1.58
USP46-206ENST00000506707 EIF4E2O60573 245 aaKnown RBP5.18□□□□□ -1.58
USP46-206ENST00000506707 HCN1O60741 890 aa5.18□□□□□ -1.58
USP46-206ENST00000506707 ADAM11O75078 769 aa5.18□□□□□ -1.58
USP46-206ENST00000506707 TRAPPC6AO75865 159 aa5.18□□□□□ -1.58
USP46-206ENST00000506707 BCHEP06276 602 aa5.18□□□□□ -1.58
USP46-206ENST00000506707 STSP08842 583 aa5.18□□□□□ -1.58
USP46-206ENST00000506707 T-ENOLP0DO92 83 aa5.18□□□□□ -1.58
USP46-206ENST00000506707 ETS2P15036 469 aa5.18□□□□□ -1.58
USP46-206ENST00000506707 DPP4P27487 766 aa5.18□□□□□ -1.58
USP46-206ENST00000506707 MSX1P28360 303 aa5.18□□□□□ -1.58
USP46-206ENST00000506707 SRD5A2P31213 254 aa5.18□□□□□ -1.58
USP46-206ENST00000506707 PGM1P36871 562 aa5.18□□□□□ -1.58
USP46-206ENST00000506707 UQCRFS1P47985 274 aa5.18□□□□□ -1.58
USP46-206ENST00000506707 CRISP3P54108 245 aa5.18□□□□□ -1.58
USP46-206ENST00000506707 GFRA1P56159 465 aa5.18□□□□□ -1.58
USP46-206ENST00000506707 DSCR4P56555 118 aaPredicted RBP5.18□□□□□ -1.58
USP46-206ENST00000506707 PCBP3P57721 371 aaKnown RBP5.18□□□□□ -1.58
USP46-206ENST00000506707 B3GALT5-AS1P59052 145 aa5.18□□□□□ -1.58
USP46-206ENST00000506707 KCNJ10P78508 379 aa5.18□□□□□ -1.58
USP46-206ENST00000506707 CDK6Q00534 326 aa5.18□□□□□ -1.58
USP46-206ENST00000506707 ZNF117Q03924 483 aa5.18□□□□□ -1.58
USP46-206ENST00000506707 RBBP4Q09028 425 aa5.18□□□□□ -1.58
USP46-206ENST00000506707 GNA13Q14344 377 aa5.18□□□□□ -1.58
USP46-206ENST00000506707 FGFBP1Q14512 234 aa5.18□□□□□ -1.58
USP46-206ENST00000506707 KRT72Q14CN4 511 aa5.18□□□□□ -1.58
USP46-206ENST00000506707 TOMM34Q15785 309 aaPredicted RBP5.18□□□□□ -1.58
USP46-206ENST00000506707 TMEM44Q2T9K0 475 aa5.18□□□□□ -1.58
USP46-206ENST00000506707 NDUFAF6Q330K2 333 aa5.18□□□□□ -1.58
USP46-206ENST00000506707 GXYLT1Q4G148 440 aa5.18□□□□□ -1.58
USP46-206ENST00000506707 EMC4Q5J8M3 183 aa5.18□□□□□ -1.58
USP46-206ENST00000506707 RPS26P11Q5JNZ5 115 aaPredicted RBP5.18□□□□□ -1.58
USP46-206ENST00000506707 WIPI1Q5MNZ9 446 aaPredicted RBP5.18□□□□□ -1.58
USP46-206ENST00000506707 GCNT6Q5T4J0 391 aa5.18□□□□□ -1.58
USP46-206ENST00000506707 PRAMEF8Q5VWM4 474 aa5.18□□□□□ -1.58
USP46-206ENST00000506707 PRAMEF7Q5VXH5 474 aa5.18□□□□□ -1.58
USP46-206ENST00000506707 REEP3Q6NUK4 255 aa5.18□□□□□ -1.58
USP46-206ENST00000506707 ARHGAP11AQ6P4F7 1023 aa5.18□□□□□ -1.58
USP46-206ENST00000506707 ARSKQ6UWY0 536 aa5.18□□□□□ -1.58
USP46-206ENST00000506707 HACD2Q6Y1H2 254 aa5.18□□□□□ -1.58
USP46-206ENST00000506707 Q6ZPB1 254 aaPredicted RBP5.18□□□□□ -1.58
USP46-206ENST00000506707 EIF3MQ7L2H7 374 aaKnown RBP5.18□□□□□ -1.58
USP46-206ENST00000506707 HMGN2P46Q86SG4 172 aa5.18□□□□□ -1.58
USP46-206ENST00000506707 SERPINA11Q86U17 422 aa5.18□□□□□ -1.58
USP46-206ENST00000506707 YRDCQ86U90 279 aaKnown RBP5.18□□□□□ -1.58
USP46-206ENST00000506707 VRK2Q86Y07 508 aa5.18□□□□□ -1.58
USP46-206ENST00000506707 DOLPP1Q86YN1 238 aa5.18□□□□□ -1.58
USP46-206ENST00000506707 SPPL2CQ8IUH8 684 aa5.18□□□□□ -1.58
USP46-206ENST00000506707 MISPQ8IVT2 679 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms