RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 SEC24CP53992 1094 aa16.5■□□□□ 0.23
PDLIM7-216ENST00000506537 CLDN18P56856 261 aa16.5■□□□□ 0.23
PDLIM7-216ENST00000506537 DSTNP60981 165 aa16.5■□□□□ 0.23
PDLIM7-216ENST00000506537 HPCAP84074 193 aa16.5■□□□□ 0.23
PDLIM7-216ENST00000506537 PMPCAQ10713 525 aa16.5■□□□□ 0.23
PDLIM7-216ENST00000506537 RGNQ15493 299 aa16.5■□□□□ 0.23
PDLIM7-216ENST00000506537 PLPPR5Q32ZL2 321 aa16.5■□□□□ 0.23
PDLIM7-216ENST00000506537 AAGABQ6PD74 315 aa16.5■□□□□ 0.23
PDLIM7-216ENST00000506537 B3GNT6Q6ZMB0 384 aa16.5■□□□□ 0.23
PDLIM7-216ENST00000506537 LRRC74BQ6ZQY2 392 aa16.5■□□□□ 0.23
PDLIM7-216ENST00000506537 SEM1Q6ZVN7 128 aa16.5■□□□□ 0.23
PDLIM7-216ENST00000506537 PM20D2Q8IYS1 436 aa16.5■□□□□ 0.23
PDLIM7-216ENST00000506537 ZNF808Q8N4W9 903 aaPredicted RBP16.5■□□□□ 0.23
PDLIM7-216ENST00000506537 DPP10Q8N608 796 aa16.5■□□□□ 0.23
PDLIM7-216ENST00000506537 ZNF524Q96C55 264 aa16.5■□□□□ 0.23
PDLIM7-216ENST00000506537 ARSGQ96EG1 525 aa16.5■□□□□ 0.23
PDLIM7-216ENST00000506537 HHATLQ9HCP6 504 aa16.5■□□□□ 0.23
PDLIM7-216ENST00000506537 MED17Q9NVC6 651 aa16.5■□□□□ 0.23
PDLIM7-216ENST00000506537 LEF1Q9UJU2 399 aaPredicted RBP16.5■□□□□ 0.23
PDLIM7-216ENST00000506537 ARHGAP21Q5T5U3 1957 aa16.49■□□□□ 0.23
PDLIM7-216ENST00000506537 H3BNH8 94 aa16.49■□□□□ 0.23
PDLIM7-216ENST00000506537 TFPTP0C1Z6 253 aa16.49■□□□□ 0.23
PDLIM7-216ENST00000506537 NR2F1P10589 423 aa16.49■□□□□ 0.23
PDLIM7-216ENST00000506537 UBL4AP11441 157 aa16.49■□□□□ 0.23
PDLIM7-216ENST00000506537 CPN1P15169 458 aa16.49■□□□□ 0.23
PDLIM7-216ENST00000506537 ZNF708P17019 499 aa16.49■□□□□ 0.23
PDLIM7-216ENST00000506537 ADH7P40394 386 aa16.49■□□□□ 0.23
PDLIM7-216ENST00000506537 SKP2Q13309 424 aa16.49■□□□□ 0.23
PDLIM7-216ENST00000506537 FGFBP1Q14512 234 aa16.49■□□□□ 0.23
PDLIM7-216ENST00000506537 GLYR1Q49A26 553 aaPredicted RBP16.49■□□□□ 0.23
PDLIM7-216ENST00000506537 TMEM211Q6ICI0 200 aa16.49■□□□□ 0.23
PDLIM7-216ENST00000506537 FAM71CQ8NEG0 241 aa16.49■□□□□ 0.23
PDLIM7-216ENST00000506537 POC1BQ8TC44 478 aa16.49■□□□□ 0.23
PDLIM7-216ENST00000506537 TSPEARQ8WU66 669 aa16.49■□□□□ 0.23
PDLIM7-216ENST00000506537 P2RX2Q9UBL9 471 aa16.49■□□□□ 0.23
PDLIM7-216ENST00000506537 NDUFAF1Q9Y375 327 aa16.49■□□□□ 0.23
PDLIM7-216ENST00000506537 ZNF337Q9Y3M9 751 aa16.49■□□□□ 0.23
PDLIM7-216ENST00000506537 GMEB1Q9Y692 573 aa16.49■□□□□ 0.23
PDLIM7-216ENST00000506537 DSPPQ9NZW4 1301 aa16.48■□□□□ 0.23
PDLIM7-216ENST00000506537 A0A087WZY1 265 aa16.48■□□□□ 0.23
PDLIM7-216ENST00000506537 C7orf72A4D263 438 aa16.48■□□□□ 0.23
PDLIM7-216ENST00000506537 CLDN24A6NM45 220 aa16.48■□□□□ 0.23
PDLIM7-216ENST00000506537 AHRRA9YTQ3 701 aa16.48■□□□□ 0.23
PDLIM7-216ENST00000506537 GTPBP1O00178 669 aaKnown RBP16.48■□□□□ 0.23
PDLIM7-216ENST00000506537 FBP2O00757 339 aa16.48■□□□□ 0.23
PDLIM7-216ENST00000506537 ANGPT2O15123 496 aa16.48■□□□□ 0.23
PDLIM7-216ENST00000506537 ZNF264O43296 627 aa16.48■□□□□ 0.23
PDLIM7-216ENST00000506537 BCHEP06276 602 aa16.48■□□□□ 0.23
PDLIM7-216ENST00000506537 SNRPB2P08579 225 aaKnown RBP16.48■□□□□ 0.23
PDLIM7-216ENST00000506537 HOXD4P09016 255 aaPredicted RBP16.48■□□□□ 0.23
PDLIM7-216ENST00000506537 LINGO3P0C6S8 592 aa16.48■□□□□ 0.23
PDLIM7-216ENST00000506537 BMP2P12643 396 aa16.48■□□□□ 0.23
PDLIM7-216ENST00000506537 ZNF17P17021 662 aa16.48■□□□□ 0.23
PDLIM7-216ENST00000506537 RPS4Y1P22090 263 aaKnown RBP16.48■□□□□ 0.23
PDLIM7-216ENST00000506537 PSMA4P25789 261 aaKnown RBP16.48■□□□□ 0.23
PDLIM7-216ENST00000506537 PTGER4P35408 488 aa16.48■□□□□ 0.23
PDLIM7-216ENST00000506537 P2RX1P51575 399 aa16.48■□□□□ 0.23
PDLIM7-216ENST00000506537 ZNF41P51814 821 aaPredicted RBP16.48■□□□□ 0.23
PDLIM7-216ENST00000506537 SMSP52788 366 aa16.48■□□□□ 0.23
PDLIM7-216ENST00000506537 CLDN15P56746 228 aa16.48■□□□□ 0.23
PDLIM7-216ENST00000506537 SRYQ05066 204 aa16.48■□□□□ 0.23
PDLIM7-216ENST00000506537 KLF10Q13118 480 aa16.48■□□□□ 0.23
PDLIM7-216ENST00000506537 FADDQ13158 208 aa16.48■□□□□ 0.23
PDLIM7-216ENST00000506537 TOMM34Q15785 309 aaPredicted RBP16.48■□□□□ 0.23
PDLIM7-216ENST00000506537 ENPP6Q6UWR7 440 aa16.48■□□□□ 0.23
PDLIM7-216ENST00000506537 DHDDSQ86SQ9 333 aa16.48■□□□□ 0.23
PDLIM7-216ENST00000506537 GTPBP8Q8N3Z3 284 aaPredicted RBP16.48■□□□□ 0.23
PDLIM7-216ENST00000506537 SLC38A5Q8WUX1 472 aa16.48■□□□□ 0.23
PDLIM7-216ENST00000506537 OIT3Q8WWZ8 545 aa16.48■□□□□ 0.23
PDLIM7-216ENST00000506537 TUBA1CQ9BQE3 449 aa16.48■□□□□ 0.23
PDLIM7-216ENST00000506537 PIGQQ9BRB3 760 aa16.48■□□□□ 0.23
PDLIM7-216ENST00000506537 CPPED1Q9BRF8 314 aaPredicted RBP16.48■□□□□ 0.23
PDLIM7-216ENST00000506537 PLEKHB1Q9UF11 243 aaPredicted RBP16.48■□□□□ 0.23
PDLIM7-216ENST00000506537 RNF6Q9Y252 685 aa16.48■□□□□ 0.23
PDLIM7-216ENST00000506537 HEATR5AQ86XA9 2040 aa16.48■□□□□ 0.23
PDLIM7-216ENST00000506537 AGAP5A6NIR3 686 aa16.47■□□□□ 0.23
PDLIM7-216ENST00000506537 H0Y3Z8 333 aa16.47■□□□□ 0.23
PDLIM7-216ENST00000506537 H0YC42 278 aa16.47■□□□□ 0.23
PDLIM7-216ENST00000506537 EIF4E2O60573 245 aaKnown RBP16.47■□□□□ 0.23
PDLIM7-216ENST00000506537 TOXO94900 526 aa16.47■□□□□ 0.23
PDLIM7-216ENST00000506537 CSTAP01040 98 aa16.47■□□□□ 0.23
PDLIM7-216ENST00000506537 POU3F2P20265 443 aaPredicted RBP16.47■□□□□ 0.23
PDLIM7-216ENST00000506537 AGAP20933 346 aa16.47■□□□□ 0.23
PDLIM7-216ENST00000506537 LSP1P33241 339 aa16.47■□□□□ 0.23
PDLIM7-216ENST00000506537 PGM1P36871 562 aa16.47■□□□□ 0.23
PDLIM7-216ENST00000506537 TPD52P55327 224 aaPredicted RBP16.47■□□□□ 0.23
PDLIM7-216ENST00000506537 SUMO3P55854 103 aaPredicted RBP16.47■□□□□ 0.23
PDLIM7-216ENST00000506537 FOXF1Q12946 379 aa16.47■□□□□ 0.23
PDLIM7-216ENST00000506537 RPS26P11Q5JNZ5 115 aaPredicted RBP16.47■□□□□ 0.23
PDLIM7-216ENST00000506537 HIST2H2BCQ6DN03 193 aa16.47■□□□□ 0.23
PDLIM7-216ENST00000506537 XKRXQ6PP77 449 aa16.47■□□□□ 0.23
PDLIM7-216ENST00000506537 PLXDC2Q6UX71 529 aa16.47■□□□□ 0.23
PDLIM7-216ENST00000506537 MAMDC2Q7Z304 686 aaPredicted RBP16.47■□□□□ 0.23
PDLIM7-216ENST00000506537 ADGRE4PQ86SQ3 457 aa16.47■□□□□ 0.23
PDLIM7-216ENST00000506537 CCDC71Q8IV32 467 aaPredicted RBP16.47■□□□□ 0.23
PDLIM7-216ENST00000506537 TMCO5AQ8N6Q1 288 aa16.47■□□□□ 0.23
PDLIM7-216ENST00000506537 OR5W2Q8NH69 310 aa16.47■□□□□ 0.23
PDLIM7-216ENST00000506537 GPR119Q8TDV5 335 aa16.47■□□□□ 0.23
PDLIM7-216ENST00000506537 RND1Q92730 232 aa16.47■□□□□ 0.23
PDLIM7-216ENST00000506537 MAL2Q969L2 176 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms