RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 BANPQ8N9N5 519 aa18.77■□□□□ 0.6
SQSTM1-210ENST00000506042 PHOSPHO1Q8TCT1 267 aa18.77■□□□□ 0.6
SQSTM1-210ENST00000506042 RNF128Q8TEB7 428 aa18.77■□□□□ 0.6
SQSTM1-210ENST00000506042 HOXB13Q92826 284 aaPredicted RBP18.77■□□□□ 0.6
SQSTM1-210ENST00000506042 ADGRG7Q96K78 797 aa18.77■□□□□ 0.6
SQSTM1-210ENST00000506042 STACQ99469 402 aa18.77■□□□□ 0.6
SQSTM1-210ENST00000506042 TRMOQ9BU70 441 aa18.77■□□□□ 0.6
SQSTM1-210ENST00000506042 DUSP22Q9NRW4 184 aa18.77■□□□□ 0.6
SQSTM1-210ENST00000506042 ATAD3AQ9NVI7 634 aa18.77■□□□□ 0.6
SQSTM1-210ENST00000506042 NTMQ9P121 344 aa18.77■□□□□ 0.6
SQSTM1-210ENST00000506042 TBK1Q9UHD2 729 aa18.77■□□□□ 0.6
SQSTM1-210ENST00000506042 FAF1Q9UNN5 650 aaPredicted RBP18.77■□□□□ 0.6
SQSTM1-210ENST00000506042 ITGADQ13349 1161 aa18.76■□□□□ 0.59
SQSTM1-210ENST00000506042 TP53BP2Q13625 1128 aa18.76■□□□□ 0.59
SQSTM1-210ENST00000506042 SFRP5Q5T4F7 317 aa18.76■□□□□ 0.59
SQSTM1-210ENST00000506042 MFSD12Q6NUT3 480 aa18.76■□□□□ 0.59
SQSTM1-210ENST00000506042 BHLHB9Q6PI77 547 aa18.76■□□□□ 0.59
SQSTM1-210ENST00000506042 APOOLQ6UXV4 268 aa18.76■□□□□ 0.59
SQSTM1-210ENST00000506042 FCRLAQ7L513 359 aa18.76■□□□□ 0.59
SQSTM1-210ENST00000506042 SMAP2Q8WU79 429 aaPredicted RBP18.76■□□□□ 0.59
SQSTM1-210ENST00000506042 IGFBPL1Q8WX77 278 aa18.76■□□□□ 0.59
SQSTM1-210ENST00000506042 RADILQ96JH8 1075 aa18.76■□□□□ 0.59
SQSTM1-210ENST00000506042 PRPF18Q99633 342 aaKnown RBP18.76■□□□□ 0.59
SQSTM1-210ENST00000506042 ZCCHC3Q9NUD5 404 aaKnown RBP18.76■□□□□ 0.59
SQSTM1-210ENST00000506042 GIN1Q9NXP7 522 aa18.76■□□□□ 0.59
SQSTM1-210ENST00000506042 A0A0J9YW62 118 aa18.75■□□□□ 0.59
SQSTM1-210ENST00000506042 NPIPB8E9PQR5 432 aa18.75■□□□□ 0.59
SQSTM1-210ENST00000506042 IGKV1D-16P01601 117 aa18.75■□□□□ 0.59
SQSTM1-210ENST00000506042 YES1P07947 543 aa18.75■□□□□ 0.59
SQSTM1-210ENST00000506042 P2RX1P51575 399 aa18.75■□□□□ 0.59
SQSTM1-210ENST00000506042 FOXA1P55317 472 aa18.75■□□□□ 0.59
SQSTM1-210ENST00000506042 NCMAPQ5T1S8 102 aa18.75■□□□□ 0.59
SQSTM1-210ENST00000506042 SLC16A11Q8NCK7 471 aa18.75■□□□□ 0.59
SQSTM1-210ENST00000506042 TOR1AIP2Q8NFQ8 470 aa18.75■□□□□ 0.59
SQSTM1-210ENST00000506042 FAM110BQ8TC76 370 aa18.75■□□□□ 0.59
SQSTM1-210ENST00000506042 MDFIQ99750 246 aa18.75■□□□□ 0.59
SQSTM1-210ENST00000506042 REG4Q9BYZ8 158 aa18.75■□□□□ 0.59
SQSTM1-210ENST00000506042 ACTL7BQ9Y614 415 aa18.75■□□□□ 0.59
SQSTM1-210ENST00000506042 RNF223E7ERA6 249 aa18.74■□□□□ 0.59
SQSTM1-210ENST00000506042 UBFD1O14562 309 aaKnown RBP18.74■□□□□ 0.59
SQSTM1-210ENST00000506042 AKAP10O43572 662 aa18.74■□□□□ 0.59
SQSTM1-210ENST00000506042 CPA3P15088 417 aa18.74■□□□□ 0.59
SQSTM1-210ENST00000506042 MAP3K8P41279 467 aa18.74■□□□□ 0.59
SQSTM1-210ENST00000506042 SELENBP1Q13228 472 aa18.74■□□□□ 0.59
SQSTM1-210ENST00000506042 MLC1Q15049 377 aa18.74■□□□□ 0.59
SQSTM1-210ENST00000506042 DUSP5Q16690 384 aa18.74■□□□□ 0.59
SQSTM1-210ENST00000506042 LSM12Q3MHD2 195 aaKnown RBP18.74■□□□□ 0.59
SQSTM1-210ENST00000506042 SPDYE7PQ495Y7 208 aa18.74■□□□□ 0.59
SQSTM1-210ENST00000506042 LIPMQ5VYY2 423 aa18.74■□□□□ 0.59
SQSTM1-210ENST00000506042 RNF165Q6ZSG1 346 aa18.74■□□□□ 0.59
SQSTM1-210ENST00000506042 P2RY8Q86VZ1 359 aa18.74■□□□□ 0.59
SQSTM1-210ENST00000506042 OR56A1Q8NGH5 318 aa18.74■□□□□ 0.59
SQSTM1-210ENST00000506042 ADAMTS15Q8TE58 950 aa18.74■□□□□ 0.59
SQSTM1-210ENST00000506042 ZFP90Q8TF47 636 aa18.74■□□□□ 0.59
SQSTM1-210ENST00000506042 CIDECQ96AQ7 238 aaPredicted RBP18.74■□□□□ 0.59
SQSTM1-210ENST00000506042 MOAP1Q96BY2 351 aa18.74■□□□□ 0.59
SQSTM1-210ENST00000506042 EGLN2Q96KS0 407 aa18.74■□□□□ 0.59
SQSTM1-210ENST00000506042 MRGPRX4Q96LA9 322 aa18.74■□□□□ 0.59
SQSTM1-210ENST00000506042 ADAD1Q96M93 576 aaKnown RBP18.74■□□□□ 0.59
SQSTM1-210ENST00000506042 TSSK3Q96PN8 268 aa18.74■□□□□ 0.59
SQSTM1-210ENST00000506042 PIGUQ9H490 435 aa18.74■□□□□ 0.59
SQSTM1-210ENST00000506042 EML4Q9HC35 981 aaKnown RBP18.74■□□□□ 0.59
SQSTM1-210ENST00000506042 SERINC1Q9NRX5 453 aa18.74■□□□□ 0.59
SQSTM1-210ENST00000506042 FN1P02751 2386 aaKnown RBP18.73■□□□□ 0.59
SQSTM1-210ENST00000506042 G3V2L1 256 aa18.73■□□□□ 0.59
SQSTM1-210ENST00000506042 COPEO14579 308 aa18.73■□□□□ 0.59
SQSTM1-210ENST00000506042 AZIN1O14977 448 aa18.73■□□□□ 0.59
SQSTM1-210ENST00000506042 PLAUP00749 431 aa18.73■□□□□ 0.59
SQSTM1-210ENST00000506042 OPN1LWP04000 364 aa18.73■□□□□ 0.59
SQSTM1-210ENST00000506042 ACP2P11117 423 aa18.73■□□□□ 0.59
SQSTM1-210ENST00000506042 PSMA4P25789 261 aaKnown RBP18.73■□□□□ 0.59
SQSTM1-210ENST00000506042 ECHS1P30084 290 aa18.73■□□□□ 0.59
SQSTM1-210ENST00000506042 RPL38P63173 70 aaKnown RBP18.73■□□□□ 0.59
SQSTM1-210ENST00000506042 ZNF672Q499Z4 452 aaPredicted RBP18.73■□□□□ 0.59
SQSTM1-210ENST00000506042 TFAP2EQ6VUC0 442 aa18.73■□□□□ 0.59
SQSTM1-210ENST00000506042 DNAJC14Q6Y2X3 702 aaPredicted RBP18.73■□□□□ 0.59
SQSTM1-210ENST00000506042 C22orf34Q6ZV56 151 aa18.73■□□□□ 0.59
SQSTM1-210ENST00000506042 BHLHA15Q7RTS1 189 aaPredicted RBP18.73■□□□□ 0.59
SQSTM1-210ENST00000506042 GABRG1Q8N1C3 465 aa18.73■□□□□ 0.59
SQSTM1-210ENST00000506042 DEPDC4Q8N2C3 294 aa18.73■□□□□ 0.59
SQSTM1-210ENST00000506042 C17orf53Q8N3J3 647 aaPredicted RBP18.73■□□□□ 0.59
SQSTM1-210ENST00000506042 TMCO5AQ8N6Q1 288 aa18.73■□□□□ 0.59
SQSTM1-210ENST00000506042 NOA1Q8NC60 698 aaKnown RBP18.73■□□□□ 0.59
SQSTM1-210ENST00000506042 FBXO30Q8TB52 745 aa18.73■□□□□ 0.59
SQSTM1-210ENST00000506042 ABHD3Q8WU67 409 aa18.73■□□□□ 0.59
SQSTM1-210ENST00000506042 ROBO4Q8WZ75 1007 aa18.73■□□□□ 0.59
SQSTM1-210ENST00000506042 RHNO1Q9BSD3 238 aa18.73■□□□□ 0.59
SQSTM1-210ENST00000506042 OXSMQ9NWU1 459 aa18.73■□□□□ 0.59
SQSTM1-210ENST00000506042 EMC3Q9P0I2 261 aa18.73■□□□□ 0.59
SQSTM1-210ENST00000506042 LIPT1Q9Y234 373 aa18.73■□□□□ 0.59
SQSTM1-210ENST00000506042 ZNF195O14628 629 aa18.72■□□□□ 0.59
SQSTM1-210ENST00000506042 PROCP04070 461 aa18.72■□□□□ 0.59
SQSTM1-210ENST00000506042 LINGO3P0C6S8 592 aa18.72■□□□□ 0.59
SQSTM1-210ENST00000506042 BMP4P12644 408 aa18.72■□□□□ 0.59
SQSTM1-210ENST00000506042 GCAP28676 217 aa18.72■□□□□ 0.59
SQSTM1-210ENST00000506042 FRKP42685 505 aaPredicted RBP18.72■□□□□ 0.59
SQSTM1-210ENST00000506042 FOXF1Q12946 379 aa18.72■□□□□ 0.59
SQSTM1-210ENST00000506042 PRSS53Q2L4Q9 553 aa18.72■□□□□ 0.59
SQSTM1-210ENST00000506042 TMEM176BQ3YBM2 270 aaPredicted RBP18.72■□□□□ 0.59
SQSTM1-210ENST00000506042 AGAP6Q5VW22 663 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms