RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 SLC30A2Q9BRI3 323 aa2.8□□□□□ -1.96
TOPBP1-204ENST00000505804 CNPY3Q9BT09 278 aa2.8□□□□□ -1.96
TOPBP1-204ENST00000505804 PPDPFQ9H3Y8 114 aa2.8□□□□□ -1.96
TOPBP1-204ENST00000505804 ADAM22Q9P0K1 906 aa2.8□□□□□ -1.96
TOPBP1-204ENST00000505804 NYAP2Q9P242 653 aa2.8□□□□□ -1.96
TOPBP1-204ENST00000505804 ONECUT1Q9UBC0 465 aa2.8□□□□□ -1.96
TOPBP1-204ENST00000505804 MFHAS1Q9Y4C4 1052 aa2.8□□□□□ -1.96
TOPBP1-204ENST00000505804 SPACA6W5XKT8 324 aa2.8□□□□□ -1.96
TOPBP1-204ENST00000505804 ATRXP46100 2492 aa2.79□□□□□ -1.96
TOPBP1-204ENST00000505804 LOC100131303A0A0U1RQF7 123 aa2.79□□□□□ -1.96
TOPBP1-204ENST00000505804 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.79□□□□□ -1.96
TOPBP1-204ENST00000505804 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.79□□□□□ -1.96
TOPBP1-204ENST00000505804 TUBAL3A6NHL2 446 aa2.79□□□□□ -1.96
TOPBP1-204ENST00000505804 B4DXG7 233 aa2.79□□□□□ -1.96
TOPBP1-204ENST00000505804 CLDN3O15551 220 aa2.79□□□□□ -1.96
TOPBP1-204ENST00000505804 B3GALNT1O75752 331 aa2.79□□□□□ -1.96
TOPBP1-204ENST00000505804 ACTL6AO96019 429 aa2.79□□□□□ -1.96
TOPBP1-204ENST00000505804 F10P00742 488 aa2.79□□□□□ -1.96
TOPBP1-204ENST00000505804 OPN1LWP04000 364 aa2.79□□□□□ -1.96
TOPBP1-204ENST00000505804 CSF2P04141 144 aa2.79□□□□□ -1.96
TOPBP1-204ENST00000505804 NCF1P14598 390 aaPredicted RBP2.79□□□□□ -1.96
TOPBP1-204ENST00000505804 IGLL1P15814 213 aa2.79□□□□□ -1.96
TOPBP1-204ENST00000505804 ELK1P19419 428 aa2.79□□□□□ -1.96
TOPBP1-204ENST00000505804 GCKP35557 465 aa2.79□□□□□ -1.96
TOPBP1-204ENST00000505804 EFNA3P52797 238 aa2.79□□□□□ -1.96
TOPBP1-204ENST00000505804 ELAVL3Q14576 367 aaKnown RBP2.79□□□□□ -1.96
TOPBP1-204ENST00000505804 AANATQ16613 207 aa2.79□□□□□ -1.96
TOPBP1-204ENST00000505804 NDUFA9Q16795 377 aa2.79□□□□□ -1.96
TOPBP1-204ENST00000505804 DPY19L4Q7Z388 723 aa2.79□□□□□ -1.96
TOPBP1-204ENST00000505804 C17orf82Q86X59 251 aaPredicted RBP2.79□□□□□ -1.96
TOPBP1-204ENST00000505804 FGGYQ96C11 551 aa2.79□□□□□ -1.96
TOPBP1-204ENST00000505804 ZNF414Q96IQ9 312 aa2.79□□□□□ -1.96
TOPBP1-204ENST00000505804 OR5B2Q96R09 309 aa2.79□□□□□ -1.96
TOPBP1-204ENST00000505804 CYP2S1Q96SQ9 504 aa2.79□□□□□ -1.96
TOPBP1-204ENST00000505804 CITED1Q99966 193 aa2.79□□□□□ -1.96
TOPBP1-204ENST00000505804 WDR76Q9H967 626 aa2.79□□□□□ -1.96
TOPBP1-204ENST00000505804 ANAPC11Q9NYG5 84 aa2.79□□□□□ -1.96
TOPBP1-204ENST00000505804 ZNF221Q9UK13 617 aa2.79□□□□□ -1.96
TOPBP1-204ENST00000505804 MAB21L2Q9Y586 359 aa2.79□□□□□ -1.96
TOPBP1-204ENST00000505804 ZNF705EA8MWA4 302 aaPredicted RBP2.78□□□□□ -1.96
TOPBP1-204ENST00000505804 H0Y9J4 135 aa2.78□□□□□ -1.96
TOPBP1-204ENST00000505804 CALCBP10092 127 aa2.78□□□□□ -1.96
TOPBP1-204ENST00000505804 ADSSP30520 456 aa2.78□□□□□ -1.96
TOPBP1-204ENST00000505804 EPHX2P34913 555 aa2.78□□□□□ -1.96
TOPBP1-204ENST00000505804 RBMXP38159 391 aaKnown RBP2.78□□□□□ -1.96
TOPBP1-204ENST00000505804 KIR2DS2P43631 304 aa2.78□□□□□ -1.96
TOPBP1-204ENST00000505804 KRTAP12-2P59991 146 aa2.78□□□□□ -1.96
TOPBP1-204ENST00000505804 LAGE3Q14657 143 aa2.78□□□□□ -1.96
TOPBP1-204ENST00000505804 TIGITQ495A1 244 aa2.78□□□□□ -1.96
TOPBP1-204ENST00000505804 ACSM5Q6NUN0 579 aa2.78□□□□□ -1.96
TOPBP1-204ENST00000505804 DNM1P46Q6ZS02 220 aa2.78□□□□□ -1.96
TOPBP1-204ENST00000505804 APTXQ7Z2E3 356 aaKnown RBP2.78□□□□□ -1.96
TOPBP1-204ENST00000505804 GRAMD2AQ8IUY3 354 aa2.78□□□□□ -1.96
TOPBP1-204ENST00000505804 ERI1Q8IV48 349 aaKnown RBP2.78□□□□□ -1.96
TOPBP1-204ENST00000505804 GPATCH11Q8N954 259 aa2.78□□□□□ -1.96
TOPBP1-204ENST00000505804 AENQ8WTP8 325 aaKnown RBP2.78□□□□□ -1.96
TOPBP1-204ENST00000505804 MYLPFQ96A32 169 aa2.78□□□□□ -1.96
TOPBP1-204ENST00000505804 MS4A14Q96JA4 679 aa2.78□□□□□ -1.96
TOPBP1-204ENST00000505804 C4orf36Q96KX1 117 aa2.78□□□□□ -1.96
TOPBP1-204ENST00000505804 PLEKHF1Q96S99 279 aa2.78□□□□□ -1.96
TOPBP1-204ENST00000505804 CHIAQ9BZP6 476 aa2.78□□□□□ -1.96
TOPBP1-204ENST00000505804 COQ10BQ9H8M1 238 aa2.78□□□□□ -1.96
TOPBP1-204ENST00000505804 POLE3Q9NRF9 147 aa2.78□□□□□ -1.96
TOPBP1-204ENST00000505804 WRAP73Q9P2S5 460 aaPredicted RBP2.78□□□□□ -1.96
TOPBP1-204ENST00000505804 AURKCQ9UQB9 309 aa2.78□□□□□ -1.96
TOPBP1-204ENST00000505804 WDR45Q9Y484 360 aa2.78□□□□□ -1.96
TOPBP1-204ENST00000505804 U3KQV3 271 aa2.78□□□□□ -1.96
TOPBP1-204ENST00000505804 ATP10DQ9P241 1426 aa2.77□□□□□ -1.97
TOPBP1-204ENST00000505804 PRRC2AP48634 2157 aaKnown RBP2.77□□□□□ -1.97
TOPBP1-204ENST00000505804 PPIAL4CA0A0B4J2A2 164 aa2.77□□□□□ -1.97
TOPBP1-204ENST00000505804 SMIM28A0A1B0GU29 152 aa2.77□□□□□ -1.97
TOPBP1-204ENST00000505804 CLDN5O00501 218 aa2.77□□□□□ -1.97
TOPBP1-204ENST00000505804 EMC8O43402 210 aa2.77□□□□□ -1.97
TOPBP1-204ENST00000505804 TIMP1P01033 207 aa2.77□□□□□ -1.97
TOPBP1-204ENST00000505804 IFNB1P01574 187 aa2.77□□□□□ -1.97
TOPBP1-204ENST00000505804 PPIAL4GP0DN37 164 aa2.77□□□□□ -1.97
TOPBP1-204ENST00000505804 GNB2P62879 340 aa2.77□□□□□ -1.97
TOPBP1-204ENST00000505804 ZNF45Q02386 682 aa2.77□□□□□ -1.97
TOPBP1-204ENST00000505804 HERPUD1Q15011 391 aa2.77□□□□□ -1.97
TOPBP1-204ENST00000505804 C2orf83Q53S99 150 aa2.77□□□□□ -1.97
TOPBP1-204ENST00000505804 TMEM41BQ5BJD5 291 aa2.77□□□□□ -1.97
TOPBP1-204ENST00000505804 ATF7IP2Q5U623 682 aa2.77□□□□□ -1.97
TOPBP1-204ENST00000505804 OTPQ5XKR4 325 aa2.77□□□□□ -1.97
TOPBP1-204ENST00000505804 SULT1C3Q6IMI6 304 aa2.77□□□□□ -1.97
TOPBP1-204ENST00000505804 AFTPHQ6ULP2 937 aa2.77□□□□□ -1.97
TOPBP1-204ENST00000505804 ZNF589Q86UQ0 364 aaPredicted RBP2.77□□□□□ -1.97
TOPBP1-204ENST00000505804 PPP1R27Q86WC6 154 aa2.77□□□□□ -1.97
TOPBP1-204ENST00000505804 TMEM17Q86X19 198 aa2.77□□□□□ -1.97
TOPBP1-204ENST00000505804 ZNF573Q86YE8 665 aa2.77□□□□□ -1.97
TOPBP1-204ENST00000505804 CENPLQ8N0S6 344 aaPredicted RBP2.77□□□□□ -1.97
TOPBP1-204ENST00000505804 BBS1Q8NFJ9 593 aa2.77□□□□□ -1.97
TOPBP1-204ENST00000505804 ANKRD49Q8WVL7 239 aa2.77□□□□□ -1.97
TOPBP1-204ENST00000505804 CELF6Q96J87 481 aaKnown RBP2.77□□□□□ -1.97
TOPBP1-204ENST00000505804 NICN1Q9BSH3 213 aa2.77□□□□□ -1.97
TOPBP1-204ENST00000505804 ZNF416Q9BWM5 594 aa2.77□□□□□ -1.97
TOPBP1-204ENST00000505804 DUSP16Q9BY84 665 aa2.77□□□□□ -1.97
TOPBP1-204ENST00000505804 CRNKL1Q9BZJ0 848 aaKnown RBP2.77□□□□□ -1.97
TOPBP1-204ENST00000505804 DPH5Q9H2P9 285 aa2.77□□□□□ -1.97
TOPBP1-204ENST00000505804 ANGPTL2Q9UKU9 493 aa2.77□□□□□ -1.97
TOPBP1-204ENST00000505804 UBQLN1Q9UMX0 589 aaKnown RBP2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms