RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 ZNF404Q494X3 552 aa15.96■□□□□ 0.15
TRAPPC11-204ENST00000505676 AADACL4Q5VUY2 407 aa15.96■□□□□ 0.15
TRAPPC11-204ENST00000505676 LYSMD4Q5XG99 296 aa15.96■□□□□ 0.15
TRAPPC11-204ENST00000505676 ULK3Q6PHR2 472 aa15.96■□□□□ 0.15
TRAPPC11-204ENST00000505676 NPSR1Q6W5P4 371 aa15.96■□□□□ 0.15
TRAPPC11-204ENST00000505676 ARHGAP22Q7Z5H3 698 aa15.96■□□□□ 0.15
TRAPPC11-204ENST00000505676 SLC35F3Q8IY50 421 aa15.96■□□□□ 0.15
TRAPPC11-204ENST00000505676 RCBTB1Q8NDN9 531 aa15.96■□□□□ 0.15
TRAPPC11-204ENST00000505676 DNAJA4Q8WW22 397 aaPredicted RBP15.96■□□□□ 0.15
TRAPPC11-204ENST00000505676 RNFT2Q96EX2 444 aa15.96■□□□□ 0.15
TRAPPC11-204ENST00000505676 OPALINQ96PE5 141 aa15.96■□□□□ 0.15
TRAPPC11-204ENST00000505676 OR5M11Q96RB7 305 aa15.96■□□□□ 0.15
TRAPPC11-204ENST00000505676 NTNG1Q9Y2I2 539 aa15.96■□□□□ 0.15
TRAPPC11-204ENST00000505676 CEP192Q8TEP8 1941 aa15.96■□□□□ 0.15
TRAPPC11-204ENST00000505676 A0A1B0GVT2 93 aa15.96■□□□□ 0.15
TRAPPC11-204ENST00000505676 FAM86C2PA6NEL3 165 aa15.96■□□□□ 0.15
TRAPPC11-204ENST00000505676 IGF2P01344 180 aa15.96■□□□□ 0.15
TRAPPC11-204ENST00000505676 GKN3PP0CG01 181 aa15.96■□□□□ 0.15
TRAPPC11-204ENST00000505676 CT45A8P0DMV1 189 aa15.96■□□□□ 0.15
TRAPPC11-204ENST00000505676 CT45A9P0DMV2 189 aa15.96■□□□□ 0.15
TRAPPC11-204ENST00000505676 IFI30P13284 250 aa15.96■□□□□ 0.15
TRAPPC11-204ENST00000505676 MAOAP21397 527 aa15.96■□□□□ 0.15
TRAPPC11-204ENST00000505676 HTR1FP30939 366 aa15.96■□□□□ 0.15
TRAPPC11-204ENST00000505676 CDH11P55287 796 aa15.96■□□□□ 0.15
TRAPPC11-204ENST00000505676 MLLT1Q03111 559 aaPredicted RBP15.96■□□□□ 0.15
TRAPPC11-204ENST00000505676 CT45A2Q5DJT8 189 aa15.96■□□□□ 0.15
TRAPPC11-204ENST00000505676 ATCAYQ86WG3 371 aa15.96■□□□□ 0.15
TRAPPC11-204ENST00000505676 RPL3LQ92901 407 aaKnown RBP15.96■□□□□ 0.15
TRAPPC11-204ENST00000505676 BPIFA2Q96DR5 249 aa15.96■□□□□ 0.15
TRAPPC11-204ENST00000505676 NXF2Q9GZY0 626 aaKnown RBP15.96■□□□□ 0.15
TRAPPC11-204ENST00000505676 OR52D1Q9H346 318 aa15.96■□□□□ 0.15
TRAPPC11-204ENST00000505676 ZNF768Q9H5H4 540 aaKnown RBP15.96■□□□□ 0.15
TRAPPC11-204ENST00000505676 NDUFB11Q9NX14 153 aa15.96■□□□□ 0.15
TRAPPC11-204ENST00000505676 RPS6KB2Q9UBS0 482 aa15.96■□□□□ 0.15
TRAPPC11-204ENST00000505676 SRPK3Q9UPE1 567 aa15.96■□□□□ 0.15
TRAPPC11-204ENST00000505676 IGKV3D-11A0A0A0MRZ8 115 aa15.95■□□□□ 0.14
TRAPPC11-204ENST00000505676 ARHGAP33O14559 1287 aa15.95■□□□□ 0.14
TRAPPC11-204ENST00000505676 PIP5K1CO60331 668 aa15.95■□□□□ 0.14
TRAPPC11-204ENST00000505676 RORAP35398 523 aa15.95■□□□□ 0.14
TRAPPC11-204ENST00000505676 OPRL1P41146 370 aa15.95■□□□□ 0.14
TRAPPC11-204ENST00000505676 ACAA2P42765 397 aaKnown RBP15.95■□□□□ 0.14
TRAPPC11-204ENST00000505676 PPICP45877 212 aa15.95■□□□□ 0.14
TRAPPC11-204ENST00000505676 WNT4P56705 351 aa15.95■□□□□ 0.14
TRAPPC11-204ENST00000505676 ELAVL1Q15717 326 aaKnown RBP15.95■□□□□ 0.14
TRAPPC11-204ENST00000505676 NKAIN2Q5VXU1 208 aa15.95■□□□□ 0.14
TRAPPC11-204ENST00000505676 SLC25A45Q8N413 288 aa15.95■□□□□ 0.14
TRAPPC11-204ENST00000505676 LNX2Q8N448 690 aa15.95■□□□□ 0.14
TRAPPC11-204ENST00000505676 SLC15A4Q8N697 577 aa15.95■□□□□ 0.14
TRAPPC11-204ENST00000505676 BCORP1Q8N888 145 aa15.95■□□□□ 0.14
TRAPPC11-204ENST00000505676 PSD4Q8NDX1 1056 aa15.95■□□□□ 0.14
TRAPPC11-204ENST00000505676 OR4Q3Q8NH05 313 aa15.95■□□□□ 0.14
TRAPPC11-204ENST00000505676 MCFD2Q8NI22 146 aa15.95■□□□□ 0.14
TRAPPC11-204ENST00000505676 DOK4Q8TEW6 326 aa15.95■□□□□ 0.14
TRAPPC11-204ENST00000505676 CNOT9Q92600 299 aaKnown RBP15.95■□□□□ 0.14
TRAPPC11-204ENST00000505676 PTCHD1Q96NR3 888 aa15.95■□□□□ 0.14
TRAPPC11-204ENST00000505676 DPYSL5Q9BPU6 564 aa15.95■□□□□ 0.14
TRAPPC11-204ENST00000505676 UBQLN3Q9H347 655 aa15.95■□□□□ 0.14
TRAPPC11-204ENST00000505676 HHATLQ9HCP6 504 aa15.95■□□□□ 0.14
TRAPPC11-204ENST00000505676 EXOGQ9Y2C4 368 aaKnown RBP15.95■□□□□ 0.14
TRAPPC11-204ENST00000505676 NPIPA5A0A0B4J1W7 369 aa15.95■□□□□ 0.14
TRAPPC11-204ENST00000505676 SERINC4A6NH21 518 aa15.95■□□□□ 0.14
TRAPPC11-204ENST00000505676 C17orf105B2RV13 164 aa15.95■□□□□ 0.14
TRAPPC11-204ENST00000505676 NPIPA7E9PJI5 369 aa15.95■□□□□ 0.14
TRAPPC11-204ENST00000505676 PPM1BO75688 479 aa15.95■□□□□ 0.14
TRAPPC11-204ENST00000505676 CDC123O75794 336 aaPredicted RBP15.95■□□□□ 0.14
TRAPPC11-204ENST00000505676 NPIPA8P0DM63 369 aa15.95■□□□□ 0.14
TRAPPC11-204ENST00000505676 PGDP52209 483 aa15.95■□□□□ 0.14
TRAPPC11-204ENST00000505676 GAS1P54826 345 aa15.95■□□□□ 0.14
TRAPPC11-204ENST00000505676 COPZ1P61923 177 aa15.95■□□□□ 0.14
TRAPPC11-204ENST00000505676 TTLL10Q6ZVT0 673 aa15.95■□□□□ 0.14
TRAPPC11-204ENST00000505676 WDR5BQ86VZ2 330 aa15.95■□□□□ 0.14
TRAPPC11-204ENST00000505676 SLC19A3Q9BZV2 496 aa15.95■□□□□ 0.14
TRAPPC11-204ENST00000505676 EXOSC3Q9NQT5 275 aaKnown RBP15.95■□□□□ 0.14
TRAPPC11-204ENST00000505676 STUB1Q9UNE7 303 aa15.95■□□□□ 0.14
TRAPPC11-204ENST00000505676 A0A1B0GWA3 101 aa15.94■□□□□ 0.14
TRAPPC11-204ENST00000505676 A0A1B0GX78 115 aa15.94■□□□□ 0.14
TRAPPC11-204ENST00000505676 FRG2CA6NGY1 282 aa15.94■□□□□ 0.14
TRAPPC11-204ENST00000505676 METTL15A6NJ78 407 aa15.94■□□□□ 0.14
TRAPPC11-204ENST00000505676 IGKV1D-16P01601 117 aa15.94■□□□□ 0.14
TRAPPC11-204ENST00000505676 FBLP22087 321 aaKnown RBP15.94■□□□□ 0.14
TRAPPC11-204ENST00000505676 CAPZA2P47755 286 aa15.94■□□□□ 0.14
TRAPPC11-204ENST00000505676 MLLT10P55197 1068 aa15.94■□□□□ 0.14
TRAPPC11-204ENST00000505676 C11orf91Q3C1V1 193 aa15.94■□□□□ 0.14
TRAPPC11-204ENST00000505676 CLEC12AQ5QGZ9 265 aa15.94■□□□□ 0.14
TRAPPC11-204ENST00000505676 SLC30A6Q6NXT4 461 aa15.94■□□□□ 0.14
TRAPPC11-204ENST00000505676 SMARCD3Q6STE5 483 aa15.94■□□□□ 0.14
TRAPPC11-204ENST00000505676 ZAR1Q86SH2 424 aa15.94■□□□□ 0.14
TRAPPC11-204ENST00000505676 TMCO5AQ8N6Q1 288 aa15.94■□□□□ 0.14
TRAPPC11-204ENST00000505676 ZNF614Q8N883 585 aa15.94■□□□□ 0.14
TRAPPC11-204ENST00000505676 OR14A16Q8NHC5 309 aa15.94■□□□□ 0.14
TRAPPC11-204ENST00000505676 SAMD8Q96LT4 415 aa15.94■□□□□ 0.14
TRAPPC11-204ENST00000505676 ZBTB20Q9HC78 741 aaPredicted RBP15.94■□□□□ 0.14
TRAPPC11-204ENST00000505676 ZNF304Q9HCX3 659 aa15.94■□□□□ 0.14
TRAPPC11-204ENST00000505676 KLHL3Q9UH77 587 aa15.94■□□□□ 0.14
TRAPPC11-204ENST00000505676 THADAQ6YHU6 1953 aa15.94■□□□□ 0.14
TRAPPC11-204ENST00000505676 CDC42EP2O14613 210 aa15.94■□□□□ 0.14
TRAPPC11-204ENST00000505676 ANKRD34CP0C6C1 535 aa15.94■□□□□ 0.14
TRAPPC11-204ENST00000505676 GIMD1P0DJR0 217 aa15.94■□□□□ 0.14
TRAPPC11-204ENST00000505676 CPEP16870 476 aa15.94■□□□□ 0.14
TRAPPC11-204ENST00000505676 SLC9A3P48764 834 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms