RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 RLN2P04090 185 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 FGF3P11487 239 aaPredicted RBP3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 POU3F2P20265 443 aaPredicted RBP3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 CALCRP30988 508 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 SSTR4P31391 388 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 GJA4P35212 333 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 ARL2P36404 184 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 CD200P41217 278 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 ASPAP45381 313 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 GPR143P51810 404 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 PDX1P52945 283 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 ARF3P61204 181 aaPredicted RBP3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 SKP1P63208 163 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 ADAM8P78325 824 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 ARF1P84077 181 aaKnown RBP3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 ID2Q02363 134 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 TSPAN31Q12999 210 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 TUSC3Q13454 348 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 ZNF404Q494X3 552 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 FAM72AQ5TYM5 149 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 MBLAC2Q68D91 279 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 OR2T5Q6IEZ7 315 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 FAM72DQ6L9T8 149 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 HSDL2Q6YN16 418 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 PLPPR4Q7Z2D5 763 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 DPPA2Q7Z7J5 298 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 FAM72BQ86X60 149 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 LDLRAD3Q86YD5 345 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 ZNF383Q8NA42 475 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 BVESQ8NE79 360 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 OR2T29Q8NH02 315 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 OR5K1Q8NHB7 308 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 GRHL3Q8TE85 626 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 CASTOR1Q8WTX7 329 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 SLC35F5Q8WV83 523 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 DOCK10Q96BY6 2186 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 SLC25A36Q96CQ1 311 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 C12orf66Q96MD2 445 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 DPH2Q9BQC3 489 aaPredicted RBP3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 KXD1Q9BQD3 176 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 SPATA5L1Q9BVQ7 753 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 SNHG12Q9BXW3 62 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 MTIF3Q9H2K0 278 aaKnown RBP3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 NIPAL2Q9H841 368 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 TREM1Q9NP99 234 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 DECR2Q9NUI1 292 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 ALKBH4Q9NXW9 302 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 TAS2R3Q9NYW6 316 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 FZD4Q9ULV1 537 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 FZD10Q9ULW2 581 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 PLCL2Q9UPR0 1127 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 POFUT2Q9Y2G5 429 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 COQ4Q9Y3A0 265 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 CACNA1IQ9P0X4 2223 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 MIA3Q5JRA6 1907 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 PDCD11Q14690 1871 aaKnown RBP3.44□□□□□ -1.86
PCDH11X-208ENST00000504220 A0A1W2PRB8 838 aa3.44□□□□□ -1.86
PCDH11X-208ENST00000504220 TRBC2A0A5B9 178 aa3.44□□□□□ -1.86
PCDH11X-208ENST00000504220 AGAP5A6NIR3 686 aa3.44□□□□□ -1.86
PCDH11X-208ENST00000504220 FAM159BA6NKW6 160 aa3.44□□□□□ -1.86
PCDH11X-208ENST00000504220 RHPN2P1A8MT19 583 aa3.44□□□□□ -1.86
PCDH11X-208ENST00000504220 GPR89AB7ZAQ6 455 aa3.44□□□□□ -1.86
PCDH11X-208ENST00000504220 WASH3PC4AMC7 463 aa3.44□□□□□ -1.86
PCDH11X-208ENST00000504220 J3QLW9 94 aa3.44□□□□□ -1.86
PCDH11X-208ENST00000504220 PLA2G10O15496 165 aa3.44□□□□□ -1.86
PCDH11X-208ENST00000504220 OR1I1O60431 355 aa3.44□□□□□ -1.86
PCDH11X-208ENST00000504220 MITFO75030 526 aaPredicted RBP3.44□□□□□ -1.86
PCDH11X-208ENST00000504220 KRT33AO76009 404 aa3.44□□□□□ -1.86
PCDH11X-208ENST00000504220 CLDN7O95471 211 aa3.44□□□□□ -1.86
PCDH11X-208ENST00000504220 APOC3P02656 99 aa3.44□□□□□ -1.86
PCDH11X-208ENST00000504220 MT-ND2P03891 347 aa3.44□□□□□ -1.86
PCDH11X-208ENST00000504220 BCHEP06276 602 aa3.44□□□□□ -1.86
PCDH11X-208ENST00000504220 KLK1P06870 262 aa3.44□□□□□ -1.86
PCDH11X-208ENST00000504220 EPHX1P07099 455 aa3.44□□□□□ -1.86
PCDH11X-208ENST00000504220 SNRNP70P08621 437 aaKnown RBP3.44□□□□□ -1.86
PCDH11X-208ENST00000504220 NMBP08949 121 aa3.44□□□□□ -1.86
PCDH11X-208ENST00000504220 MRPL3P09001 348 aaKnown RBP3.44□□□□□ -1.86
PCDH11X-208ENST00000504220 GPR89BP0CG08 455 aa3.44□□□□□ -1.86
PCDH11X-208ENST00000504220 PRSS56P0CW18 603 aa3.44□□□□□ -1.86
PCDH11X-208ENST00000504220 ZNF19P17023 458 aa3.44□□□□□ -1.86
PCDH11X-208ENST00000504220 AGAP20933 346 aa3.44□□□□□ -1.86
PCDH11X-208ENST00000504220 EIF1AXP47813 144 aaKnown RBP3.44□□□□□ -1.86
PCDH11X-208ENST00000504220 HLCSP50747 726 aa3.44□□□□□ -1.86
PCDH11X-208ENST00000504220 SMSP52788 366 aa3.44□□□□□ -1.86
PCDH11X-208ENST00000504220 FXYD6P3P58550 94 aa3.44□□□□□ -1.86
PCDH11X-208ENST00000504220 NFKB2Q00653 900 aa3.44□□□□□ -1.86
PCDH11X-208ENST00000504220 PTP4A2Q12974 167 aa3.44□□□□□ -1.86
PCDH11X-208ENST00000504220 BAK1Q16611 211 aa3.44□□□□□ -1.86
PCDH11X-208ENST00000504220 BTBD16Q32M84 506 aa3.44□□□□□ -1.86
PCDH11X-208ENST00000504220 IRAK1BP1Q5VVH5 260 aa3.44□□□□□ -1.86
PCDH11X-208ENST00000504220 LIPKQ5VXJ0 399 aa3.44□□□□□ -1.86
PCDH11X-208ENST00000504220 PTCRAQ6ISU1 281 aaPredicted RBP3.44□□□□□ -1.86
PCDH11X-208ENST00000504220 HEPHL1Q6MZM0 1159 aa3.44□□□□□ -1.86
PCDH11X-208ENST00000504220 FBXL22Q6P050 247 aa3.44□□□□□ -1.86
PCDH11X-208ENST00000504220 EPGNQ6UW88 154 aa3.44□□□□□ -1.86
PCDH11X-208ENST00000504220 SLC36A4Q6YBV0 504 aa3.44□□□□□ -1.86
PCDH11X-208ENST00000504220 SPNS3Q6ZMD2 512 aa3.44□□□□□ -1.86
PCDH11X-208ENST00000504220 ZNF627Q7L945 461 aa3.44□□□□□ -1.86
PCDH11X-208ENST00000504220 TIPARPQ7Z3E1 657 aaKnown RBP3.44□□□□□ -1.86
PCDH11X-208ENST00000504220 SPNS2Q8IVW8 549 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms