RNA–Protein interactions for RNA: ENST00000502848.5

NR1I3-216, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 914 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-216ENST00000502848 OPN5Q6U736 354 aa8.34□□□□□ -1.07
NR1I3-216ENST00000502848 KIRREL2Q6UWL6 708 aa8.34□□□□□ -1.07
NR1I3-216ENST00000502848 SHISA6Q6ZSJ9 500 aa8.34□□□□□ -1.07
NR1I3-216ENST00000502848 TMPRSS7Q7RTY8 843 aa8.34□□□□□ -1.07
NR1I3-216ENST00000502848 TSPYL5Q86VY4 417 aaPredicted RBP8.34□□□□□ -1.07
NR1I3-216ENST00000502848 DTX1Q86Y01 620 aa8.34□□□□□ -1.07
NR1I3-216ENST00000502848 LACC1Q8IV20 430 aa8.34□□□□□ -1.07
NR1I3-216ENST00000502848 GPALPP1Q8IXQ4 340 aa8.34□□□□□ -1.07
NR1I3-216ENST00000502848 CLDN22Q8N7P3 220 aa8.34□□□□□ -1.07
NR1I3-216ENST00000502848 OR4K5Q8NGD3 323 aa8.34□□□□□ -1.07
NR1I3-216ENST00000502848 OR4C3Q8NH37 302 aa8.34□□□□□ -1.07
NR1I3-216ENST00000502848 GATA6Q92908 595 aa8.34□□□□□ -1.07
NR1I3-216ENST00000502848 ARSGQ96EG1 525 aa8.34□□□□□ -1.07
NR1I3-216ENST00000502848 SLC41A3Q96GZ6 507 aa8.34□□□□□ -1.07
NR1I3-216ENST00000502848 HRASLS5Q96KN8 279 aa8.34□□□□□ -1.07
NR1I3-216ENST00000502848 FEVQ99581 238 aa8.34□□□□□ -1.07
NR1I3-216ENST00000502848 APOL4Q9BPW4 351 aa8.34□□□□□ -1.07
NR1I3-216ENST00000502848 ZNF426Q9BUY5 554 aa8.34□□□□□ -1.07
NR1I3-216ENST00000502848 DEFB126Q9BYW3 111 aa8.34□□□□□ -1.07
NR1I3-216ENST00000502848 LAT2Q9GZY6 243 aa8.34□□□□□ -1.07
NR1I3-216ENST00000502848 TOR3AQ9H497 397 aa8.34□□□□□ -1.07
NR1I3-216ENST00000502848 ZNF696Q9H7X3 374 aa8.34□□□□□ -1.07
NR1I3-216ENST00000502848 AKIRIN1Q9H9L7 192 aaPredicted RBP8.34□□□□□ -1.07
NR1I3-216ENST00000502848 FBXO34Q9NWN3 711 aa8.34□□□□□ -1.07
NR1I3-216ENST00000502848 FAM118AQ9NWS6 357 aa8.34□□□□□ -1.07
NR1I3-216ENST00000502848 FOXJ2Q9P0K8 574 aa8.34□□□□□ -1.07
NR1I3-216ENST00000502848 A0A0C4DFX4 3053 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 SPTBP11277 2137 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 IGLV3-32A0A0A0MS00 114 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 A0A0B4J2E0 115 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 TRBV4-1A0A0J9YWV2 114 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 CENPVL1A0A0U1RR11 272 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 A0A1B0GX12 115 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 TMEM200CA6NKL6 621 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 ZNF264O43296 627 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 MPZL2O60487 215 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 RAD1O60671 282 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 TPST2O60704 377 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 NME6O75414 186 aaPredicted RBP8.33□□□□□ -1.08
NR1I3-216ENST00000502848 SERPINA7P05543 415 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 FBXO45P0C2W1 286 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 PNMTP11086 282 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 CYP4B1P13584 511 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 FPR3P25089 353 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 MSX1P28360 303 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 EVI2BP34910 448 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 ACAA2P42765 397 aaKnown RBP8.33□□□□□ -1.08
NR1I3-216ENST00000502848 MAP2K6P52564 334 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 DLX5P56178 289 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 CTBP2P56545 445 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 COPZ1P61923 177 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 CSNK2BP67870 215 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 PLAURQ03405 335 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 NPRL3Q12980 569 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 GANABQ14697 944 aaKnown RBP8.33□□□□□ -1.08
NR1I3-216ENST00000502848 RTP5Q14D33 572 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 OR1Q1Q15612 314 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 NNATQ16517 81 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 NTRK2Q16620 822 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 BTBD16Q32M84 506 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 CRTC2Q53ET0 693 aaPredicted RBP8.33□□□□□ -1.08
NR1I3-216ENST00000502848 C6orf52Q5T4I8 152 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 RPL13AP3Q6NVV1 102 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 H3F3CQ6NXT2 135 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 PGBD2Q6P3X8 592 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 PODNL1Q6PEZ8 512 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 C5orf46Q6UWT4 87 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 MBOAT2Q6ZWT7 520 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 RRM2BQ7LG56 351 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 OLIG3Q7RTU3 272 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 ASCL5Q7RTU5 278 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 PPP1R32Q7Z5V6 425 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 RBM45Q8IUH3 476 aaKnown RBP8.33□□□□□ -1.08
NR1I3-216ENST00000502848 C8orf59Q8N0T1 100 aaPredicted RBP8.33□□□□□ -1.08
NR1I3-216ENST00000502848 SLC5A8Q8N695 610 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 POGLUT1Q8NBL1 392 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 PIGXQ8TBF5 258 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 DOK4Q8TEW6 326 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 FBLIM1Q8WUP2 373 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 CYGBQ8WWM9 190 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 CNOT9Q92600 299 aaKnown RBP8.33□□□□□ -1.08
NR1I3-216ENST00000502848 KIAA1143Q96AT1 154 aaPredicted RBP8.33□□□□□ -1.08
NR1I3-216ENST00000502848 EFHD2Q96C19 240 aaPredicted RBP8.33□□□□□ -1.08
NR1I3-216ENST00000502848 DTNBP1Q96EV8 351 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 ADOQ96SZ5 270 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 MBOAT4Q96T53 435 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 TBL1XR1Q9BZK7 514 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 UCK2Q9BZX2 261 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 SMURF2Q9HAU4 748 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 CPNE5Q9HCH3 593 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 BATF3Q9NR55 127 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 SDHAF3Q9NRP4 125 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 RLIMQ9NVW2 624 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 SELENONQ9NZV5 590 aa8.33□□□□□ -1.08
NR1I3-216ENST00000502848 NDRG4Q9ULP0 352 aaKnown RBP8.33□□□□□ -1.08
NR1I3-216ENST00000502848 YARS2Q9Y2Z4 477 aaKnown RBP8.33□□□□□ -1.08
NR1I3-216ENST00000502848 A0A087WUU8 490 aa8.32□□□□□ -1.08
NR1I3-216ENST00000502848 LOC100130705A0A1B0GUX0 176 aa8.32□□□□□ -1.08
NR1I3-216ENST00000502848 SPAARA0A1B0GVQ0 90 aa8.32□□□□□ -1.08
NR1I3-216ENST00000502848 TRIM64A6NGJ6 449 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms