RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 MAL2Q969L2 176 aa15.19■□□□□ 0.02
PRKCB-210ENST00000498739 CCDC120Q96HB5 630 aa15.19■□□□□ 0.02
PRKCB-210ENST00000498739 ANKRD27Q96NW4 1050 aa15.19■□□□□ 0.02
PRKCB-210ENST00000498739 KLHDC3Q9BQ90 382 aa15.19■□□□□ 0.02
PRKCB-210ENST00000498739 VKORC1Q9BQB6 163 aa15.19■□□□□ 0.02
PRKCB-210ENST00000498739 THUMPD3Q9BV44 507 aaKnown RBP15.19■□□□□ 0.02
PRKCB-210ENST00000498739 CCDC106Q9BWC9 280 aa15.19■□□□□ 0.02
PRKCB-210ENST00000498739 PRDM14Q9GZV8 571 aa15.19■□□□□ 0.02
PRKCB-210ENST00000498739 MTHFD2LQ9H903 347 aaPredicted RBP15.19■□□□□ 0.02
PRKCB-210ENST00000498739 A4GALTQ9NPC4 353 aa15.19■□□□□ 0.02
PRKCB-210ENST00000498739 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.19■□□□□ 0.02
PRKCB-210ENST00000498739 GMEB1Q9Y692 573 aa15.19■□□□□ 0.02
PRKCB-210ENST00000498739 TENM4Q6N022 2769 aa15.18■□□□□ 0.02
PRKCB-210ENST00000498739 A0A087WZY1 265 aa15.18■□□□□ 0.02
PRKCB-210ENST00000498739 AGAP5A6NIR3 686 aa15.18■□□□□ 0.02
PRKCB-210ENST00000498739 CLDN24A6NM45 220 aa15.18■□□□□ 0.02
PRKCB-210ENST00000498739 SHISA8B8ZZ34 492 aa15.18■□□□□ 0.02
PRKCB-210ENST00000498739 C5orf58C9J3I9 102 aa15.18■□□□□ 0.02
PRKCB-210ENST00000498739 EIF4E2O60573 245 aaKnown RBP15.18■□□□□ 0.02
PRKCB-210ENST00000498739 ZG16O60844 167 aa15.18■□□□□ 0.02
PRKCB-210ENST00000498739 WDR1O75083 606 aa15.18■□□□□ 0.02
PRKCB-210ENST00000498739 UBTFL6P0CB48 400 aaPredicted RBP15.18■□□□□ 0.02
PRKCB-210ENST00000498739 GPX2P18283 190 aa15.18■□□□□ 0.02
PRKCB-210ENST00000498739 CHMP24386 653 aa15.18■□□□□ 0.02
PRKCB-210ENST00000498739 ACVR2AP27037 513 aa15.18■□□□□ 0.02
PRKCB-210ENST00000498739 ADH7P40394 386 aa15.18■□□□□ 0.02
PRKCB-210ENST00000498739 STARP49675 285 aa15.18■□□□□ 0.02
PRKCB-210ENST00000498739 B3GALT5-AS1P59052 145 aa15.18■□□□□ 0.02
PRKCB-210ENST00000498739 SELPLGQ14242 412 aa15.18■□□□□ 0.02
PRKCB-210ENST00000498739 GLYR1Q49A26 553 aaPredicted RBP15.18■□□□□ 0.02
PRKCB-210ENST00000498739 PM20D2Q8IYS1 436 aa15.18■□□□□ 0.02
PRKCB-210ENST00000498739 ULK2Q8IYT8 1036 aa15.18■□□□□ 0.02
PRKCB-210ENST00000498739 RPRMLQ8N4K4 120 aa15.18■□□□□ 0.02
PRKCB-210ENST00000498739 POU5F2Q8N7G0 328 aa15.18■□□□□ 0.02
PRKCB-210ENST00000498739 TOR1AIP2Q8NFQ8 470 aa15.18■□□□□ 0.02
PRKCB-210ENST00000498739 RP9Q8TA86 221 aaKnown RBP15.18■□□□□ 0.02
PRKCB-210ENST00000498739 WDR60Q8WVS4 1066 aa15.18■□□□□ 0.02
PRKCB-210ENST00000498739 WDYHV1Q96HA8 205 aa15.18■□□□□ 0.02
PRKCB-210ENST00000498739 PIGQQ9BRB3 760 aa15.18■□□□□ 0.02
PRKCB-210ENST00000498739 MED17Q9NVC6 651 aa15.18■□□□□ 0.02
PRKCB-210ENST00000498739 ICAM5Q9UMF0 924 aa15.18■□□□□ 0.02
PRKCB-210ENST00000498739 SLC35A3Q9Y2D2 325 aa15.18■□□□□ 0.02
PRKCB-210ENST00000498739 NBASA2RRP1 2371 aa15.18■□□□□ 0.02
PRKCB-210ENST00000498739 RELNP78509 3460 aa15.18■□□□□ 0.02
PRKCB-210ENST00000498739 DSPPQ9NZW4 1301 aa15.17■□□□□ 0.02
PRKCB-210ENST00000498739 ESPL1Q14674 2120 aa15.17■□□□□ 0.02
PRKCB-210ENST00000498739 A0A0G2JPF8 293 aa15.17■□□□□ 0.02
PRKCB-210ENST00000498739 OR2M5A3KFT3 312 aa15.17■□□□□ 0.02
PRKCB-210ENST00000498739 HNRNPCL2B2RXH8 293 aa15.17■□□□□ 0.02
PRKCB-210ENST00000498739 HNRNPCL3B7ZW38 293 aa15.17■□□□□ 0.02
PRKCB-210ENST00000498739 H3BML4 177 aa15.17■□□□□ 0.02
PRKCB-210ENST00000498739 HNRNPCL1O60812 293 aaKnown RBP15.17■□□□□ 0.02
PRKCB-210ENST00000498739 DBIP07108 87 aaKnown RBP15.17■□□□□ 0.02
PRKCB-210ENST00000498739 HNRNPCL4P0DMR1 293 aa15.17■□□□□ 0.02
PRKCB-210ENST00000498739 ARAFP10398 606 aa15.17■□□□□ 0.02
PRKCB-210ENST00000498739 GABRA1P14867 456 aa15.17■□□□□ 0.02
PRKCB-210ENST00000498739 IL7RP16871 459 aa15.17■□□□□ 0.02
PRKCB-210ENST00000498739 PGM1P36871 562 aa15.17■□□□□ 0.02
PRKCB-210ENST00000498739 SUMO3P55854 103 aaPredicted RBP15.17■□□□□ 0.02
PRKCB-210ENST00000498739 KCNJ10P78508 379 aa15.17■□□□□ 0.02
PRKCB-210ENST00000498739 SRYQ05066 204 aa15.17■□□□□ 0.02
PRKCB-210ENST00000498739 SKP2Q13309 424 aa15.17■□□□□ 0.02
PRKCB-210ENST00000498739 PLPPR5Q32ZL2 321 aa15.17■□□□□ 0.02
PRKCB-210ENST00000498739 C1orf185Q5T7R7 199 aa15.17■□□□□ 0.02
PRKCB-210ENST00000498739 PEX5LQ8IYB4 626 aa15.17■□□□□ 0.02
PRKCB-210ENST00000498739 PCYOX1LQ8NBM8 494 aa15.17■□□□□ 0.02
PRKCB-210ENST00000498739 OR5W2Q8NH69 310 aa15.17■□□□□ 0.02
PRKCB-210ENST00000498739 NFKBIDQ8NI38 313 aa15.17■□□□□ 0.02
PRKCB-210ENST00000498739 BBS10Q8TAM1 723 aa15.17■□□□□ 0.02
PRKCB-210ENST00000498739 PHF10Q8WUB8 498 aaKnown RBP15.17■□□□□ 0.02
PRKCB-210ENST00000498739 PMM1Q92871 262 aa15.17■□□□□ 0.02
PRKCB-210ENST00000498739 ZBTB8AQ96BR9 441 aa15.17■□□□□ 0.02
PRKCB-210ENST00000498739 DMRTA2Q96SC8 542 aa15.17■□□□□ 0.02
PRKCB-210ENST00000498739 NPAS1Q99742 590 aa15.17■□□□□ 0.02
PRKCB-210ENST00000498739 TREX2Q9BQ50 279 aaPredicted RBP15.17■□□□□ 0.02
PRKCB-210ENST00000498739 SLC39A3Q9BRY0 314 aa15.17■□□□□ 0.02
PRKCB-210ENST00000498739 LAT2Q9GZY6 243 aa15.17■□□□□ 0.02
PRKCB-210ENST00000498739 CACYBPQ9HB71 228 aaKnown RBP15.17■□□□□ 0.02
PRKCB-210ENST00000498739 SVILO95425 2214 aa15.17■□□□□ 0.02
PRKCB-210ENST00000498739 ZGRF1Q86YA3 2104 aa15.16■□□□□ 0.02
PRKCB-210ENST00000498739 H0Y3Z8 333 aa15.16■□□□□ 0.02
PRKCB-210ENST00000498739 BCAS1O75363 584 aaPredicted RBP15.16■□□□□ 0.02
PRKCB-210ENST00000498739 COX4I1P13073 169 aa15.16■□□□□ 0.02
PRKCB-210ENST00000498739 CPN1P15169 458 aa15.16■□□□□ 0.02
PRKCB-210ENST00000498739 ZNF17P17021 662 aa15.16■□□□□ 0.02
PRKCB-210ENST00000498739 POU3F2P20265 443 aaPredicted RBP15.16■□□□□ 0.02
PRKCB-210ENST00000498739 RPS4Y1P22090 263 aaKnown RBP15.16■□□□□ 0.02
PRKCB-210ENST00000498739 LHX2P50458 406 aa15.16■□□□□ 0.02
PRKCB-210ENST00000498739 ADORA2A-AS1P86434 159 aa15.16■□□□□ 0.02
PRKCB-210ENST00000498739 CDK6Q00534 326 aa15.16■□□□□ 0.02
PRKCB-210ENST00000498739 CBFBQ13951 182 aa15.16■□□□□ 0.02
PRKCB-210ENST00000498739 TOMM34Q15785 309 aaPredicted RBP15.16■□□□□ 0.02
PRKCB-210ENST00000498739 CYP51A1Q16850 503 aa15.16■□□□□ 0.02
PRKCB-210ENST00000498739 RTL6Q6ICC9 239 aa15.16■□□□□ 0.02
PRKCB-210ENST00000498739 TMEM211Q6ICI0 200 aa15.16■□□□□ 0.02
PRKCB-210ENST00000498739 NANOGP8Q6NSW7 305 aa15.16■□□□□ 0.02
PRKCB-210ENST00000498739 B3GNT6Q6ZMB0 384 aa15.16■□□□□ 0.02
PRKCB-210ENST00000498739 PIGWQ7Z7B1 504 aa15.16■□□□□ 0.02
PRKCB-210ENST00000498739 VRK2Q86Y07 508 aa15.16■□□□□ 0.02
PRKCB-210ENST00000498739 TREML1Q86YW5 311 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms