RNA–Protein interactions for RNA: ENST00000498514.5

SGMS1-205, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-205ENST00000498514 RICTORQ6R327 1708 aa0.59□□□□□ -2.31
SGMS1-205ENST00000498514 SPTBN1Q01082 2364 aaKnown RBP0.59□□□□□ -2.31
SGMS1-205ENST00000498514 NUP160Q12769 1436 aa0.59□□□□□ -2.31
SGMS1-205ENST00000498514 FGD6Q6ZV73 1430 aa0.59□□□□□ -2.31
SGMS1-205ENST00000498514 PTPRUQ92729 1446 aa0.59□□□□□ -2.31
SGMS1-205ENST00000498514 TRBV7-9A0A0J9YWB2 115 aa0.59□□□□□ -2.31
SGMS1-205ENST00000498514 C5orf52A6NGY3 159 aa0.59□□□□□ -2.31
SGMS1-205ENST00000498514 C11orf94C9JXX5 98 aa0.59□□□□□ -2.31
SGMS1-205ENST00000498514 E9PLD3 99 aa0.59□□□□□ -2.31
SGMS1-205ENST00000498514 VIMP08670 466 aaKnown RBP0.59□□□□□ -2.31
SGMS1-205ENST00000498514 OR8U8P0C7N1 319 aa0.59□□□□□ -2.31
SGMS1-205ENST00000498514 TPBGLP0DKB5 382 aa0.59□□□□□ -2.31
SGMS1-205ENST00000498514 MUC1P15941 1255 aaPredicted RBP0.59□□□□□ -2.31
SGMS1-205ENST00000498514 HOXA9P31269 272 aa0.59□□□□□ -2.31
SGMS1-205ENST00000498514 AKAP17AQ02040 695 aaKnown RBP0.59□□□□□ -2.31
SGMS1-205ENST00000498514 AIMP1Q12904 312 aaKnown RBP0.59□□□□□ -2.31
SGMS1-205ENST00000498514 KLF5Q13887 457 aaPredicted RBP0.59□□□□□ -2.31
SGMS1-205ENST00000498514 GK2Q14410 553 aaPredicted RBP0.59□□□□□ -2.31
SGMS1-205ENST00000498514 TRADDQ15628 312 aa0.59□□□□□ -2.31
SGMS1-205ENST00000498514 SLC15A2Q16348 729 aa0.59□□□□□ -2.31
SGMS1-205ENST00000498514 DNAJC21Q5F1R6 531 aaKnown RBP0.59□□□□□ -2.31
SGMS1-205ENST00000498514 LY6G6FQ5SQ64 297 aa0.59□□□□□ -2.31
SGMS1-205ENST00000498514 DNLZQ5SXM8 178 aa0.59□□□□□ -2.31
SGMS1-205ENST00000498514 CST9Q5W186 159 aa0.59□□□□□ -2.31
SGMS1-205ENST00000498514 ZNF57Q68EA5 555 aaPredicted RBP0.59□□□□□ -2.31
SGMS1-205ENST00000498514 MZT2BQ6NZ67 158 aa0.59□□□□□ -2.31
SGMS1-205ENST00000498514 ATRAIDQ6UW56 229 aa0.59□□□□□ -2.31
SGMS1-205ENST00000498514 ERN2Q76MJ5 926 aaKnown RBP0.59□□□□□ -2.31
SGMS1-205ENST00000498514 DZIP1Q86YF9 867 aaKnown RBP0.59□□□□□ -2.31
SGMS1-205ENST00000498514 OR52J3Q8NH60 311 aa0.59□□□□□ -2.31
SGMS1-205ENST00000498514 ULK4Q96C45 1275 aa0.59□□□□□ -2.31
SGMS1-205ENST00000498514 LSG1Q9H089 658 aaKnown RBP0.59□□□□□ -2.31
SGMS1-205ENST00000498514 ELOVL2Q9NXB9 296 aa0.59□□□□□ -2.31
SGMS1-205ENST00000498514 TRPC4Q9UBN4 977 aa0.59□□□□□ -2.31
SGMS1-205ENST00000498514 TEKT2Q9UIF3 430 aa0.59□□□□□ -2.31
SGMS1-205ENST00000498514 PSORS1C1Q9UIG5 152 aa0.59□□□□□ -2.31
SGMS1-205ENST00000498514 YTHDF2Q9Y5A9 579 aaKnown RBP0.59□□□□□ -2.31
SGMS1-205ENST00000498514 N4BP2Q86UW6 1770 aaPredicted RBP0.59□□□□□ -2.32
SGMS1-205ENST00000498514 KIDINS220Q9ULH0 1771 aa0.59□□□□□ -2.32
SGMS1-205ENST00000498514 MYO3AQ8NEV4 1616 aa0.59□□□□□ -2.32
SGMS1-205ENST00000498514 PXDNLA1KZ92 1463 aa0.59□□□□□ -2.32
SGMS1-205ENST00000498514 ATP10AO60312 1499 aa0.59□□□□□ -2.32
SGMS1-205ENST00000498514 CFTRP13569 1480 aa0.59□□□□□ -2.32
SGMS1-205ENST00000498514 ZCCHC6Q5VYS8 1495 aaKnown RBP0.59□□□□□ -2.32
SGMS1-205ENST00000498514 SHANK1Q9Y566 2161 aa0.59□□□□□ -2.32
SGMS1-205ENST00000498514 CROCC2H7BZ55 1655 aa0.59□□□□□ -2.32
SGMS1-205ENST00000498514 DNAH11Q96DT5 4516 aa0.59□□□□□ -2.32
SGMS1-205ENST00000498514 COL6A6A6NMZ7 2263 aa0.58□□□□□ -2.32
SGMS1-205ENST00000498514 ADGRB1O14514 1584 aa0.58□□□□□ -2.32
SGMS1-205ENST00000498514 ARPC4-TTLL3A0A0A6YYG9 625 aa0.58□□□□□ -2.32
SGMS1-205ENST00000498514 GFYI3L273 518 aa0.58□□□□□ -2.32
SGMS1-205ENST00000498514 J3QKU1 62 aa0.58□□□□□ -2.32
SGMS1-205ENST00000498514 CTDSPLO15194 276 aa0.58□□□□□ -2.32
SGMS1-205ENST00000498514 EFNA2O43921 213 aa0.58□□□□□ -2.32
SGMS1-205ENST00000498514 CABYRO75952 493 aa0.58□□□□□ -2.32
SGMS1-205ENST00000498514 SIX3O95343 332 aaPredicted RBP0.58□□□□□ -2.32
SGMS1-205ENST00000498514 GGPS1O95749 300 aa0.58□□□□□ -2.32
SGMS1-205ENST00000498514 STARD3NLO95772 234 aa0.58□□□□□ -2.32
SGMS1-205ENST00000498514 PCCBP05166 539 aa0.58□□□□□ -2.32
SGMS1-205ENST00000498514 PLEKP08567 350 aaPredicted RBP0.58□□□□□ -2.32
SGMS1-205ENST00000498514 CT45A8P0DMV1 189 aa0.58□□□□□ -2.32
SGMS1-205ENST00000498514 CT45A9P0DMV2 189 aa0.58□□□□□ -2.32
SGMS1-205ENST00000498514 VDAC1P21796 283 aa0.58□□□□□ -2.32
SGMS1-205ENST00000498514 UQCRC2P22695 453 aa0.58□□□□□ -2.32
SGMS1-205ENST00000498514 PRDX3P30048 256 aaKnown RBP0.58□□□□□ -2.32
SGMS1-205ENST00000498514 NTSP30990 170 aa0.58□□□□□ -2.32
SGMS1-205ENST00000498514 OTX2P32243 289 aa0.58□□□□□ -2.32
SGMS1-205ENST00000498514 HPDP32754 393 aaPredicted RBP0.58□□□□□ -2.32
SGMS1-205ENST00000498514 MTTPP55157 894 aa0.58□□□□□ -2.32
SGMS1-205ENST00000498514 RPS4XP62701 263 aaKnown RBP0.58□□□□□ -2.32
SGMS1-205ENST00000498514 KCNJ11Q14654 390 aa0.58□□□□□ -2.32
SGMS1-205ENST00000498514 ACKR1Q16570 336 aa0.58□□□□□ -2.32
SGMS1-205ENST00000498514 AANATQ16613 207 aa0.58□□□□□ -2.32
SGMS1-205ENST00000498514 CCDC57Q2TAC2 916 aa0.58□□□□□ -2.32
SGMS1-205ENST00000498514 KRTAP21-3Q3LHN1 58 aa0.58□□□□□ -2.32
SGMS1-205ENST00000498514 CT45A2Q5DJT8 189 aa0.58□□□□□ -2.32
SGMS1-205ENST00000498514 SPIN3Q5JUX0 258 aa0.58□□□□□ -2.32
SGMS1-205ENST00000498514 PRR5LQ6MZQ0 368 aa0.58□□□□□ -2.32
SGMS1-205ENST00000498514 TSEN54Q7Z6J9 526 aaKnown RBP0.58□□□□□ -2.32
SGMS1-205ENST00000498514 TMEM252Q8N6L7 170 aa0.58□□□□□ -2.32
SGMS1-205ENST00000498514 OR52P1PQ8NH57 321 aa0.58□□□□□ -2.32
SGMS1-205ENST00000498514 RDH11Q8TC12 318 aa0.58□□□□□ -2.32
SGMS1-205ENST00000498514 DNAJA4Q8WW22 397 aaPredicted RBP0.58□□□□□ -2.32
SGMS1-205ENST00000498514 TMEM158Q8WZ71 300 aa0.58□□□□□ -2.32
SGMS1-205ENST00000498514 SKA1Q96BD8 255 aa0.58□□□□□ -2.32
SGMS1-205ENST00000498514 C11orf24Q96F05 449 aaPredicted RBP0.58□□□□□ -2.32
SGMS1-205ENST00000498514 KLF6Q99612 283 aaPredicted RBP0.58□□□□□ -2.32
SGMS1-205ENST00000498514 FAM129AQ9BZQ8 928 aa0.58□□□□□ -2.32
SGMS1-205ENST00000498514 ZNF350Q9GZX5 532 aa0.58□□□□□ -2.32
SGMS1-205ENST00000498514 MRTO4Q9UKD2 239 aaKnown RBP0.58□□□□□ -2.32
SGMS1-205ENST00000498514 NBASA2RRP1 2371 aa0.58□□□□□ -2.32
SGMS1-205ENST00000498514 WDR7Q9Y4E6 1490 aa0.58□□□□□ -2.32
SGMS1-205ENST00000498514 MUC17Q685J3 4493 aa0.58□□□□□ -2.32
SGMS1-205ENST00000498514 COL27A1Q8IZC6 1860 aaPredicted RBP0.58□□□□□ -2.32
SGMS1-205ENST00000498514 KIF7Q2M1P5 1343 aa0.58□□□□□ -2.32
SGMS1-205ENST00000498514 MAP3K15Q6ZN16 1313 aa0.58□□□□□ -2.32
SGMS1-205ENST00000498514 PRDM15P57071 1507 aaPredicted RBP0.58□□□□□ -2.32
SGMS1-205ENST00000498514 TULP4Q9NRJ4 1543 aa0.58□□□□□ -2.32
SGMS1-205ENST00000498514 PKD1L3Q7Z443 1732 aa0.58□□□□□ -2.32
SGMS1-205ENST00000498514 LRP4O75096 1905 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms