RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 CRATP43155 626 aa11.56□□□□□ -0.56
HSPG2-213ENST00000498495 ATP4BP51164 291 aa11.56□□□□□ -0.56
HSPG2-213ENST00000498495 SUCLG1P53597 346 aaKnown RBP11.56□□□□□ -0.56
HSPG2-213ENST00000498495 RPS3AP61247 264 aaKnown RBP11.56□□□□□ -0.56
HSPG2-213ENST00000498495 CHRNEQ04844 493 aa11.56□□□□□ -0.56
HSPG2-213ENST00000498495 SQLEQ14534 574 aa11.56□□□□□ -0.56
HSPG2-213ENST00000498495 SYPL1Q16563 259 aa11.56□□□□□ -0.56
HSPG2-213ENST00000498495 SGCBQ16585 318 aa11.56□□□□□ -0.56
HSPG2-213ENST00000498495 AGKQ53H12 422 aa11.56□□□□□ -0.56
HSPG2-213ENST00000498495 SLC2A7Q6PXP3 512 aa11.56□□□□□ -0.56
HSPG2-213ENST00000498495 BLOC1S3Q6QNY0 202 aa11.56□□□□□ -0.56
HSPG2-213ENST00000498495 P4HA3Q7Z4N8 544 aa11.56□□□□□ -0.56
HSPG2-213ENST00000498495 ZNF619Q8N2I2 560 aa11.56□□□□□ -0.56
HSPG2-213ENST00000498495 MBD3L2Q8NHZ7 208 aaPredicted RBP11.56□□□□□ -0.56
HSPG2-213ENST00000498495 STON2Q8WXE9 905 aa11.56□□□□□ -0.56
HSPG2-213ENST00000498495 SMPDL3BQ92485 455 aa11.56□□□□□ -0.56
HSPG2-213ENST00000498495 GTF2H4Q92759 462 aa11.56□□□□□ -0.56
HSPG2-213ENST00000498495 WNT2BQ93097 391 aa11.56□□□□□ -0.56
HSPG2-213ENST00000498495 MARVELD3Q96A59 401 aa11.56□□□□□ -0.56
HSPG2-213ENST00000498495 SPDL1Q96EA4 605 aa11.56□□□□□ -0.56
HSPG2-213ENST00000498495 UCN2Q96RP3 112 aa11.56□□□□□ -0.56
HSPG2-213ENST00000498495 TM9SF2Q99805 663 aa11.56□□□□□ -0.56
HSPG2-213ENST00000498495 SAP130Q9H0E3 1048 aa11.56□□□□□ -0.56
HSPG2-213ENST00000498495 PCNX3Q9H6A9 2034 aa11.56□□□□□ -0.56
HSPG2-213ENST00000498495 SLC6A13Q9NSD5 602 aa11.56□□□□□ -0.56
HSPG2-213ENST00000498495 ZNF629Q9UEG4 869 aaPredicted RBP11.56□□□□□ -0.56
HSPG2-213ENST00000498495 KCNE5Q9UJ90 142 aa11.56□□□□□ -0.56
HSPG2-213ENST00000498495 ICAM5Q9UMF0 924 aa11.56□□□□□ -0.56
HSPG2-213ENST00000498495 PRAMEF27A3QJZ7 478 aa11.55□□□□□ -0.56
HSPG2-213ENST00000498495 NR5A2O00482 541 aa11.55□□□□□ -0.56
HSPG2-213ENST00000498495 OIP5O43482 229 aa11.55□□□□□ -0.56
HSPG2-213ENST00000498495 TNFRSF21O75509 655 aa11.55□□□□□ -0.56
HSPG2-213ENST00000498495 RCBTB2O95199 551 aa11.55□□□□□ -0.56
HSPG2-213ENST00000498495 H6PDO95479 791 aa11.55□□□□□ -0.56
HSPG2-213ENST00000498495 CSTAP01040 98 aa11.55□□□□□ -0.56
HSPG2-213ENST00000498495 VIMP08670 466 aaKnown RBP11.55□□□□□ -0.56
HSPG2-213ENST00000498495 TROVE2P10155 538 aaKnown RBP eCLIP11.55□□□□□ -0.56
HSPG2-213ENST00000498495 NR2F1P10589 423 aa11.55□□□□□ -0.56
HSPG2-213ENST00000498495 UBL4AP11441 157 aa11.55□□□□□ -0.56
HSPG2-213ENST00000498495 ZNF17P17021 662 aa11.55□□□□□ -0.56
HSPG2-213ENST00000498495 BMP5P22003 454 aa11.55□□□□□ -0.56
HSPG2-213ENST00000498495 CTSSP25774 331 aa11.55□□□□□ -0.56
HSPG2-213ENST00000498495 EIF1P41567 113 aaKnown RBP11.55□□□□□ -0.56
HSPG2-213ENST00000498495 MAGEA8P43361 318 aa11.55□□□□□ -0.56
HSPG2-213ENST00000498495 SUMO3P55854 103 aaPredicted RBP11.55□□□□□ -0.56
HSPG2-213ENST00000498495 CBFBQ13951 182 aa11.55□□□□□ -0.56
HSPG2-213ENST00000498495 TMEM44Q2T9K0 475 aa11.55□□□□□ -0.56
HSPG2-213ENST00000498495 PLPPR5Q32ZL2 321 aa11.55□□□□□ -0.56
HSPG2-213ENST00000498495 NDUFAF6Q330K2 333 aa11.55□□□□□ -0.56
HSPG2-213ENST00000498495 SLC25A35Q3KQZ1 300 aa11.55□□□□□ -0.56
HSPG2-213ENST00000498495 GTDC1Q4AE62 458 aa11.55□□□□□ -0.56
HSPG2-213ENST00000498495 COX20Q5RI15 118 aa11.55□□□□□ -0.56
HSPG2-213ENST00000498495 AP1ARQ63HQ0 302 aa11.55□□□□□ -0.56
HSPG2-213ENST00000498495 FRRS1Q6ZNA5 592 aa11.55□□□□□ -0.56
HSPG2-213ENST00000498495 LRRC74BQ6ZQY2 392 aa11.55□□□□□ -0.56
HSPG2-213ENST00000498495 EIF3MQ7L2H7 374 aaKnown RBP11.55□□□□□ -0.56
HSPG2-213ENST00000498495 ADGRE4PQ86SQ3 457 aa11.55□□□□□ -0.56
HSPG2-213ENST00000498495 GRAMD2AQ8IUY3 354 aa11.55□□□□□ -0.56
HSPG2-213ENST00000498495 GTPBP8Q8N3Z3 284 aaPredicted RBP11.55□□□□□ -0.56
HSPG2-213ENST00000498495 TMCO5AQ8N6Q1 288 aa11.55□□□□□ -0.56
HSPG2-213ENST00000498495 ANKFN1Q8N957 763 aa11.55□□□□□ -0.56
HSPG2-213ENST00000498495 C9orf106Q8NAJ2 232 aa11.55□□□□□ -0.56
HSPG2-213ENST00000498495 NAXEQ8NCW5 288 aa11.55□□□□□ -0.56
HSPG2-213ENST00000498495 TOR1AIP2Q8NFQ8 470 aa11.55□□□□□ -0.56
HSPG2-213ENST00000498495 OR5W2Q8NH69 310 aa11.55□□□□□ -0.56
HSPG2-213ENST00000498495 GPR119Q8TDV5 335 aa11.55□□□□□ -0.56
HSPG2-213ENST00000498495 OIT3Q8WWZ8 545 aa11.55□□□□□ -0.56
HSPG2-213ENST00000498495 ZG16BQ96DA0 208 aa11.55□□□□□ -0.56
HSPG2-213ENST00000498495 TRNT1Q96Q11 434 aaKnown RBP11.55□□□□□ -0.56
HSPG2-213ENST00000498495 LAT2Q9GZY6 243 aa11.55□□□□□ -0.56
HSPG2-213ENST00000498495 MTHFD2LQ9H903 347 aaPredicted RBP11.55□□□□□ -0.56
HSPG2-213ENST00000498495 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.55□□□□□ -0.56
HSPG2-213ENST00000498495 PCDHB14Q9Y5E9 798 aa11.55□□□□□ -0.56
HSPG2-213ENST00000498495 PCNX1Q96RV3 2341 aa11.55□□□□□ -0.56
HSPG2-213ENST00000498495 LRRK2Q5S007 2527 aa11.55□□□□□ -0.56
HSPG2-213ENST00000498495 ASH1LQ9NR48 2969 aaKnown RBP11.54□□□□□ -0.56
HSPG2-213ENST00000498495 A0A096LPI6 279 aa11.54□□□□□ -0.56
HSPG2-213ENST00000498495 C7orf72A4D263 438 aa11.54□□□□□ -0.56
HSPG2-213ENST00000498495 TMEM247A6NEH6 219 aa11.54□□□□□ -0.56
HSPG2-213ENST00000498495 H0YC42 278 aa11.54□□□□□ -0.56
HSPG2-213ENST00000498495 CLIC1O00299 241 aa11.54□□□□□ -0.56
HSPG2-213ENST00000498495 KIAA0513O60268 411 aa11.54□□□□□ -0.56
HSPG2-213ENST00000498495 LINGO3P0C6S8 592 aa11.54□□□□□ -0.56
HSPG2-213ENST00000498495 TMIGD3P0DMS9 266 aaPredicted RBP11.54□□□□□ -0.56
HSPG2-213ENST00000498495 ADH6P28332 368 aa11.54□□□□□ -0.56
HSPG2-213ENST00000498495 OPRM1P35372 400 aa11.54□□□□□ -0.56
HSPG2-213ENST00000498495 CCR4P51679 360 aa11.54□□□□□ -0.56
HSPG2-213ENST00000498495 AGFG1P52594 562 aaKnown RBP11.54□□□□□ -0.56
HSPG2-213ENST00000498495 ZNF136P52737 540 aa11.54□□□□□ -0.56
HSPG2-213ENST00000498495 TPD52P55327 224 aaPredicted RBP11.54□□□□□ -0.56
HSPG2-213ENST00000498495 CLDN15P56746 228 aa11.54□□□□□ -0.56
HSPG2-213ENST00000498495 CLDN20P56880 219 aa11.54□□□□□ -0.56
HSPG2-213ENST00000498495 RAC1P63000 192 aa11.54□□□□□ -0.56
HSPG2-213ENST00000498495 KCNJ10P78508 379 aa11.54□□□□□ -0.56
HSPG2-213ENST00000498495 GUCY1A3Q02108 690 aa11.54□□□□□ -0.56
HSPG2-213ENST00000498495 FUT5Q11128 374 aa11.54□□□□□ -0.56
HSPG2-213ENST00000498495 FGFBP1Q14512 234 aa11.54□□□□□ -0.56
HSPG2-213ENST00000498495 MAPK14Q16539 360 aa11.54□□□□□ -0.56
HSPG2-213ENST00000498495 METTL21CQ5VZV1 264 aa11.54□□□□□ -0.56
HSPG2-213ENST00000498495 PLXDC2Q6UX71 529 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms