RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 ASCL1P50553 236 aa13.87□□□□□ -0.19
NUP50-219ENST00000497960 ZNF136P52737 540 aa13.87□□□□□ -0.19
NUP50-219ENST00000497960 CLDN18P56856 261 aa13.87□□□□□ -0.19
NUP50-219ENST00000497960 EEFSECP57772 596 aaKnown RBP13.87□□□□□ -0.19
NUP50-219ENST00000497960 B3GALT5-AS1P59052 145 aa13.87□□□□□ -0.19
NUP50-219ENST00000497960 MYBPHQ13203 477 aa13.87□□□□□ -0.19
NUP50-219ENST00000497960 GLYR1Q49A26 553 aaPredicted RBP13.87□□□□□ -0.19
NUP50-219ENST00000497960 EXOSC6Q5RKV6 272 aaKnown RBP13.87□□□□□ -0.19
NUP50-219ENST00000497960 CDC73Q6P1J9 531 aa13.87□□□□□ -0.19
NUP50-219ENST00000497960 APOOLQ6UXV4 268 aa13.87□□□□□ -0.19
NUP50-219ENST00000497960 PIGWQ7Z7B1 504 aa13.87□□□□□ -0.19
NUP50-219ENST00000497960 MEIOBQ8N635 442 aa13.87□□□□□ -0.19
NUP50-219ENST00000497960 C9orf106Q8NAJ2 232 aa13.87□□□□□ -0.19
NUP50-219ENST00000497960 RELL2Q8NC24 303 aaPredicted RBP13.87□□□□□ -0.19
NUP50-219ENST00000497960 OR4C3Q8NH37 302 aa13.87□□□□□ -0.19
NUP50-219ENST00000497960 ADAMTS15Q8TE58 950 aa13.87□□□□□ -0.19
NUP50-219ENST00000497960 CDS1Q92903 461 aa13.87□□□□□ -0.19
NUP50-219ENST00000497960 WNT2BQ93097 391 aa13.87□□□□□ -0.19
NUP50-219ENST00000497960 ZFP3Q96NJ6 502 aa13.87□□□□□ -0.19
NUP50-219ENST00000497960 ZNF559Q9BR84 538 aa13.87□□□□□ -0.19
NUP50-219ENST00000497960 PIGQQ9BRB3 760 aa13.87□□□□□ -0.19
NUP50-219ENST00000497960 SLC35A5Q9BS91 424 aa13.87□□□□□ -0.19
NUP50-219ENST00000497960 MCCC2Q9HCC0 563 aa13.87□□□□□ -0.19
NUP50-219ENST00000497960 UBQLN4Q9NRR5 601 aa13.87□□□□□ -0.19
NUP50-219ENST00000497960 LEF1Q9UJU2 399 aaPredicted RBP13.87□□□□□ -0.19
NUP50-219ENST00000497960 ANKHD1Q8IWZ3 2542 aaKnown RBP13.86□□□□□ -0.19
NUP50-219ENST00000497960 A0A1W2PP18 115 aa13.86□□□□□ -0.19
NUP50-219ENST00000497960 SYT5O00445 386 aa13.86□□□□□ -0.19
NUP50-219ENST00000497960 SCDO00767 359 aa13.86□□□□□ -0.19
NUP50-219ENST00000497960 GMFGO60234 142 aa13.86□□□□□ -0.19
NUP50-219ENST00000497960 GSNP06396 782 aa13.86□□□□□ -0.19
NUP50-219ENST00000497960 ADSLP30566 484 aaPredicted RBP13.86□□□□□ -0.19
NUP50-219ENST00000497960 CCNJQ5T5M9 372 aa13.86□□□□□ -0.19
NUP50-219ENST00000497960 ARSKQ6UWY0 536 aa13.86□□□□□ -0.19
NUP50-219ENST00000497960 ZNF621Q6ZSS3 439 aa13.86□□□□□ -0.19
NUP50-219ENST00000497960 SNX32Q86XE0 403 aa13.86□□□□□ -0.19
NUP50-219ENST00000497960 GRAMD2AQ8IUY3 354 aa13.86□□□□□ -0.19
NUP50-219ENST00000497960 MISPQ8IVT2 679 aa13.86□□□□□ -0.19
NUP50-219ENST00000497960 CLEC4FQ8N1N0 589 aa13.86□□□□□ -0.19
NUP50-219ENST00000497960 CCDC197Q8NCU1 140 aa13.86□□□□□ -0.19
NUP50-219ENST00000497960 BCAS4Q8TDM0 211 aa13.86□□□□□ -0.19
NUP50-219ENST00000497960 RNASE6Q93091 150 aaKnown RBP13.86□□□□□ -0.19
NUP50-219ENST00000497960 DOCK7Q96N67 2140 aa13.86□□□□□ -0.19
NUP50-219ENST00000497960 UCN2Q96RP3 112 aa13.86□□□□□ -0.19
NUP50-219ENST00000497960 FOXD3Q9UJU5 478 aaPredicted RBP13.86□□□□□ -0.19
NUP50-219ENST00000497960 NDUFAF1Q9Y375 327 aa13.86□□□□□ -0.19
NUP50-219ENST00000497960 APCP25054 2843 aa13.86□□□□□ -0.19
NUP50-219ENST00000497960 SPG11Q96JI7 2443 aa13.85□□□□□ -0.19
NUP50-219ENST00000497960 OR2M5A3KFT3 312 aa13.85□□□□□ -0.19
NUP50-219ENST00000497960 RCBTB2O95199 551 aa13.85□□□□□ -0.19
NUP50-219ENST00000497960 CD1EP15812 388 aa13.85□□□□□ -0.19
NUP50-219ENST00000497960 AGFG1P52594 562 aaKnown RBP13.85□□□□□ -0.19
NUP50-219ENST00000497960 DLX5P56178 289 aa13.85□□□□□ -0.19
NUP50-219ENST00000497960 EEF1A1P68104 462 aaKnown RBP13.85□□□□□ -0.19
NUP50-219ENST00000497960 FBXL19-AS1Q494R0 122 aa13.85□□□□□ -0.19
NUP50-219ENST00000497960 MMEL1Q495T6 779 aa13.85□□□□□ -0.19
NUP50-219ENST00000497960 GTDC1Q4AE62 458 aa13.85□□□□□ -0.19
NUP50-219ENST00000497960 EEF1A1P5Q5VTE0 462 aa13.85□□□□□ -0.19
NUP50-219ENST00000497960 P4HA3Q7Z4N8 544 aa13.85□□□□□ -0.19
NUP50-219ENST00000497960 ZAR1Q86SH2 424 aa13.85□□□□□ -0.19
NUP50-219ENST00000497960 ADGRE4PQ86SQ3 457 aa13.85□□□□□ -0.19
NUP50-219ENST00000497960 DHDDSQ86SQ9 333 aa13.85□□□□□ -0.19
NUP50-219ENST00000497960 UBQLNLQ8IYU4 475 aa13.85□□□□□ -0.19
NUP50-219ENST00000497960 ANKS4BQ8N8V4 417 aa13.85□□□□□ -0.19
NUP50-219ENST00000497960 GATSQ8NAP1 163 aa13.85□□□□□ -0.19
NUP50-219ENST00000497960 TSPEARQ8WU66 669 aa13.85□□□□□ -0.19
NUP50-219ENST00000497960 GTF2H4Q92759 462 aa13.85□□□□□ -0.19
NUP50-219ENST00000497960 INTS12Q96CB8 462 aaKnown RBP13.85□□□□□ -0.19
NUP50-219ENST00000497960 SFXN3Q9BWM7 321 aa13.85□□□□□ -0.19
NUP50-219ENST00000497960 HOXD1Q9GZZ0 328 aa13.85□□□□□ -0.19
NUP50-219ENST00000497960 GPATCH2Q9NW75 528 aa13.85□□□□□ -0.19
NUP50-219ENST00000497960 FBXO34Q9NWN3 711 aa13.85□□□□□ -0.19
NUP50-219ENST00000497960 CLCF1Q9UBD9 225 aa13.85□□□□□ -0.19
NUP50-219ENST00000497960 STOML1Q9UBI4 398 aa13.85□□□□□ -0.19
NUP50-219ENST00000497960 ZNF337Q9Y3M9 751 aa13.85□□□□□ -0.19
NUP50-219ENST00000497960 L3MBTL1Q9Y468 752 aa13.85□□□□□ -0.19
NUP50-219ENST00000497960 CCDC168Q8NDH2 2452 aa13.84□□□□□ -0.19
NUP50-219ENST00000497960 A0A087WZY1 265 aa13.84□□□□□ -0.19
NUP50-219ENST00000497960 A0A096LPI6 279 aa13.84□□□□□ -0.19
NUP50-219ENST00000497960 A0A1W2PQD3 144 aa13.84□□□□□ -0.19
NUP50-219ENST00000497960 BBIP1A8MTZ0 92 aa13.84□□□□□ -0.19
NUP50-219ENST00000497960 EEF1E1-BLOC1S5C9J1V9 151 aa13.84□□□□□ -0.19
NUP50-219ENST00000497960 H3BML4 177 aa13.84□□□□□ -0.19
NUP50-219ENST00000497960 SEC14L5O43304 696 aa13.84□□□□□ -0.19
NUP50-219ENST00000497960 EEF1E1O43324 174 aaKnown RBP13.84□□□□□ -0.19
NUP50-219ENST00000497960 KIR2DL3P43628 341 aa13.84□□□□□ -0.19
NUP50-219ENST00000497960 KHKP50053 298 aa13.84□□□□□ -0.19
NUP50-219ENST00000497960 RPS26P62854 115 aaKnown RBP13.84□□□□□ -0.19
NUP50-219ENST00000497960 NFYCQ13952 458 aa13.84□□□□□ -0.19
NUP50-219ENST00000497960 CYLC2Q14093 348 aaPredicted RBP13.84□□□□□ -0.19
NUP50-219ENST00000497960 PAGE3Q5JUK9 113 aa13.84□□□□□ -0.19
NUP50-219ENST00000497960 DCST2Q5T1A1 773 aa13.84□□□□□ -0.19
NUP50-219ENST00000497960 SAXO2Q658L1 398 aa13.84□□□□□ -0.19
NUP50-219ENST00000497960 REP15Q6BDI9 236 aa13.84□□□□□ -0.19
NUP50-219ENST00000497960 POMZP3Q6PJE2 187 aa13.84□□□□□ -0.19
NUP50-219ENST00000497960 C6orf120Q7Z4R8 191 aa13.84□□□□□ -0.19
NUP50-219ENST00000497960 POU5F2Q8N7G0 328 aa13.84□□□□□ -0.19
NUP50-219ENST00000497960 ZNF527Q8NB42 609 aa13.84□□□□□ -0.19
NUP50-219ENST00000497960 OR5M1Q8NGP8 315 aa13.84□□□□□ -0.19
NUP50-219ENST00000497960 PNPT1Q8TCS8 783 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms