RNA–Protein interactions for RNA: ENST00000497871.1

ATPAF2-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-209ENST00000497871 FIS1Q9Y3D6 152 aa16.28■□□□□ 0.2
ATPAF2-209ENST00000497871 CSPG4Q6UVK1 2322 aa16.27■□□□□ 0.2
ATPAF2-209ENST00000497871 CNOT4O95628 575 aaKnown RBP16.27■□□□□ 0.2
ATPAF2-209ENST00000497871 HMGN2P05204 90 aaKnown RBP16.27■□□□□ 0.2
ATPAF2-209ENST00000497871 BCKDHAP12694 445 aa16.27■□□□□ 0.2
ATPAF2-209ENST00000497871 ADH6P28332 368 aa16.27■□□□□ 0.2
ATPAF2-209ENST00000497871 AGTR1P30556 359 aa16.27■□□□□ 0.2
ATPAF2-209ENST00000497871 CD226Q15762 336 aa16.27■□□□□ 0.2
ATPAF2-209ENST00000497871 CCNJQ5T5M9 372 aa16.27■□□□□ 0.2
ATPAF2-209ENST00000497871 WFDC8Q8IUA0 241 aa16.27■□□□□ 0.2
ATPAF2-209ENST00000497871 STEAP2Q8NFT2 490 aa16.27■□□□□ 0.2
ATPAF2-209ENST00000497871 UBLCP1Q8WVY7 318 aaPredicted RBP16.27■□□□□ 0.2
ATPAF2-209ENST00000497871 ROBO4Q8WZ75 1007 aa16.27■□□□□ 0.2
ATPAF2-209ENST00000497871 JADE3Q92613 823 aa16.27■□□□□ 0.2
ATPAF2-209ENST00000497871 PLPPR2Q96GM1 343 aa16.27■□□□□ 0.2
ATPAF2-209ENST00000497871 REXO5Q96IC2 774 aaKnown RBP16.27■□□□□ 0.2
ATPAF2-209ENST00000497871 KLHDC3Q9BQ90 382 aa16.27■□□□□ 0.2
ATPAF2-209ENST00000497871 HOXD1Q9GZZ0 328 aa16.27■□□□□ 0.2
ATPAF2-209ENST00000497871 PIGUQ9H490 435 aa16.27■□□□□ 0.2
ATPAF2-209ENST00000497871 ZCCHC3Q9NUD5 404 aaKnown RBP16.27■□□□□ 0.2
ATPAF2-209ENST00000497871 ATP6V1HQ9UI12 483 aa16.27■□□□□ 0.2
ATPAF2-209ENST00000497871 DSCAMO60469 2012 aa16.27■□□□□ 0.2
ATPAF2-209ENST00000497871 TMEM114B3SHH9 223 aa16.26■□□□□ 0.19
ATPAF2-209ENST00000497871 SOX30O94993 753 aa16.26■□□□□ 0.19
ATPAF2-209ENST00000497871 PLAUP00749 431 aa16.26■□□□□ 0.19
ATPAF2-209ENST00000497871 NID1P14543 1247 aa16.26■□□□□ 0.19
ATPAF2-209ENST00000497871 ELK4P28324 431 aa16.26■□□□□ 0.19
ATPAF2-209ENST00000497871 RPL3P39023 403 aaKnown RBP16.26■□□□□ 0.19
ATPAF2-209ENST00000497871 PCLAFQ15004 111 aa16.26■□□□□ 0.19
ATPAF2-209ENST00000497871 RNPS1Q15287 305 aaKnown RBP16.26■□□□□ 0.19
ATPAF2-209ENST00000497871 UGT3A2Q3SY77 523 aa16.26■□□□□ 0.19
ATPAF2-209ENST00000497871 GALNTL6Q49A17 601 aa16.26■□□□□ 0.19
ATPAF2-209ENST00000497871 TMEM201Q5SNT2 666 aa16.26■□□□□ 0.19
ATPAF2-209ENST00000497871 GSPT2Q8IYD1 628 aaKnown RBP16.26■□□□□ 0.19
ATPAF2-209ENST00000497871 C4orf33Q8N1A6 199 aa16.26■□□□□ 0.19
ATPAF2-209ENST00000497871 OTUB1Q96FW1 271 aaPredicted RBP16.26■□□□□ 0.19
ATPAF2-209ENST00000497871 C12orf49Q9H741 205 aa16.26■□□□□ 0.19
ATPAF2-209ENST00000497871 SIRT3Q9NTG7 399 aaPredicted RBP16.26■□□□□ 0.19
ATPAF2-209ENST00000497871 TRAF6Q9Y4K3 522 aa16.26■□□□□ 0.19
ATPAF2-209ENST00000497871 HIVEP2P31629 2446 aa16.26■□□□□ 0.19
ATPAF2-209ENST00000497871 SMIM23A6NLE4 172 aa16.25■□□□□ 0.19
ATPAF2-209ENST00000497871 GJE1A6NN92 205 aa16.25■□□□□ 0.19
ATPAF2-209ENST00000497871 ZNF195O14628 629 aa16.25■□□□□ 0.19
ATPAF2-209ENST00000497871 HS3ST1O14792 307 aa16.25■□□□□ 0.19
ATPAF2-209ENST00000497871 EFNA2O43921 213 aa16.25■□□□□ 0.19
ATPAF2-209ENST00000497871 EFNA1P20827 205 aaPredicted RBP16.25■□□□□ 0.19
ATPAF2-209ENST00000497871 ATP6V1C1P21283 382 aa16.25■□□□□ 0.19
ATPAF2-209ENST00000497871 PCSK6P29122 969 aa16.25■□□□□ 0.19
ATPAF2-209ENST00000497871 HPCAL1P37235 193 aa16.25■□□□□ 0.19
ATPAF2-209ENST00000497871 ZNF117Q03924 483 aa16.25■□□□□ 0.19
ATPAF2-209ENST00000497871 LASP1Q14847 261 aaKnown RBP16.25■□□□□ 0.19
ATPAF2-209ENST00000497871 ZNF239Q16600 458 aaKnown RBP16.25■□□□□ 0.19
ATPAF2-209ENST00000497871 KLHL26Q53HC5 615 aa16.25■□□□□ 0.19
ATPAF2-209ENST00000497871 CDC73Q6P1J9 531 aa16.25■□□□□ 0.19
ATPAF2-209ENST00000497871 DDIASQ8IXT1 998 aa16.25■□□□□ 0.19
ATPAF2-209ENST00000497871 NATD1Q8N6N6 113 aa16.25■□□□□ 0.19
ATPAF2-209ENST00000497871 PHOSPHO1Q8TCT1 267 aa16.25■□□□□ 0.19
ATPAF2-209ENST00000497871 RNF128Q8TEB7 428 aa16.25■□□□□ 0.19
ATPAF2-209ENST00000497871 TWIST2Q8WVJ9 160 aa16.25■□□□□ 0.19
ATPAF2-209ENST00000497871 CDS1Q92903 461 aa16.25■□□□□ 0.19
ATPAF2-209ENST00000497871 CPNE4Q96A23 557 aaPredicted RBP16.25■□□□□ 0.19
ATPAF2-209ENST00000497871 CHMP6Q96FZ7 201 aa16.25■□□□□ 0.19
ATPAF2-209ENST00000497871 EML4Q9HC35 981 aaKnown RBP16.25■□□□□ 0.19
ATPAF2-209ENST00000497871 GP6Q9HCN6 339 aa16.25■□□□□ 0.19
ATPAF2-209ENST00000497871 SNX8Q9Y5X2 465 aa16.25■□□□□ 0.19
ATPAF2-209ENST00000497871 ACTL7BQ9Y614 415 aa16.25■□□□□ 0.19
ATPAF2-209ENST00000497871 GPC6Q9Y625 555 aaPredicted RBP16.25■□□□□ 0.19
ATPAF2-209ENST00000497871 TLN2Q9Y4G6 2542 aa16.25■□□□□ 0.19
ATPAF2-209ENST00000497871 H3BNH8 94 aa16.24■□□□□ 0.19
ATPAF2-209ENST00000497871 SCAMP2O15127 329 aaKnown RBP16.24■□□□□ 0.19
ATPAF2-209ENST00000497871 NPHS1O60500 1241 aa16.24■□□□□ 0.19
ATPAF2-209ENST00000497871 PRKD3O94806 890 aa16.24■□□□□ 0.19
ATPAF2-209ENST00000497871 LAMP1P11279 417 aa16.24■□□□□ 0.19
ATPAF2-209ENST00000497871 MAPK1P28482 360 aa16.24■□□□□ 0.19
ATPAF2-209ENST00000497871 SFTPDP35247 375 aa16.24■□□□□ 0.19
ATPAF2-209ENST00000497871 CCT3P49368 545 aaKnown RBP16.24■□□□□ 0.19
ATPAF2-209ENST00000497871 P2RX1P51575 399 aa16.24■□□□□ 0.19
ATPAF2-209ENST00000497871 FOXF1Q12946 379 aa16.24■□□□□ 0.19
ATPAF2-209ENST00000497871 ARL13AQ5H913 290 aaPredicted RBP16.24■□□□□ 0.19
ATPAF2-209ENST00000497871 ADAM5Q6NVV9 412 aa16.24■□□□□ 0.19
ATPAF2-209ENST00000497871 CBLN3Q6UW01 205 aa16.24■□□□□ 0.19
ATPAF2-209ENST00000497871 PRIMA1Q86XR5 153 aa16.24■□□□□ 0.19
ATPAF2-209ENST00000497871 GABRG1Q8N1C3 465 aa16.24■□□□□ 0.19
ATPAF2-209ENST00000497871 ZNF527Q8NB42 609 aa16.24■□□□□ 0.19
ATPAF2-209ENST00000497871 OR7A2PQ8NGA2 310 aa16.24■□□□□ 0.19
ATPAF2-209ENST00000497871 FBXO27Q8NI29 283 aa16.24■□□□□ 0.19
ATPAF2-209ENST00000497871 PSMA8Q8TAA3 256 aa16.24■□□□□ 0.19
ATPAF2-209ENST00000497871 ADAMTS15Q8TE58 950 aa16.24■□□□□ 0.19
ATPAF2-209ENST00000497871 EPS8L3Q8TE67 593 aaKnown RBP16.24■□□□□ 0.19
ATPAF2-209ENST00000497871 ABHD3Q8WU67 409 aa16.24■□□□□ 0.19
ATPAF2-209ENST00000497871 OR5P2Q8WZ92 322 aa16.24■□□□□ 0.19
ATPAF2-209ENST00000497871 AKAP1Q92667 903 aaKnown RBP eCLIP16.24■□□□□ 0.19
ATPAF2-209ENST00000497871 S100PBPQ96BU1 408 aa16.24■□□□□ 0.19
ATPAF2-209ENST00000497871 PPP3R2Q96LZ3 170 aa16.24■□□□□ 0.19
ATPAF2-209ENST00000497871 TACO1Q9BSH4 297 aaKnown RBP16.24■□□□□ 0.19
ATPAF2-209ENST00000497871 ACTRT3Q9BYD9 372 aa16.24■□□□□ 0.19
ATPAF2-209ENST00000497871 KLHL13Q9P2N7 655 aa16.24■□□□□ 0.19
ATPAF2-209ENST00000497871 ICAM5Q9UMF0 924 aa16.24■□□□□ 0.19
ATPAF2-209ENST00000497871 USF3Q68DE3 2245 aa16.23■□□□□ 0.19
ATPAF2-209ENST00000497871 RAI1Q7Z5J4 1906 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms