RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 PATL1Q86TB9 770 aaKnown RBP10.84□□□□□ -0.67
CUX1-210ENST00000497815 SLC22A16Q86VW1 577 aa10.84□□□□□ -0.67
CUX1-210ENST00000497815 MISPQ8IVT2 679 aa10.84□□□□□ -0.67
CUX1-210ENST00000497815 TNIP2Q8NFZ5 429 aa10.84□□□□□ -0.67
CUX1-210ENST00000497815 B4GALNT2Q8NHY0 566 aa10.84□□□□□ -0.67
CUX1-210ENST00000497815 SLC26A7Q8TE54 656 aa10.84□□□□□ -0.67
CUX1-210ENST00000497815 CNOT9Q92600 299 aaKnown RBP10.84□□□□□ -0.67
CUX1-210ENST00000497815 PMM1Q92871 262 aa10.84□□□□□ -0.67
CUX1-210ENST00000497815 TAMM41Q96BW9 452 aa10.84□□□□□ -0.67
CUX1-210ENST00000497815 SNRNP40Q96DI7 357 aaKnown RBP10.84□□□□□ -0.67
CUX1-210ENST00000497815 CLPTM1LQ96KA5 538 aa10.84□□□□□ -0.67
CUX1-210ENST00000497815 KLHDC3Q9BQ90 382 aa10.84□□□□□ -0.67
CUX1-210ENST00000497815 BTBD10Q9BSF8 475 aa10.84□□□□□ -0.67
CUX1-210ENST00000497815 THTPAQ9BU02 230 aa10.84□□□□□ -0.67
CUX1-210ENST00000497815 DEFB127Q9H1M4 99 aa10.84□□□□□ -0.67
CUX1-210ENST00000497815 ZNF703Q9H7S9 590 aaPredicted RBP10.84□□□□□ -0.67
CUX1-210ENST00000497815 ASF1BQ9NVP2 202 aa10.84□□□□□ -0.67
CUX1-210ENST00000497815 DKKL1Q9UK85 242 aa10.84□□□□□ -0.67
CUX1-210ENST00000497815 NPIPA1Q9UND3 350 aa10.84□□□□□ -0.67
CUX1-210ENST00000497815 SLC35A3Q9Y2D2 325 aa10.84□□□□□ -0.67
CUX1-210ENST00000497815 IFT52Q9Y366 437 aa10.84□□□□□ -0.67
CUX1-210ENST00000497815 KMT2BQ9UMN6 2715 aaPredicted RBP10.84□□□□□ -0.67
CUX1-210ENST00000497815 CACNA1GO43497 2377 aa10.83□□□□□ -0.68
CUX1-210ENST00000497815 FRS3O43559 492 aa10.83□□□□□ -0.68
CUX1-210ENST00000497815 GMNNO75496 209 aa10.83□□□□□ -0.68
CUX1-210ENST00000497815 CBR3O75828 277 aa10.83□□□□□ -0.68
CUX1-210ENST00000497815 WISP2O76076 250 aa10.83□□□□□ -0.68
CUX1-210ENST00000497815 MFN2O95140 757 aa10.83□□□□□ -0.68
CUX1-210ENST00000497815 THBS1P07996 1170 aa10.83□□□□□ -0.68
CUX1-210ENST00000497815 HSD17B1P14061 328 aa10.83□□□□□ -0.68
CUX1-210ENST00000497815 MST1P26927 711 aa10.83□□□□□ -0.68
CUX1-210ENST00000497815 KDELR2P33947 212 aa10.83□□□□□ -0.68
CUX1-210ENST00000497815 RYKP34925 604 aa10.83□□□□□ -0.68
CUX1-210ENST00000497815 PGM1P36871 562 aa10.83□□□□□ -0.68
CUX1-210ENST00000497815 RASSF2P50749 326 aa10.83□□□□□ -0.68
CUX1-210ENST00000497815 EEF1A1P68104 462 aaKnown RBP10.83□□□□□ -0.68
CUX1-210ENST00000497815 PLAURQ03405 335 aa10.83□□□□□ -0.68
CUX1-210ENST00000497815 GABPB1Q06547 395 aaPredicted RBP10.83□□□□□ -0.68
CUX1-210ENST00000497815 SKP2Q13309 424 aa10.83□□□□□ -0.68
CUX1-210ENST00000497815 GLIPR1L2Q4G1C9 344 aa10.83□□□□□ -0.68
CUX1-210ENST00000497815 CCDC80Q76M96 950 aa10.83□□□□□ -0.68
CUX1-210ENST00000497815 CLIP4Q8N3C7 705 aa10.83□□□□□ -0.68
CUX1-210ENST00000497815 FADS6Q8N9I5 356 aa10.83□□□□□ -0.68
CUX1-210ENST00000497815 OIT3Q8WWZ8 545 aa10.83□□□□□ -0.68
CUX1-210ENST00000497815 FAM162AQ96A26 154 aa10.83□□□□□ -0.68
CUX1-210ENST00000497815 CCDC124Q96CT7 223 aaKnown RBP10.83□□□□□ -0.68
CUX1-210ENST00000497815 PCDHAC1Q9H158 963 aa10.83□□□□□ -0.68
CUX1-210ENST00000497815 PTGES2Q9H7Z7 377 aa10.83□□□□□ -0.68
CUX1-210ENST00000497815 OLAHQ9NV23 265 aa10.83□□□□□ -0.68
CUX1-210ENST00000497815 DNAJB12Q9NXW2 375 aaKnown RBP10.83□□□□□ -0.68
CUX1-210ENST00000497815 CD300AQ9UGN4 299 aa10.83□□□□□ -0.68
CUX1-210ENST00000497815 SLC13A4Q9UKG4 626 aa10.83□□□□□ -0.68
CUX1-210ENST00000497815 PRPF19Q9UMS4 504 aaKnown RBP10.83□□□□□ -0.68
CUX1-210ENST00000497815 VDAC3Q9Y277 283 aa10.83□□□□□ -0.68
CUX1-210ENST00000497815 PIEZO2Q9H5I5 2752 aa10.82□□□□□ -0.68
CUX1-210ENST00000497815 IGLV3-32A0A0A0MS00 114 aa10.82□□□□□ -0.68
CUX1-210ENST00000497815 CDHR4A6H8M9 788 aa10.82□□□□□ -0.68
CUX1-210ENST00000497815 EIF4E2O60573 245 aaKnown RBP10.82□□□□□ -0.68
CUX1-210ENST00000497815 DNAJC8O75937 253 aaPredicted RBP10.82□□□□□ -0.68
CUX1-210ENST00000497815 ZNF682O95780 498 aa10.82□□□□□ -0.68
CUX1-210ENST00000497815 GKN3PP0CG01 181 aa10.82□□□□□ -0.68
CUX1-210ENST00000497815 GGT1P19440 569 aa10.82□□□□□ -0.68
CUX1-210ENST00000497815 ENDOUP21128 410 aaKnown RBP10.82□□□□□ -0.68
CUX1-210ENST00000497815 DPP4P27487 766 aa10.82□□□□□ -0.68
CUX1-210ENST00000497815 MSX1P28360 303 aa10.82□□□□□ -0.68
CUX1-210ENST00000497815 HTR1EP28566 365 aa10.82□□□□□ -0.68
CUX1-210ENST00000497815 PRKAR1BP31321 381 aa10.82□□□□□ -0.68
CUX1-210ENST00000497815 ADH7P40394 386 aa10.82□□□□□ -0.68
CUX1-210ENST00000497815 P2RX1P51575 399 aa10.82□□□□□ -0.68
CUX1-210ENST00000497815 ZNF41P51814 821 aaPredicted RBP10.82□□□□□ -0.68
CUX1-210ENST00000497815 CRYBA2P53672 197 aa10.82□□□□□ -0.68
CUX1-210ENST00000497815 NCALDP61601 193 aa10.82□□□□□ -0.68
CUX1-210ENST00000497815 SLC10A1Q14973 349 aa10.82□□□□□ -0.68
CUX1-210ENST00000497815 HYAL4Q2M3T9 481 aa10.82□□□□□ -0.68
CUX1-210ENST00000497815 CYBRD1Q53TN4 286 aa10.82□□□□□ -0.68
CUX1-210ENST00000497815 CMPK2Q5EBM0 449 aa10.82□□□□□ -0.68
CUX1-210ENST00000497815 WIPI1Q5MNZ9 446 aaPredicted RBP10.82□□□□□ -0.68
CUX1-210ENST00000497815 RNF220Q5VTB9 566 aa10.82□□□□□ -0.68
CUX1-210ENST00000497815 GLYATQ6IB77 296 aa10.82□□□□□ -0.68
CUX1-210ENST00000497815 ARSKQ6UWY0 536 aa10.82□□□□□ -0.68
CUX1-210ENST00000497815 PRICKLE2Q7Z3G6 844 aa10.82□□□□□ -0.68
CUX1-210ENST00000497815 YRDCQ86U90 279 aaKnown RBP10.82□□□□□ -0.68
CUX1-210ENST00000497815 COMTD1Q86VU5 262 aa10.82□□□□□ -0.68
CUX1-210ENST00000497815 CMIPQ8IY22 773 aa10.82□□□□□ -0.68
CUX1-210ENST00000497815 ZNF843Q8N446 348 aa10.82□□□□□ -0.68
CUX1-210ENST00000497815 FAM109AQ8N4B1 249 aa10.82□□□□□ -0.68
CUX1-210ENST00000497815 TOR1AIP2Q8NFQ8 470 aa10.82□□□□□ -0.68
CUX1-210ENST00000497815 OR10Q1Q8NGQ4 319 aa10.82□□□□□ -0.68
CUX1-210ENST00000497815 OR14L1PQ8NHC6 308 aa10.82□□□□□ -0.68
CUX1-210ENST00000497815 CPT1CQ8TCG5 803 aa10.82□□□□□ -0.68
CUX1-210ENST00000497815 FAR1Q8WVX9 515 aa10.82□□□□□ -0.68
CUX1-210ENST00000497815 TPD52L3Q96J77 140 aa10.82□□□□□ -0.68
CUX1-210ENST00000497815 PINK1Q9BXM7 581 aa10.82□□□□□ -0.68
CUX1-210ENST00000497815 RSPO3Q9BXY4 272 aaPredicted RBP10.82□□□□□ -0.68
CUX1-210ENST00000497815 LAT2Q9GZY6 243 aa10.82□□□□□ -0.68
CUX1-210ENST00000497815 SLC6A15Q9H2J7 730 aa10.82□□□□□ -0.68
CUX1-210ENST00000497815 ARMC7Q9H6L4 198 aa10.82□□□□□ -0.68
CUX1-210ENST00000497815 EXO5Q9H790 373 aa10.82□□□□□ -0.68
CUX1-210ENST00000497815 AGPAT4Q9NRZ5 378 aa10.82□□□□□ -0.68
CUX1-210ENST00000497815 TAS2R10Q9NYW0 307 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms