RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 C8BP07358 591 aa7.92□□□□□ -1.14
U2AF1-212ENST00000496462 APOBEC1P41238 236 aaKnown RBP7.92□□□□□ -1.14
U2AF1-212ENST00000496462 TRAM2Q15035 370 aa7.92□□□□□ -1.14
U2AF1-212ENST00000496462 GLYR1Q49A26 553 aaPredicted RBP7.92□□□□□ -1.14
U2AF1-212ENST00000496462 RABL3Q5HYI8 236 aa7.92□□□□□ -1.14
U2AF1-212ENST00000496462 ADAMTS17Q8TE56 1095 aa7.92□□□□□ -1.14
U2AF1-212ENST00000496462 CTHRC1Q96CG8 243 aa7.92□□□□□ -1.14
U2AF1-212ENST00000496462 C11orf24Q96F05 449 aaPredicted RBP7.92□□□□□ -1.14
U2AF1-212ENST00000496462 TREX2Q9BQ50 279 aaPredicted RBP7.92□□□□□ -1.14
U2AF1-212ENST00000496462 AICDAQ9GZX7 198 aa7.92□□□□□ -1.14
U2AF1-212ENST00000496462 MED31Q9Y3C7 131 aa7.92□□□□□ -1.14
U2AF1-212ENST00000496462 TLN1Q9Y490 2541 aaKnown RBP7.92□□□□□ -1.14
U2AF1-212ENST00000496462 A0A1W2PNU3 283 aaPredicted RBP7.92□□□□□ -1.14
U2AF1-212ENST00000496462 FKBP6O75344 327 aa7.92□□□□□ -1.14
U2AF1-212ENST00000496462 TBX6O95947 436 aaPredicted RBP7.92□□□□□ -1.14
U2AF1-212ENST00000496462 ACTL6AO96019 429 aa7.92□□□□□ -1.14
U2AF1-212ENST00000496462 GUSBP08236 651 aa7.92□□□□□ -1.14
U2AF1-212ENST00000496462 CCNA2P20248 432 aa7.92□□□□□ -1.14
U2AF1-212ENST00000496462 PTGS2P35354 604 aa7.92□□□□□ -1.14
U2AF1-212ENST00000496462 POLR2HP52434 150 aaKnown RBP7.92□□□□□ -1.14
U2AF1-212ENST00000496462 CHRNEQ04844 493 aa7.92□□□□□ -1.14
U2AF1-212ENST00000496462 DUSP8Q13202 625 aa7.92□□□□□ -1.14
U2AF1-212ENST00000496462 GK3PQ14409 553 aa7.92□□□□□ -1.14
U2AF1-212ENST00000496462 GTDC1Q4AE62 458 aa7.92□□□□□ -1.14
U2AF1-212ENST00000496462 DCST1Q5T197 706 aa7.92□□□□□ -1.14
U2AF1-212ENST00000496462 GRAMD2AQ8IUY3 354 aa7.92□□□□□ -1.14
U2AF1-212ENST00000496462 SLC15A3Q8IY34 581 aa7.92□□□□□ -1.14
U2AF1-212ENST00000496462 APCDD1LQ8NCL9 501 aa7.92□□□□□ -1.14
U2AF1-212ENST00000496462 OR10G3Q8NGC4 313 aa7.92□□□□□ -1.14
U2AF1-212ENST00000496462 MRGPRX4Q96LA9 322 aa7.92□□□□□ -1.14
U2AF1-212ENST00000496462 FAM53CQ9NYF3 392 aa7.92□□□□□ -1.14
U2AF1-212ENST00000496462 NTMQ9P121 344 aa7.92□□□□□ -1.14
U2AF1-212ENST00000496462 ACTR3BQ9P1U1 418 aa7.92□□□□□ -1.14
U2AF1-212ENST00000496462 EGFL7Q9UHF1 273 aa7.92□□□□□ -1.14
U2AF1-212ENST00000496462 CARD8Q9Y2G2 431 aa7.92□□□□□ -1.14
U2AF1-212ENST00000496462 TRAPPC13A5PLN9 417 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 G3V3Y1 287 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 ICOSLGO75144 302 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 CNOT3O75175 753 aaKnown RBP7.91□□□□□ -1.14
U2AF1-212ENST00000496462 KRT36O76013 467 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 OXSR1O95747 527 aaPredicted RBP7.91□□□□□ -1.14
U2AF1-212ENST00000496462 HSD17B1P14061 328 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 NID1P14543 1247 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 DNASE1L1P49184 302 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 CLK1P49759 484 aaKnown RBP7.91□□□□□ -1.14
U2AF1-212ENST00000496462 SPIBQ01892 262 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 SYPL1Q16563 259 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 DHRS4L2Q6PKH6 230 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.91□□□□□ -1.14
U2AF1-212ENST00000496462 FUNDC1Q8IVP5 155 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 CISD2Q8N5K1 135 aaKnown RBP7.91□□□□□ -1.14
U2AF1-212ENST00000496462 OR2M7Q8NG81 312 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 PAQR8Q8TEZ7 354 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 MYCBPQ99417 103 aaPredicted RBP7.91□□□□□ -1.14
U2AF1-212ENST00000496462 GPATCH1Q9BRR8 931 aaKnown RBP7.91□□□□□ -1.14
U2AF1-212ENST00000496462 MCCC2Q9HCC0 563 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.91□□□□□ -1.14
U2AF1-212ENST00000496462 DHRS12A0PJE2 317 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 SEC14L5O43304 696 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 NME2P1O60361 137 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 EIF1BO60739 113 aaKnown RBP7.91□□□□□ -1.14
U2AF1-212ENST00000496462 DNAJB5O75953 348 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 SPTBP11277 2137 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 NME2P22392 152 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 TNFSF10P50591 281 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 UGT2B15P54855 530 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 OR2B6P58173 313 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 BNIP1Q12981 228 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 SELENBP1Q13228 472 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 SPINK14Q6IE38 97 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 OR2A2Q6IF42 318 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 ULK3Q6PHR2 472 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 CYP2R1Q6VVX0 501 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 GRINAQ7Z429 371 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 WDR53Q7Z5U6 358 aaPredicted RBP7.91□□□□□ -1.14
U2AF1-212ENST00000496462 YTHDF3Q7Z739 585 aaKnown RBP7.91□□□□□ -1.14
U2AF1-212ENST00000496462 GALNT10Q86SR1 603 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 MARCH3Q86UD3 253 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 PTRH1Q86Y79 214 aaKnown RBP7.91□□□□□ -1.14
U2AF1-212ENST00000496462 ARHGEF39Q8N4T4 335 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 SLC38A5Q8WUX1 472 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 ZNF350Q9GZX5 532 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 DEFB127Q9H1M4 99 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 H2AFY2Q9P0M6 372 aaPredicted RBP7.91□□□□□ -1.14
U2AF1-212ENST00000496462 ZNF639Q9UID6 485 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 VDAC3Q9Y277 283 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 EMC9Q9Y3B6 208 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 PTPRBP23467 1997 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 MGAQ8IWI9 3026 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 TRGV8A0A0C4DH27 118 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 ANKUB1A6NFN9 424 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 ZNF726A6NNF4 738 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 HCN1O60741 890 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 UGT2B11O75310 529 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 WNT3P56703 355 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 KLHL26Q53HC5 615 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 TMEM201Q5SNT2 666 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 KLHL24Q6TFL4 600 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 IGFL3Q6UXB1 125 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 ZNF605Q86T29 641 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms