RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 TNFSF10P50591 281 aa4.03□□□□□ -1.76
SF3B1-212ENST00000496458 ATP5IP56385 69 aaPredicted RBP4.03□□□□□ -1.76
SF3B1-212ENST00000496458 RWDD2BP57060 319 aa4.03□□□□□ -1.76
SF3B1-212ENST00000496458 KCNK10P57789 538 aa4.03□□□□□ -1.76
SF3B1-212ENST00000496458 ACTR3P61158 418 aa4.03□□□□□ -1.76
SF3B1-212ENST00000496458 ARHGAP19Q14CB8 494 aa4.03□□□□□ -1.76
SF3B1-212ENST00000496458 CLEC2AQ6UVW9 174 aa4.03□□□□□ -1.76
SF3B1-212ENST00000496458 B3GLCTQ6Y288 498 aa4.03□□□□□ -1.76
SF3B1-212ENST00000496458 BNIPLQ7Z465 357 aa4.03□□□□□ -1.76
SF3B1-212ENST00000496458 PSTKQ8IV42 348 aaKnown RBP4.03□□□□□ -1.76
SF3B1-212ENST00000496458 KRT222Q8N1A0 295 aa4.03□□□□□ -1.76
SF3B1-212ENST00000496458 MINDY2Q8NBR6 621 aa4.03□□□□□ -1.76
SF3B1-212ENST00000496458 VN1R17PQ8TDU5 208 aa4.03□□□□□ -1.76
SF3B1-212ENST00000496458 DQX1Q8TE96 717 aaKnown RBP4.03□□□□□ -1.76
SF3B1-212ENST00000496458 PHYHIPLQ96FC7 376 aa4.03□□□□□ -1.76
SF3B1-212ENST00000496458 RPGRIP1Q96KN7 1286 aa4.03□□□□□ -1.76
SF3B1-212ENST00000496458 GUCD1Q96NT3 240 aa4.03□□□□□ -1.76
SF3B1-212ENST00000496458 BCL7BQ9BQE9 202 aa4.03□□□□□ -1.76
SF3B1-212ENST00000496458 FICDQ9BVA6 458 aa4.03□□□□□ -1.76
SF3B1-212ENST00000496458 TBC1D10AQ9BXI6 508 aa4.03□□□□□ -1.76
SF3B1-212ENST00000496458 VCX2Q9H322 139 aa4.03□□□□□ -1.76
SF3B1-212ENST00000496458 VCPKMTQ9H867 229 aa4.03□□□□□ -1.76
SF3B1-212ENST00000496458 CLEC4EQ9ULY5 219 aa4.03□□□□□ -1.76
SF3B1-212ENST00000496458 PLA2G4CQ9UP65 541 aa4.03□□□□□ -1.76
SF3B1-212ENST00000496458 MGAT4BQ9UQ53 548 aa4.03□□□□□ -1.76
SF3B1-212ENST00000496458 NKTRP30414 1462 aaKnown RBP4.03□□□□□ -1.76
SF3B1-212ENST00000496458 IQSEC2Q5JU85 1478 aa4.03□□□□□ -1.76
SF3B1-212ENST00000496458 PIK3C2GO75747 1445 aa4.03□□□□□ -1.76
SF3B1-212ENST00000496458 TONSLQ96HA7 1378 aa4.02□□□□□ -1.77
SF3B1-212ENST00000496458 NWD1Q149M9 1564 aa4.02□□□□□ -1.77
SF3B1-212ENST00000496458 SETD1AO15047 1707 aaKnown RBP4.02□□□□□ -1.77
SF3B1-212ENST00000496458 CCT8L1PA6NM43 557 aa4.02□□□□□ -1.77
SF3B1-212ENST00000496458 ZNF716A6NP11 495 aa4.02□□□□□ -1.77
SF3B1-212ENST00000496458 XPO1O14980 1071 aaKnown RBP4.02□□□□□ -1.77
SF3B1-212ENST00000496458 CTAG2O75638 210 aa4.02□□□□□ -1.77
SF3B1-212ENST00000496458 TOM1L1O75674 476 aa4.02□□□□□ -1.77
SF3B1-212ENST00000496458 GAS8O95995 478 aa4.02□□□□□ -1.77
SF3B1-212ENST00000496458 S100A9P06702 114 aaKnown RBP4.02□□□□□ -1.77
SF3B1-212ENST00000496458 TPM1P09493 284 aa4.02□□□□□ -1.77
SF3B1-212ENST00000496458 IQCF3P0C7M6 154 aa4.02□□□□□ -1.77
SF3B1-212ENST00000496458 ZNF735P0CB33 412 aa4.02□□□□□ -1.77
SF3B1-212ENST00000496458 MAGEA9P43362 315 aa4.02□□□□□ -1.77
SF3B1-212ENST00000496458 MEOX2P50222 304 aa4.02□□□□□ -1.77
SF3B1-212ENST00000496458 SLC25A1P53007 311 aa4.02□□□□□ -1.77
SF3B1-212ENST00000496458 MFAP2P55001 183 aa4.02□□□□□ -1.77
SF3B1-212ENST00000496458 HAND2P61296 217 aa4.02□□□□□ -1.77
SF3B1-212ENST00000496458 CXCL6P80162 114 aa4.02□□□□□ -1.77
SF3B1-212ENST00000496458 HSPA14Q0VDF9 509 aa4.02□□□□□ -1.77
SF3B1-212ENST00000496458 RCN1Q15293 331 aa4.02□□□□□ -1.77
SF3B1-212ENST00000496458 PDK4Q16654 411 aa4.02□□□□□ -1.77
SF3B1-212ENST00000496458 TMEM41BQ5BJD5 291 aa4.02□□□□□ -1.77
SF3B1-212ENST00000496458 ACER2Q5QJU3 275 aa4.02□□□□□ -1.77
SF3B1-212ENST00000496458 FAM219BQ5XKK7 198 aa4.02□□□□□ -1.77
SF3B1-212ENST00000496458 TMEM126BQ8IUX1 230 aa4.02□□□□□ -1.77
SF3B1-212ENST00000496458 RELL2Q8NC24 303 aaPredicted RBP4.02□□□□□ -1.77
SF3B1-212ENST00000496458 BHLHE23Q8NDY6 225 aa4.02□□□□□ -1.77
SF3B1-212ENST00000496458 AKR7LQ8NHP1 331 aa4.02□□□□□ -1.77
SF3B1-212ENST00000496458 FBXO25Q8TCJ0 367 aa4.02□□□□□ -1.77
SF3B1-212ENST00000496458 C11orf24Q96F05 449 aaPredicted RBP4.02□□□□□ -1.77
SF3B1-212ENST00000496458 DDX50Q9BQ39 737 aaKnown RBP4.02□□□□□ -1.77
SF3B1-212ENST00000496458 ST6GALNAC5Q9BVH7 336 aa4.02□□□□□ -1.77
SF3B1-212ENST00000496458 CAPS2Q9BXY5 557 aa4.02□□□□□ -1.77
SF3B1-212ENST00000496458 RNF41Q9H4P4 317 aaPredicted RBP4.02□□□□□ -1.77
SF3B1-212ENST00000496458 PDFQ9HBH1 243 aa4.02□□□□□ -1.77
SF3B1-212ENST00000496458 ZCCHC3Q9NUD5 404 aaKnown RBP4.02□□□□□ -1.77
SF3B1-212ENST00000496458 PIGVQ9NUD9 493 aa4.02□□□□□ -1.77
SF3B1-212ENST00000496458 CHMP5Q9NZZ3 219 aa4.02□□□□□ -1.77
SF3B1-212ENST00000496458 IL17CQ9P0M4 197 aa4.02□□□□□ -1.77
SF3B1-212ENST00000496458 MYOM2P54296 1465 aa4.02□□□□□ -1.77
SF3B1-212ENST00000496458 NRXN1Q9ULB1 1477 aa4.02□□□□□ -1.77
SF3B1-212ENST00000496458 YTHDC2Q9H6S0 1430 aaKnown RBP4.02□□□□□ -1.77
SF3B1-212ENST00000496458 VIRMAQ69YN4 1812 aaKnown RBP4.02□□□□□ -1.77
SF3B1-212ENST00000496458 LRPPRCP42704 1394 aaKnown RBP4.02□□□□□ -1.77
SF3B1-212ENST00000496458 ABCC11Q96J66 1382 aa4.02□□□□□ -1.77
SF3B1-212ENST00000496458 PLEKHH1Q9ULM0 1364 aa4.02□□□□□ -1.77
SF3B1-212ENST00000496458 XRN1Q8IZH2 1706 aaKnown RBP4.01□□□□□ -1.77
SF3B1-212ENST00000496458 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.01□□□□□ -1.77
SF3B1-212ENST00000496458 A0A0U1RQS6 177 aa4.01□□□□□ -1.77
SF3B1-212ENST00000496458 SERTM2A0A1B0GWG4 89 aa4.01□□□□□ -1.77
SF3B1-212ENST00000496458 TMEM129A0AVI4 362 aa4.01□□□□□ -1.77
SF3B1-212ENST00000496458 GOLGA8OA6NCC3 632 aa4.01□□□□□ -1.77
SF3B1-212ENST00000496458 MEI4A8MW99 385 aa4.01□□□□□ -1.77
SF3B1-212ENST00000496458 E7ENQ6 273 aa4.01□□□□□ -1.77
SF3B1-212ENST00000496458 GOLGA8NF8WBI6 632 aa4.01□□□□□ -1.77
SF3B1-212ENST00000496458 K7EQM0 130 aa4.01□□□□□ -1.77
SF3B1-212ENST00000496458 LGALS8O00214 317 aa4.01□□□□□ -1.77
SF3B1-212ENST00000496458 POLR2DO15514 142 aaKnown RBP4.01□□□□□ -1.77
SF3B1-212ENST00000496458 MED7O43513 233 aa4.01□□□□□ -1.77
SF3B1-212ENST00000496458 ECI2O75521 394 aa4.01□□□□□ -1.77
SF3B1-212ENST00000496458 CIB2O75838 187 aa4.01□□□□□ -1.77
SF3B1-212ENST00000496458 MFN2O95140 757 aa4.01□□□□□ -1.77
SF3B1-212ENST00000496458 STBD1O95210 358 aa4.01□□□□□ -1.77
SF3B1-212ENST00000496458 IL1BP01584 269 aa4.01□□□□□ -1.77
SF3B1-212ENST00000496458 CHRNGP07510 517 aa4.01□□□□□ -1.77
SF3B1-212ENST00000496458 ANXA8P13928 327 aa4.01□□□□□ -1.77
SF3B1-212ENST00000496458 PGAM2P15259 253 aa4.01□□□□□ -1.77
SF3B1-212ENST00000496458 B4GALT1P15291 398 aa4.01□□□□□ -1.77
SF3B1-212ENST00000496458 OR1G1P47890 313 aa4.01□□□□□ -1.77
SF3B1-212ENST00000496458 PAX2Q02962 417 aa4.01□□□□□ -1.77
SF3B1-212ENST00000496458 DOC2AQ14183 400 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms