RNA–Protein interactions for RNA: ENST00000496447.5

PTPRF-215, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 5,887 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-215ENST00000496447 SRPX2O60687 465 aaPredicted RBP12.35□□□□□ -0.43
PTPRF-215ENST00000496447 ICAM2P13598 275 aa12.35□□□□□ -0.43
PTPRF-215ENST00000496447 CHMP24386 653 aa12.35□□□□□ -0.43
PTPRF-215ENST00000496447 ARL3P36405 182 aa12.35□□□□□ -0.43
PTPRF-215ENST00000496447 SELENOWP63302 87 aa12.35□□□□□ -0.43
PTPRF-215ENST00000496447 LRRC37A5PQ49AS3 106 aa12.35□□□□□ -0.43
PTPRF-215ENST00000496447 OR5K2Q8NHB8 316 aa12.35□□□□□ -0.43
PTPRF-215ENST00000496447 KLHL15Q96M94 604 aa12.35□□□□□ -0.43
PTPRF-215ENST00000496447 RTP3Q9BQQ7 232 aa12.35□□□□□ -0.43
PTPRF-215ENST00000496447 HDHD5Q9BXW7 423 aa12.35□□□□□ -0.43
PTPRF-215ENST00000496447 ERVK13-1Q9NX77 482 aa12.35□□□□□ -0.43
PTPRF-215ENST00000496447 KCNN3Q9UGI6 736 aa12.35□□□□□ -0.43
PTPRF-215ENST00000496447 HS3ST2Q9Y278 367 aa12.35□□□□□ -0.43
PTPRF-215ENST00000496447 SLC1A7O00341 560 aa12.35□□□□□ -0.43
PTPRF-215ENST00000496447 YKT6O15498 198 aa12.35□□□□□ -0.43
PTPRF-215ENST00000496447 F11P03951 625 aa12.35□□□□□ -0.43
PTPRF-215ENST00000496447 SLC2A5P22732 501 aa12.35□□□□□ -0.43
PTPRF-215ENST00000496447 PCGF2P35227 344 aa12.35□□□□□ -0.43
PTPRF-215ENST00000496447 IDUAP35475 653 aa12.35□□□□□ -0.43
PTPRF-215ENST00000496447 MICAQ29983 383 aa12.35□□□□□ -0.43
PTPRF-215ENST00000496447 ZNF791Q3KP31 576 aaPredicted RBP12.35□□□□□ -0.43
PTPRF-215ENST00000496447 GAREM2Q75VX8 874 aa12.35□□□□□ -0.43
PTPRF-215ENST00000496447 TDHQ8IZJ6 230 aa12.35□□□□□ -0.43
PTPRF-215ENST00000496447 GDPD1Q8N9F7 314 aa12.35□□□□□ -0.43
PTPRF-215ENST00000496447 C19orf47Q8N9M1 422 aaKnown RBP12.35□□□□□ -0.43
PTPRF-215ENST00000496447 KDM1BQ8NB78 822 aa12.35□□□□□ -0.43
PTPRF-215ENST00000496447 FAM71F1Q96KD3 344 aaPredicted RBP12.35□□□□□ -0.43
PTPRF-215ENST00000496447 ACPTQ9BZG2 426 aa12.35□□□□□ -0.43
PTPRF-215ENST00000496447 ENKD1Q9H0I2 346 aa12.35□□□□□ -0.43
PTPRF-215ENST00000496447 ABRACLQ9P1F3 81 aa12.35□□□□□ -0.43
PTPRF-215ENST00000496447 OPN1LWP04000 364 aa12.35□□□□□ -0.43
PTPRF-215ENST00000496447 CAPN3P20807 821 aa12.35□□□□□ -0.43
PTPRF-215ENST00000496447 CNR2P34972 360 aa12.35□□□□□ -0.43
PTPRF-215ENST00000496447 PTGER1P34995 402 aa12.35□□□□□ -0.43
PTPRF-215ENST00000496447 ART1P52961 327 aa12.35□□□□□ -0.43
PTPRF-215ENST00000496447 AIMP2Q13155 320 aaKnown RBP12.35□□□□□ -0.43
PTPRF-215ENST00000496447 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.35□□□□□ -0.43
PTPRF-215ENST00000496447 IL20RBQ6UXL0 311 aa12.35□□□□□ -0.43
PTPRF-215ENST00000496447 OR51B6Q9H340 312 aa12.35□□□□□ -0.43
PTPRF-215ENST00000496447 GPR83Q9NYM4 423 aa12.35□□□□□ -0.43
PTPRF-215ENST00000496447 MYO9BQ13459 2157 aa12.35□□□□□ -0.43
PTPRF-215ENST00000496447 BORCS7-ASMTA0A0B4J1R7 106 aa12.35□□□□□ -0.43
PTPRF-215ENST00000496447 CDC14CA4D256 554 aa12.35□□□□□ -0.43
PTPRF-215ENST00000496447 CPMP14384 443 aa12.35□□□□□ -0.43
PTPRF-215ENST00000496447 RBM39Q14498 530 aaKnown RBP12.35□□□□□ -0.43
PTPRF-215ENST00000496447 PLGLAQ15195 96 aa12.35□□□□□ -0.43
PTPRF-215ENST00000496447 HSF5Q4G112 596 aaPredicted RBP12.35□□□□□ -0.43
PTPRF-215ENST00000496447 OR5H6Q8NGV6 325 aa12.35□□□□□ -0.43
PTPRF-215ENST00000496447 SLC39A13Q96H72 371 aa12.35□□□□□ -0.43
PTPRF-215ENST00000496447 CHRDQ9H2X0 955 aa12.35□□□□□ -0.43
PTPRF-215ENST00000496447 MEPEQ9NQ76 525 aaPredicted RBP12.35□□□□□ -0.43
PTPRF-215ENST00000496447 SDR39U1Q9NRG7 319 aaPredicted RBP12.35□□□□□ -0.43
PTPRF-215ENST00000496447 FAM86C1Q9NVL1 165 aa12.35□□□□□ -0.43
PTPRF-215ENST00000496447 USP36Q9P275 1121 aaKnown RBP12.35□□□□□ -0.43
PTPRF-215ENST00000496447 DNAJB11Q9UBS4 358 aa12.35□□□□□ -0.43
PTPRF-215ENST00000496447 ANKRD30BLA7E2S9 258 aa12.34□□□□□ -0.43
PTPRF-215ENST00000496447 H0YGG7 62 aa12.34□□□□□ -0.43
PTPRF-215ENST00000496447 MPPED1O15442 326 aa12.34□□□□□ -0.43
PTPRF-215ENST00000496447 ZP2Q05996 745 aa12.34□□□□□ -0.43
PTPRF-215ENST00000496447 CTSL3PQ5NE16 218 aa12.34□□□□□ -0.43
PTPRF-215ENST00000496447 OR51Q1Q8NH59 317 aa12.34□□□□□ -0.43
PTPRF-215ENST00000496447 SFXN5Q8TD22 340 aa12.34□□□□□ -0.43
PTPRF-215ENST00000496447 NPRL2Q8WTW4 380 aa12.34□□□□□ -0.43
PTPRF-215ENST00000496447 ASB11Q8WXH4 323 aa12.34□□□□□ -0.43
PTPRF-215ENST00000496447 OR4K3Q96R72 315 aa12.34□□□□□ -0.43
PTPRF-215ENST00000496447 PCDHB10Q9UN67 800 aa12.34□□□□□ -0.43
PTPRF-215ENST00000496447 IER3IP1Q9Y5U9 82 aa12.34□□□□□ -0.43
PTPRF-215ENST00000496447 SOCS7O14512 581 aa12.34□□□□□ -0.43
PTPRF-215ENST00000496447 PCDH17O14917 1159 aa12.34□□□□□ -0.43
PTPRF-215ENST00000496447 LRRTM2O43300 516 aa12.34□□□□□ -0.43
PTPRF-215ENST00000496447 KIAA0513O60268 411 aa12.34□□□□□ -0.43
PTPRF-215ENST00000496447 IFNA5P01569 189 aa12.34□□□□□ -0.43
PTPRF-215ENST00000496447 NUDT7P0C024 238 aa12.34□□□□□ -0.43
PTPRF-215ENST00000496447 UGT2B7P16662 529 aa12.34□□□□□ -0.43
PTPRF-215ENST00000496447 GLO1Q04760 184 aa12.34□□□□□ -0.43
PTPRF-215ENST00000496447 SHHQ15465 462 aa12.34□□□□□ -0.43
PTPRF-215ENST00000496447 CYB561A3Q8NBI2 242 aa12.34□□□□□ -0.43
PTPRF-215ENST00000496447 PPP1R35Q8TAP8 253 aa12.34□□□□□ -0.43
PTPRF-215ENST00000496447 ZNF597Q96LX8 424 aa12.34□□□□□ -0.43
PTPRF-215ENST00000496447 SLC6A16Q9GZN6 736 aa12.34□□□□□ -0.43
PTPRF-215ENST00000496447 SYT4Q9H2B2 425 aa12.34□□□□□ -0.43
PTPRF-215ENST00000496447 CCDC86Q9H6F5 360 aaKnown RBP12.34□□□□□ -0.43
PTPRF-215ENST00000496447 PLEK2Q9NYT0 353 aa12.34□□□□□ -0.43
PTPRF-215ENST00000496447 NME4O00746 187 aa12.34□□□□□ -0.43
PTPRF-215ENST00000496447 SULT1B1O43704 296 aa12.34□□□□□ -0.43
PTPRF-215ENST00000496447 GPR75O95800 540 aa12.34□□□□□ -0.43
PTPRF-215ENST00000496447 EGFP01133 1207 aa12.34□□□□□ -0.43
PTPRF-215ENST00000496447 EVI2BP34910 448 aa12.34□□□□□ -0.43
PTPRF-215ENST00000496447 AHRP35869 848 aa12.34□□□□□ -0.43
PTPRF-215ENST00000496447 PRDX1Q06830 199 aaKnown RBP12.34□□□□□ -0.43
PTPRF-215ENST00000496447 MFSD9Q8NBP5 474 aa12.34□□□□□ -0.43
PTPRF-215ENST00000496447 ANKK1Q8NFD2 765 aa12.34□□□□□ -0.43
PTPRF-215ENST00000496447 ADAMTSL3P82987 1691 aa12.34□□□□□ -0.43
PTPRF-215ENST00000496447 STMND1H3BQB6 276 aa12.34□□□□□ -0.43
PTPRF-215ENST00000496447 ATG12O94817 140 aa12.34□□□□□ -0.43
PTPRF-215ENST00000496447 FNTBP49356 437 aa12.34□□□□□ -0.43
PTPRF-215ENST00000496447 RRADP55042 308 aa12.34□□□□□ -0.43
PTPRF-215ENST00000496447 DCAF7P61962 342 aa12.34□□□□□ -0.43
PTPRF-215ENST00000496447 PSPHP78330 225 aa12.34□□□□□ -0.43
PTPRF-215ENST00000496447 LANCL3Q6ZV70 420 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms