RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 AGTR1P30556 359 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 GPX4P36969 197 aaPredicted RBP8.48□□□□□ -1.05
HPS4-217ENST00000496385 ACTR1AP61163 376 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 CDK6Q00534 326 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 CPSF6Q16630 551 aaKnown RBP eCLIP8.48□□□□□ -1.05
HPS4-217ENST00000496385 MPPE1Q53F39 396 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 LBHQ53QV2 105 aaPredicted RBP8.48□□□□□ -1.05
HPS4-217ENST00000496385 PLPP4Q5VZY2 271 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 SFXN4Q6P4A7 337 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 CERS6Q6ZMG9 384 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 GPRIN1Q7Z2K8 1008 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 LRRC70Q7Z2Q7 622 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 GLT6D1Q7Z4J2 308 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 MRGPREQ86SM8 312 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 SLC39A11Q8N1S5 342 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 HDDC3Q8N4P3 179 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 TCTEX1D2Q8WW35 142 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 VOPP1Q96AW1 172 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 HMCESQ96FZ2 354 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 APIPQ96GX9 242 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 IGSF21Q96ID5 467 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 APOLD1Q96LR9 279 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 ZNF354BQ96LW1 612 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 KLHL5Q96PQ7 755 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 EDEM2Q9BV94 578 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 ZDHHC5Q9C0B5 715 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 SPG21Q9NZD8 308 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 PTGFRNQ9P2B2 879 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 NFKBIL1Q9UBC1 381 aaPredicted RBP8.48□□□□□ -1.05
HPS4-217ENST00000496385 GULP1Q9UBP9 304 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 KCNE1BA0A087WTH5 132 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 C17orf113A0A1B0GUU1 675 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 TTLL8A6PVC2 850 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 KDM4EB2RXH2 506 aaPredicted RBP8.48□□□□□ -1.05
HPS4-217ENST00000496385 SCAMP2O15127 329 aaKnown RBP8.48□□□□□ -1.05
HPS4-217ENST00000496385 PGRMC2O15173 223 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 OR10H3O60404 316 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 TLR5O60602 858 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 RDH16O75452 317 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 KRT33AO76009 404 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 MT-ND4P03905 459 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 WNT1P04628 370 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 CRATP43155 626 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 LHX1P48742 406 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 MVDP53602 400 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 CXADRP78310 365 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 PDZK1IP1Q13113 114 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 GANABQ14697 944 aaKnown RBP8.48□□□□□ -1.05
HPS4-217ENST00000496385 CPTPQ5TA50 214 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 TMEM88Q6PEY1 159 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 PRSS55Q6UWB4 352 aaPredicted RBP8.48□□□□□ -1.05
HPS4-217ENST00000496385 TRMT10AQ8TBZ6 339 aaKnown RBP8.48□□□□□ -1.05
HPS4-217ENST00000496385 SPPL3Q8TCT6 385 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 RXFP4Q8TDU9 374 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 SMARCD1Q96GM5 515 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 FUZQ9BT04 418 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 ASH2LQ9UBL3 628 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 ZNF629Q9UEG4 869 aaPredicted RBP8.48□□□□□ -1.05
HPS4-217ENST00000496385 AFF4Q9UHB7 1163 aaKnown RBP8.48□□□□□ -1.05
HPS4-217ENST00000496385 RASD1Q9Y272 281 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 TRBV4-1A0A0J9YWV2 114 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 UBE2QL1A1L167 161 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 EIF4E2O60573 245 aaKnown RBP8.47□□□□□ -1.05
HPS4-217ENST00000496385 TMEM127O75204 238 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 SEMA7AO75326 666 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 GUCA1CO95843 209 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 IFNGP01579 166 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 ANXA5P08758 320 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 ANKRD34CP0C6C1 535 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 GSTM3P21266 225 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 DRD5P21918 477 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 ELAVL4P26378 380 aaKnown RBP8.47□□□□□ -1.05
HPS4-217ENST00000496385 CD79BP40259 229 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 PMELP40967 661 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 LILRA4P59901 499 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 AP1S1P61966 158 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 DGCR2P98153 550 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 E2F1Q01094 437 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 PON3Q15166 354 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 TIGD5Q53EQ6 642 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 MANEAQ5SRI9 462 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 ADNP2Q6IQ32 1131 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 PSAPL1Q6NUJ1 521 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 PGBD2Q6P3X8 592 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 CD300LGQ6UXG3 332 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 MISPQ8IVT2 679 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 TMEM86AQ8N2M4 240 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 ZNF561Q8N587 486 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 C15orf54Q8N8G6 183 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 BMPERQ8N8U9 685 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 TEX19Q8NA77 164 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 TMEM185AQ8NFB2 350 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 PHOSPHO1Q8TCT1 267 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 THEM6Q8WUY1 208 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 SORCS1Q8WY21 1168 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 TMEM68Q96MH6 324 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 MS4A4EQ96PG1 132 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 ADGRE3Q9BY15 652 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 SEC11CQ9BY50 192 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 MFRPQ9BY79 579 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms