RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 COPS4Q9BT78 406 aa12.6□□□□□ -0.39
SPTBN1-205ENST00000496323 EVA1AQ9H8M9 152 aa12.6□□□□□ -0.39
SPTBN1-205ENST00000496323 AKIRIN1Q9H9L7 192 aaPredicted RBP12.6□□□□□ -0.39
SPTBN1-205ENST00000496323 LIN28AQ9H9Z2 209 aaKnown RBP12.6□□□□□ -0.39
SPTBN1-205ENST00000496323 CCNB1IP1Q9NPC3 277 aa12.6□□□□□ -0.39
SPTBN1-205ENST00000496323 C20orf141Q9NUB4 165 aa12.6□□□□□ -0.39
SPTBN1-205ENST00000496323 SELENONQ9NZV5 590 aa12.6□□□□□ -0.39
SPTBN1-205ENST00000496323 CFL2Q9Y281 166 aa12.6□□□□□ -0.39
SPTBN1-205ENST00000496323 C2orf92A0A1B0GVN3 265 aa12.59□□□□□ -0.39
SPTBN1-205ENST00000496323 A0A1B0GWA3 101 aa12.59□□□□□ -0.39
SPTBN1-205ENST00000496323 EFCAB7A8K855 629 aa12.59□□□□□ -0.39
SPTBN1-205ENST00000496323 IDSB3KWA1 339 aa12.59□□□□□ -0.39
SPTBN1-205ENST00000496323 MRPS14O60783 128 aaKnown RBP12.59□□□□□ -0.39
SPTBN1-205ENST00000496323 ENTPD6O75354 484 aa12.59□□□□□ -0.39
SPTBN1-205ENST00000496323 FGF5P12034 268 aa12.59□□□□□ -0.39
SPTBN1-205ENST00000496323 ACVR2AP27037 513 aa12.59□□□□□ -0.39
SPTBN1-205ENST00000496323 GRK6P43250 576 aa12.59□□□□□ -0.39
SPTBN1-205ENST00000496323 OCA2Q04671 838 aa12.59□□□□□ -0.39
SPTBN1-205ENST00000496323 DESI1Q6ICB0 168 aa12.59□□□□□ -0.39
SPTBN1-205ENST00000496323 APOOLQ6UXV4 268 aa12.59□□□□□ -0.39
SPTBN1-205ENST00000496323 BMP8AQ7Z5Y6 402 aa12.59□□□□□ -0.39
SPTBN1-205ENST00000496323 CMIPQ8IY22 773 aa12.59□□□□□ -0.39
SPTBN1-205ENST00000496323 LSMEM1Q8N8F7 131 aa12.59□□□□□ -0.39
SPTBN1-205ENST00000496323 GRHL3Q8TE85 626 aa12.59□□□□□ -0.39
SPTBN1-205ENST00000496323 TMEM239Q8WW34 195 aa12.59□□□□□ -0.39
SPTBN1-205ENST00000496323 FGF11Q92914 225 aa12.59□□□□□ -0.39
SPTBN1-205ENST00000496323 SLC35B4Q969S0 331 aa12.59□□□□□ -0.39
SPTBN1-205ENST00000496323 GAL3ST4Q96RP7 486 aa12.59□□□□□ -0.39
SPTBN1-205ENST00000496323 TMEM27Q9HBJ8 222 aa12.59□□□□□ -0.39
SPTBN1-205ENST00000496323 C14orf105Q9NVL8 296 aa12.59□□□□□ -0.39
SPTBN1-205ENST00000496323 TVP23BQ9NYZ1 205 aa12.59□□□□□ -0.39
SPTBN1-205ENST00000496323 COMMD3-BMI1R4GMX3 469 aa12.59□□□□□ -0.39
SPTBN1-205ENST00000496323 LNP1A1A4G5 178 aa12.58□□□□□ -0.39
SPTBN1-205ENST00000496323 CDC14CA4D256 554 aa12.58□□□□□ -0.39
SPTBN1-205ENST00000496323 VSTM2BA6NLU5 285 aa12.58□□□□□ -0.39
SPTBN1-205ENST00000496323 KHNYNO15037 678 aaKnown RBP12.58□□□□□ -0.39
SPTBN1-205ENST00000496323 PRKYO43930 277 aa12.58□□□□□ -0.39
SPTBN1-205ENST00000496323 MAN1A2O60476 641 aa12.58□□□□□ -0.39
SPTBN1-205ENST00000496323 FADS2O95864 444 aaKnown RBP12.58□□□□□ -0.39
SPTBN1-205ENST00000496323 CSTAP01040 98 aa12.58□□□□□ -0.39
SPTBN1-205ENST00000496323 ADRA2AP08913 450 aa12.58□□□□□ -0.39
SPTBN1-205ENST00000496323 ZNF883P0CG24 379 aa12.58□□□□□ -0.39
SPTBN1-205ENST00000496323 CSTF2P33240 577 aaKnown RBP eCLIP12.58□□□□□ -0.39
SPTBN1-205ENST00000496323 CD226Q15762 336 aa12.58□□□□□ -0.39
SPTBN1-205ENST00000496323 PLA2G2CQ5R387 149 aa12.58□□□□□ -0.39
SPTBN1-205ENST00000496323 TMEM201Q5SNT2 666 aa12.58□□□□□ -0.39
SPTBN1-205ENST00000496323 FNDC7Q5VTL7 733 aa12.58□□□□□ -0.39
SPTBN1-205ENST00000496323 CASP12Q6UXS9 341 aa12.58□□□□□ -0.39
SPTBN1-205ENST00000496323 B3GNT6Q6ZMB0 384 aa12.58□□□□□ -0.39
SPTBN1-205ENST00000496323 OVCH1Q7RTY7 1134 aa12.58□□□□□ -0.39
SPTBN1-205ENST00000496323 BCDIN3DQ7Z5W3 292 aaKnown RBP12.58□□□□□ -0.39
SPTBN1-205ENST00000496323 ANKRD37Q7Z713 158 aa12.58□□□□□ -0.39
SPTBN1-205ENST00000496323 MRGPREQ86SM8 312 aa12.58□□□□□ -0.39
SPTBN1-205ENST00000496323 PRR22Q8IZ63 422 aa12.58□□□□□ -0.39
SPTBN1-205ENST00000496323 TCEANCQ8N8B7 351 aa12.58□□□□□ -0.39
SPTBN1-205ENST00000496323 B3GNT7Q8NFL0 401 aa12.58□□□□□ -0.39
SPTBN1-205ENST00000496323 TRUB1Q8WWH5 349 aaKnown RBP12.58□□□□□ -0.39
SPTBN1-205ENST00000496323 LOXL4Q96JB6 756 aa12.58□□□□□ -0.39
SPTBN1-205ENST00000496323 DOK1Q99704 481 aa12.58□□□□□ -0.39
SPTBN1-205ENST00000496323 WWTR1Q9GZV5 400 aa12.58□□□□□ -0.39
SPTBN1-205ENST00000496323 SLC25A19Q9HC21 320 aa12.58□□□□□ -0.39
SPTBN1-205ENST00000496323 ACOT13Q9NPJ3 140 aa12.58□□□□□ -0.39
SPTBN1-205ENST00000496323 WDFY3Q8IZQ1 3526 aa12.58□□□□□ -0.4
SPTBN1-205ENST00000496323 SH3D21A4FU49 640 aa12.58□□□□□ -0.4
SPTBN1-205ENST00000496323 ZNF99A8MXY4 864 aaPredicted RBP12.58□□□□□ -0.4
SPTBN1-205ENST00000496323 ZNF701M0R085 212 aaPredicted RBP12.58□□□□□ -0.4
SPTBN1-205ENST00000496323 LDOC1O95751 146 aaPredicted RBP12.58□□□□□ -0.4
SPTBN1-205ENST00000496323 CDK1P06493 297 aa12.58□□□□□ -0.4
SPTBN1-205ENST00000496323 CCL4P13236 92 aa12.58□□□□□ -0.4
SPTBN1-205ENST00000496323 MAKP20794 623 aa12.58□□□□□ -0.4
SPTBN1-205ENST00000496323 STAT5AP42229 794 aa12.58□□□□□ -0.4
SPTBN1-205ENST00000496323 TRA2AQ13595 282 aaKnown RBP eCLIP12.58□□□□□ -0.4
SPTBN1-205ENST00000496323 TUBA3CQ13748 450 aa12.58□□□□□ -0.4
SPTBN1-205ENST00000496323 IL11RAQ14626 422 aa12.58□□□□□ -0.4
SPTBN1-205ENST00000496323 ZSWIM7Q19AV6 140 aa12.58□□□□□ -0.4
SPTBN1-205ENST00000496323 RNF113BQ8IZP6 322 aaKnown RBP12.58□□□□□ -0.4
SPTBN1-205ENST00000496323 ZNF441Q8N8Z8 693 aa12.58□□□□□ -0.4
SPTBN1-205ENST00000496323 OR8J1Q8NGP2 316 aa12.58□□□□□ -0.4
SPTBN1-205ENST00000496323 RNF217Q8TC41 542 aa12.58□□□□□ -0.4
SPTBN1-205ENST00000496323 ART5Q96L15 291 aa12.58□□□□□ -0.4
SPTBN1-205ENST00000496323 ADOQ96SZ5 270 aa12.58□□□□□ -0.4
SPTBN1-205ENST00000496323 ATP13A2Q9NQ11 1180 aa12.58□□□□□ -0.4
SPTBN1-205ENST00000496323 MEPEQ9NQ76 525 aaPredicted RBP12.58□□□□□ -0.4
SPTBN1-205ENST00000496323 UBQLN4Q9NRR5 601 aa12.58□□□□□ -0.4
SPTBN1-205ENST00000496323 CLN6Q9NWW5 311 aa12.58□□□□□ -0.4
SPTBN1-205ENST00000496323 PTTG2Q9NZH5 202 aa12.58□□□□□ -0.4
SPTBN1-205ENST00000496323 PCDHGB2Q9Y5G2 931 aa12.58□□□□□ -0.4
SPTBN1-205ENST00000496323 PCDHGA5Q9Y5G8 931 aa12.58□□□□□ -0.4
SPTBN1-205ENST00000496323 R4GN57 208 aa12.58□□□□□ -0.4
SPTBN1-205ENST00000496323 KPNA4O00629 521 aaPredicted RBP12.57□□□□□ -0.4
SPTBN1-205ENST00000496323 OIP5O43482 229 aa12.57□□□□□ -0.4
SPTBN1-205ENST00000496323 CHP2O43745 196 aa12.57□□□□□ -0.4
SPTBN1-205ENST00000496323 RFPL3O75679 317 aa12.57□□□□□ -0.4
SPTBN1-205ENST00000496323 UTS2O95399 124 aa12.57□□□□□ -0.4
SPTBN1-205ENST00000496323 HEXBP07686 556 aa12.57□□□□□ -0.4
SPTBN1-205ENST00000496323 STSP08842 583 aa12.57□□□□□ -0.4
SPTBN1-205ENST00000496323 HBQ1P09105 142 aa12.57□□□□□ -0.4
SPTBN1-205ENST00000496323 ZNF28P17035 718 aa12.57□□□□□ -0.4
SPTBN1-205ENST00000496323 FUT1P19526 365 aa12.57□□□□□ -0.4
SPTBN1-205ENST00000496323 ACP1P24666 158 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms