RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 BHLHE40O14503 412 aa10.26□□□□□ -0.77
CMSS1-208ENST00000496116 CHP2O43745 196 aa10.26□□□□□ -0.77
CMSS1-208ENST00000496116 SRPX2O60687 465 aaPredicted RBP10.26□□□□□ -0.77
CMSS1-208ENST00000496116 CBX7O95931 251 aa10.26□□□□□ -0.77
CMSS1-208ENST00000496116 GUSBP08236 651 aa10.26□□□□□ -0.77
CMSS1-208ENST00000496116 ZGLP1P0C6A0 271 aa10.26□□□□□ -0.77
CMSS1-208ENST00000496116 MAKP20794 623 aa10.26□□□□□ -0.77
CMSS1-208ENST00000496116 RFX3P48380 749 aa10.26□□□□□ -0.77
CMSS1-208ENST00000496116 FABP5Q01469 135 aa10.26□□□□□ -0.77
CMSS1-208ENST00000496116 BDH1Q02338 343 aa10.26□□□□□ -0.77
CMSS1-208ENST00000496116 STX4Q12846 297 aa10.26□□□□□ -0.77
CMSS1-208ENST00000496116 DEFB110Q30KQ9 67 aa10.26□□□□□ -0.77
CMSS1-208ENST00000496116 LRIT3Q3SXY7 679 aa10.26□□□□□ -0.77
CMSS1-208ENST00000496116 PLBD1Q6P4A8 553 aa10.26□□□□□ -0.77
CMSS1-208ENST00000496116 WDR88Q6ZMY6 472 aa10.26□□□□□ -0.77
CMSS1-208ENST00000496116 ZNF438Q7Z4V0 828 aa10.26□□□□□ -0.77
CMSS1-208ENST00000496116 LNX2Q8N448 690 aa10.26□□□□□ -0.77
CMSS1-208ENST00000496116 FRMD1Q8N878 549 aa10.26□□□□□ -0.77
CMSS1-208ENST00000496116 ZNF614Q8N883 585 aa10.26□□□□□ -0.77
CMSS1-208ENST00000496116 AVL9Q8NBF6 648 aa10.26□□□□□ -0.77
CMSS1-208ENST00000496116 HOXB13Q92826 284 aaPredicted RBP10.26□□□□□ -0.77
CMSS1-208ENST00000496116 TXNDC15Q96J42 360 aa10.26□□□□□ -0.77
CMSS1-208ENST00000496116 LMF2Q9BU23 707 aaKnown RBP10.26□□□□□ -0.77
CMSS1-208ENST00000496116 CAPN10Q9HC96 672 aa10.26□□□□□ -0.77
CMSS1-208ENST00000496116 FAM60AQ9NP50 221 aa10.26□□□□□ -0.77
CMSS1-208ENST00000496116 ATP13A2Q9NQ11 1180 aa10.26□□□□□ -0.77
CMSS1-208ENST00000496116 C20orf141Q9NUB4 165 aa10.26□□□□□ -0.77
CMSS1-208ENST00000496116 WSB2Q9NYS7 404 aaPredicted RBP10.26□□□□□ -0.77
CMSS1-208ENST00000496116 SPTBN5Q9NRC6 3674 aaKnown RBP10.25□□□□□ -0.77
CMSS1-208ENST00000496116 A0A1W2PQL4 384 aaPredicted RBP10.25□□□□□ -0.77
CMSS1-208ENST00000496116 FAM183AA6NL82 134 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 SOCS6O14544 535 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 CASKO14936 926 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 HCN1O60741 890 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 GAAP10253 952 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 CELP19835 753 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 CTBP2P56545 445 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 PSG6Q00889 435 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 ZSWIM7Q19AV6 140 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 PRPF38BQ5VTL8 546 aaKnown RBP10.25□□□□□ -0.77
CMSS1-208ENST00000496116 GARNL3Q5VVW2 1013 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 NIPAL3Q6P499 406 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 SMARCD3Q6STE5 483 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 FAM131AQ6UXB0 335 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 MEPCEQ7L2J0 689 aaKnown RBP10.25□□□□□ -0.77
CMSS1-208ENST00000496116 GDPD3Q7L5L3 318 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 GRAMD2AQ8IUY3 354 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 MCATQ8IVS2 390 aaKnown RBP10.25□□□□□ -0.77
CMSS1-208ENST00000496116 ACBD7Q8N6N7 88 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 OR51G2Q8NGK0 314 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 ADAMTS18Q8TE60 1221 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 SPRYD4Q8WW59 207 aaPredicted RBP10.25□□□□□ -0.77
CMSS1-208ENST00000496116 RIT1Q92963 219 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 NACC2Q96BF6 587 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 KATNB1Q9BVA0 655 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 IFT27Q9BW83 186 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 MIR1-1HGQ9H1L0 117 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 TBC1D17Q9HA65 648 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 ABCB9Q9NP78 766 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 PLEKHB1Q9UF11 243 aaPredicted RBP10.25□□□□□ -0.77
CMSS1-208ENST00000496116 NDRG2Q9UN36 371 aaKnown RBP10.25□□□□□ -0.77
CMSS1-208ENST00000496116 A0A0B4J2E0 115 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 A0A1B0GX12 115 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 SLC22A31A6NKX4 558 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 PRR23D1E9PI22 279 aaPredicted RBP10.25□□□□□ -0.77
CMSS1-208ENST00000496116 HCRTR1O43613 425 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 LYPD3O95274 346 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 CLEC2LP0C7M8 214 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 PRR23D2P0DMB1 279 aaPredicted RBP10.25□□□□□ -0.77
CMSS1-208ENST00000496116 RNH1P13489 461 aaKnown RBP10.25□□□□□ -0.77
CMSS1-208ENST00000496116 TBXA2RP21731 343 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 GALP22466 123 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 CD79BP40259 229 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 TGM4P49221 684 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 FXYD6P3P58550 94 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 FOXK2Q01167 660 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 CD300CQ08708 224 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 PDZK1Q5T2W1 519 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 XKRXQ6PP77 449 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 ZNF322Q6U7Q0 402 aaPredicted RBP10.25□□□□□ -0.77
CMSS1-208ENST00000496116 AKAP14Q86UN6 197 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 SHISA5Q8N114 240 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 SIRT6Q8N6T7 355 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 ZFP41Q8N8Y5 198 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 GRHL3Q8TE85 626 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 DIRAS2Q96HU8 199 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 ZNF649Q9BS31 505 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 TMED9Q9BVK6 235 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 TRIM2Q9C040 744 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 SRRQ9GZT4 340 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 FOLH1BQ9HBA9 442 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 CMC2Q9NRP2 79 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 ASB6Q9NWX5 421 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 BAIAP2Q9UQB8 552 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 POLHQ9Y253 713 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 SIGLEC7Q9Y286 467 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 PCDHGB2Q9Y5G2 931 aa10.25□□□□□ -0.77
CMSS1-208ENST00000496116 TDRD6O60522 2096 aaKnown RBP10.25□□□□□ -0.77
CMSS1-208ENST00000496116 A0A0A6YYC8 382 aaPredicted RBP10.24□□□□□ -0.77
CMSS1-208ENST00000496116 FABP12A6NFH5 140 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms