RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 CNRIP1Q96F85 164 aaPredicted RBP14.29□□□□□ -0.12
SDF4-207ENST00000494748 OR7D2Q96RA2 312 aa14.29□□□□□ -0.12
SDF4-207ENST00000494748 TRIM36Q9NQ86 728 aa14.29□□□□□ -0.12
SDF4-207ENST00000494748 PPIEQ9UNP9 301 aaKnown RBP14.29□□□□□ -0.12
SDF4-207ENST00000494748 PLSCR5A0PG75 271 aa14.28□□□□□ -0.12
SDF4-207ENST00000494748 M0R233 179 aa14.28□□□□□ -0.12
SDF4-207ENST00000494748 NDUFV2P19404 249 aa14.28□□□□□ -0.12
SDF4-207ENST00000494748 DRD5P21918 477 aa14.28□□□□□ -0.12
SDF4-207ENST00000494748 ATP6V1E1P36543 226 aa14.28□□□□□ -0.12
SDF4-207ENST00000494748 RPL6Q02878 288 aaKnown RBP14.28□□□□□ -0.12
SDF4-207ENST00000494748 SYT9Q86SS6 491 aa14.28□□□□□ -0.12
SDF4-207ENST00000494748 TEX19Q8NA77 164 aa14.28□□□□□ -0.12
SDF4-207ENST00000494748 SRFBP1Q8NEF9 429 aaKnown RBP14.28□□□□□ -0.12
SDF4-207ENST00000494748 SFXN5Q8TD22 340 aa14.28□□□□□ -0.12
SDF4-207ENST00000494748 RGMAQ96B86 450 aa14.28□□□□□ -0.12
SDF4-207ENST00000494748 WDR89Q96FK6 387 aaPredicted RBP14.28□□□□□ -0.12
SDF4-207ENST00000494748 IL36AQ9UHA7 158 aa14.28□□□□□ -0.12
SDF4-207ENST00000494748 ING1Q9UK53 422 aaPredicted RBP14.28□□□□□ -0.12
SDF4-207ENST00000494748 CLEC4AQ9UMR7 237 aa14.28□□□□□ -0.12
SDF4-207ENST00000494748 RWDD3Q9Y3V2 267 aa14.28□□□□□ -0.12
SDF4-207ENST00000494748 DENND4AQ7Z401 1863 aa14.28□□□□□ -0.12
SDF4-207ENST00000494748 H7BY64 318 aa14.28□□□□□ -0.12
SDF4-207ENST00000494748 PGRMC2O15173 223 aa14.28□□□□□ -0.12
SDF4-207ENST00000494748 ADRB1P08588 477 aa14.28□□□□□ -0.12
SDF4-207ENST00000494748 KELP23276 732 aa14.28□□□□□ -0.12
SDF4-207ENST00000494748 BLVRAP53004 296 aa14.28□□□□□ -0.12
SDF4-207ENST00000494748 DYRK1AQ13627 763 aa14.28□□□□□ -0.12
SDF4-207ENST00000494748 DMKNQ6E0U4 476 aaPredicted RBP14.28□□□□□ -0.12
SDF4-207ENST00000494748 OR4C11Q6IEV9 310 aa14.28□□□□□ -0.12
SDF4-207ENST00000494748 RGS7BPQ6MZT1 257 aaPredicted RBP14.28□□□□□ -0.12
SDF4-207ENST00000494748 C17orf64Q86WR6 236 aa14.28□□□□□ -0.12
SDF4-207ENST00000494748 OR2L2Q8NH16 312 aa14.28□□□□□ -0.12
SDF4-207ENST00000494748 GANCQ8TET4 914 aa14.28□□□□□ -0.12
SDF4-207ENST00000494748 SMAP2Q8WU79 429 aaPredicted RBP14.28□□□□□ -0.12
SDF4-207ENST00000494748 PTP4A1Q93096 173 aa14.28□□□□□ -0.12
SDF4-207ENST00000494748 PRAP1Q96NZ9 151 aa14.28□□□□□ -0.12
SDF4-207ENST00000494748 AIF1LQ9BQI0 150 aa14.28□□□□□ -0.12
SDF4-207ENST00000494748 C7orf50Q9BRJ6 194 aaKnown RBP14.28□□□□□ -0.12
SDF4-207ENST00000494748 SDHAF2Q9NX18 166 aa14.28□□□□□ -0.12
SDF4-207ENST00000494748 RDH8Q9NYR8 311 aa14.28□□□□□ -0.12
SDF4-207ENST00000494748 RPS6KB2Q9UBS0 482 aa14.28□□□□□ -0.12
SDF4-207ENST00000494748 C17orf113A0A1B0GUU1 675 aa14.28□□□□□ -0.12
SDF4-207ENST00000494748 TSPAN4O14817 238 aa14.28□□□□□ -0.12
SDF4-207ENST00000494748 CTDSPLO15194 276 aa14.28□□□□□ -0.12
SDF4-207ENST00000494748 POP7O75817 140 aaKnown RBP14.28□□□□□ -0.12
SDF4-207ENST00000494748 TGM6O95932 706 aa14.28□□□□□ -0.12
SDF4-207ENST00000494748 POU3F2P20265 443 aaPredicted RBP14.28□□□□□ -0.12
SDF4-207ENST00000494748 LCN1P31025 176 aa14.28□□□□□ -0.12
SDF4-207ENST00000494748 CCR8P51685 355 aa14.28□□□□□ -0.12
SDF4-207ENST00000494748 SLC3A1Q07837 685 aa14.28□□□□□ -0.12
SDF4-207ENST00000494748 OPCMLQ14982 345 aa14.28□□□□□ -0.12
SDF4-207ENST00000494748 ZNF697Q5TEC3 545 aa14.28□□□□□ -0.12
SDF4-207ENST00000494748 GID4Q8IVV7 300 aa14.28□□□□□ -0.12
SDF4-207ENST00000494748 RPLP0P6Q8NHW5 317 aa14.28□□□□□ -0.12
SDF4-207ENST00000494748 BRIX1Q8TDN6 353 aaKnown RBP14.28□□□□□ -0.12
SDF4-207ENST00000494748 POF1BQ8WVV4 589 aa14.28□□□□□ -0.12
SDF4-207ENST00000494748 CXorf58Q96LI9 332 aa14.28□□□□□ -0.12
SDF4-207ENST00000494748 PRSS27Q9BQR3 290 aa14.28□□□□□ -0.12
SDF4-207ENST00000494748 OR6C2Q9NZP2 312 aa14.28□□□□□ -0.12
SDF4-207ENST00000494748 IGKV1-8A0A0C4DH67 115 aa14.27□□□□□ -0.12
SDF4-207ENST00000494748 SSNA1O43805 119 aa14.27□□□□□ -0.12
SDF4-207ENST00000494748 SYN1P17600 705 aa14.27□□□□□ -0.12
SDF4-207ENST00000494748 XPAP23025 273 aaPredicted RBP14.27□□□□□ -0.12
SDF4-207ENST00000494748 GPR162Q16538 588 aa14.27□□□□□ -0.12
SDF4-207ENST00000494748 GET4Q7L5D6 327 aaPredicted RBP14.27□□□□□ -0.12
SDF4-207ENST00000494748 SMIM4Q8WVI0 70 aa14.27□□□□□ -0.12
SDF4-207ENST00000494748 PMEPA1Q969W9 287 aa14.27□□□□□ -0.12
SDF4-207ENST00000494748 SLC41A3Q96GZ6 507 aa14.27□□□□□ -0.12
SDF4-207ENST00000494748 ZFP3Q96NJ6 502 aa14.27□□□□□ -0.12
SDF4-207ENST00000494748 KLHL31Q9H511 634 aa14.27□□□□□ -0.12
SDF4-207ENST00000494748 CA10Q9NS85 328 aa14.27□□□□□ -0.12
SDF4-207ENST00000494748 ANKRD10Q9NXR5 420 aa14.27□□□□□ -0.12
SDF4-207ENST00000494748 ST6GALNAC2Q9UJ37 374 aa14.27□□□□□ -0.12
SDF4-207ENST00000494748 ZNF223Q9UK11 482 aaPredicted RBP14.27□□□□□ -0.12
SDF4-207ENST00000494748 ASF1AQ9Y294 204 aa14.27□□□□□ -0.12
SDF4-207ENST00000494748 NPFFR2Q9Y5X5 522 aa14.27□□□□□ -0.12
SDF4-207ENST00000494748 A0A1W2PRU2 124 aa14.27□□□□□ -0.13
SDF4-207ENST00000494748 PEX14O75381 377 aa14.27□□□□□ -0.13
SDF4-207ENST00000494748 REM1O75628 298 aa14.27□□□□□ -0.13
SDF4-207ENST00000494748 RGS11O94810 467 aa14.27□□□□□ -0.13
SDF4-207ENST00000494748 SERPIND1P05546 499 aa14.27□□□□□ -0.13
SDF4-207ENST00000494748 EPXP11678 715 aa14.27□□□□□ -0.13
SDF4-207ENST00000494748 ZNF157P51786 506 aaPredicted RBP14.27□□□□□ -0.13
SDF4-207ENST00000494748 TRA2BP62995 288 aaKnown RBP14.27□□□□□ -0.13
SDF4-207ENST00000494748 TCTE1Q5JU00 501 aa14.27□□□□□ -0.13
SDF4-207ENST00000494748 TFAP2EQ6VUC0 442 aa14.27□□□□□ -0.13
SDF4-207ENST00000494748 WDR88Q6ZMY6 472 aa14.27□□□□□ -0.13
SDF4-207ENST00000494748 SSX6Q7RTT6 188 aa14.27□□□□□ -0.13
SDF4-207ENST00000494748 GJD3Q8N144 294 aa14.27□□□□□ -0.13
SDF4-207ENST00000494748 OR5J2Q8NH18 312 aa14.27□□□□□ -0.13
SDF4-207ENST00000494748 GSDMCQ9BYG8 508 aa14.27□□□□□ -0.13
SDF4-207ENST00000494748 ZCCHC2Q9C0B9 1178 aaKnown RBP14.27□□□□□ -0.13
SDF4-207ENST00000494748 NANSQ9NR45 359 aa14.27□□□□□ -0.13
SDF4-207ENST00000494748 MED9Q9NWA0 146 aa14.27□□□□□ -0.13
SDF4-207ENST00000494748 EMC3Q9P0I2 261 aa14.27□□□□□ -0.13
SDF4-207ENST00000494748 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.27□□□□□ -0.13
SDF4-207ENST00000494748 OR6C65A6NJZ3 312 aa14.27□□□□□ -0.13
SDF4-207ENST00000494748 FCMRO60667 390 aa14.27□□□□□ -0.13
SDF4-207ENST00000494748 HMGN1P05114 100 aa14.27□□□□□ -0.13
SDF4-207ENST00000494748 SLC2A5P22732 501 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms