RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 RRAS2P62070 204 aaPredicted RBP10.69□□□□□ -0.7
RFC4-214ENST00000494047 FOXK2Q01167 660 aa10.69□□□□□ -0.7
RFC4-214ENST00000494047 CHRNEQ04844 493 aa10.69□□□□□ -0.7
RFC4-214ENST00000494047 RUNX3Q13761 415 aa10.69□□□□□ -0.7
RFC4-214ENST00000494047 SF3B4Q15427 424 aaKnown RBP eCLIP10.69□□□□□ -0.72e-7■■■■□ 21.8
RFC4-214ENST00000494047 TATDN3Q17R31 274 aa10.69□□□□□ -0.7
RFC4-214ENST00000494047 CCNJQ5T5M9 372 aa10.69□□□□□ -0.7
RFC4-214ENST00000494047 GARNL3Q5VVW2 1013 aa10.69□□□□□ -0.7
RFC4-214ENST00000494047 TRILQ7L0X0 811 aa10.69□□□□□ -0.7
RFC4-214ENST00000494047 GATAD2AQ86YP4 633 aa10.69□□□□□ -0.7
RFC4-214ENST00000494047 GRAMD2AQ8IUY3 354 aa10.69□□□□□ -0.7
RFC4-214ENST00000494047 NRMQ8IXM6 262 aa10.69□□□□□ -0.7
RFC4-214ENST00000494047 CMIPQ8IY22 773 aa10.69□□□□□ -0.7
RFC4-214ENST00000494047 SYS1Q8N2H4 156 aa10.69□□□□□ -0.7
RFC4-214ENST00000494047 FAM109AQ8N4B1 249 aa10.69□□□□□ -0.7
RFC4-214ENST00000494047 TMEM105Q8N8V8 129 aa10.69□□□□□ -0.7
RFC4-214ENST00000494047 OR8D4Q8NGM9 314 aa10.69□□□□□ -0.7
RFC4-214ENST00000494047 RFT1Q96AA3 541 aa10.69□□□□□ -0.7
RFC4-214ENST00000494047 GIMAP5Q96F15 307 aa10.69□□□□□ -0.7
RFC4-214ENST00000494047 IER2Q9BTL4 223 aa10.69□□□□□ -0.7
RFC4-214ENST00000494047 RANBP3Q9H6Z4 567 aaPredicted RBP10.69□□□□□ -0.7
RFC4-214ENST00000494047 C8orf33Q9H7E9 229 aaPredicted RBP10.69□□□□□ -0.7
RFC4-214ENST00000494047 TMEM27Q9HBJ8 222 aa10.69□□□□□ -0.7
RFC4-214ENST00000494047 CYSLTR2Q9NS75 346 aa10.69□□□□□ -0.7
RFC4-214ENST00000494047 COMMD3Q9UBI1 195 aa10.69□□□□□ -0.7
RFC4-214ENST00000494047 STON1Q9Y6Q2 735 aa10.69□□□□□ -0.7
RFC4-214ENST00000494047 PIEZO1Q92508 2521 aa10.68□□□□□ -0.7
RFC4-214ENST00000494047 A0A1B0GVI7 797 aa10.68□□□□□ -0.7
RFC4-214ENST00000494047 DAPL1A0PJW8 107 aa10.68□□□□□ -0.7
RFC4-214ENST00000494047 TNFRSF10CO14798 259 aa10.68□□□□□ -0.7
RFC4-214ENST00000494047 TFECO14948 347 aaPredicted RBP10.68□□□□□ -0.7
RFC4-214ENST00000494047 MID1O15344 667 aa10.68□□□□□ -0.7
RFC4-214ENST00000494047 ALX3O95076 343 aa10.68□□□□□ -0.7
RFC4-214ENST00000494047 IGF2P01344 180 aa10.68□□□□□ -0.7
RFC4-214ENST00000494047 IGFBP1P08833 259 aaPredicted RBP10.68□□□□□ -0.7
RFC4-214ENST00000494047 PSKH1P11801 424 aa10.68□□□□□ -0.7
RFC4-214ENST00000494047 HK1P19367 917 aa10.68□□□□□ -0.7
RFC4-214ENST00000494047 NPR2P20594 1047 aa10.68□□□□□ -0.7
RFC4-214ENST00000494047 SLC6A6P31641 620 aa10.68□□□□□ -0.7
RFC4-214ENST00000494047 AVPR1BP47901 424 aa10.68□□□□□ -0.7
RFC4-214ENST00000494047 PITPNBP48739 271 aa10.68□□□□□ -0.7
RFC4-214ENST00000494047 GZMKP49863 264 aa10.68□□□□□ -0.7
RFC4-214ENST00000494047 AP3S2P59780 193 aa10.68□□□□□ -0.7
RFC4-214ENST00000494047 EEF1A1P68104 462 aaKnown RBP10.68□□□□□ -0.7
RFC4-214ENST00000494047 MRPS10P82664 201 aaKnown RBP10.68□□□□□ -0.7
RFC4-214ENST00000494047 FAPQ12884 760 aa10.68□□□□□ -0.7
RFC4-214ENST00000494047 CCDC58Q4VC31 144 aa10.68□□□□□ -0.7
RFC4-214ENST00000494047 YIF1BQ5BJH7 314 aa10.68□□□□□ -0.7
RFC4-214ENST00000494047 EXOSC6Q5RKV6 272 aaKnown RBP10.68□□□□□ -0.7
RFC4-214ENST00000494047 OR2G6Q5TZ20 316 aa10.68□□□□□ -0.7
RFC4-214ENST00000494047 SLC22A10Q63ZE4 541 aa10.68□□□□□ -0.7
RFC4-214ENST00000494047 SMARCD3Q6STE5 483 aa10.68□□□□□ -0.7
RFC4-214ENST00000494047 PAQR6Q6TCH4 344 aa10.68□□□□□ -0.7
RFC4-214ENST00000494047 OAFQ86UD1 273 aa10.68□□□□□ -0.7
RFC4-214ENST00000494047 C2orf73Q8N5S3 287 aaPredicted RBP10.68□□□□□ -0.7
RFC4-214ENST00000494047 OR9A2Q8NGT5 310 aa10.68□□□□□ -0.7
RFC4-214ENST00000494047 OR4C6Q8NH72 309 aa10.68□□□□□ -0.7
RFC4-214ENST00000494047 UBASH3BQ8TF42 649 aa10.68□□□□□ -0.7
RFC4-214ENST00000494047 TMEM239Q8WW34 195 aa10.68□□□□□ -0.7
RFC4-214ENST00000494047 LCN9Q8WX39 176 aa10.68□□□□□ -0.7
RFC4-214ENST00000494047 TMEM246Q9BRR3 403 aa10.68□□□□□ -0.7
RFC4-214ENST00000494047 ALG8Q9BVK2 526 aa10.68□□□□□ -0.7
RFC4-214ENST00000494047 TRIM2Q9C040 744 aa10.68□□□□□ -0.7
RFC4-214ENST00000494047 TWSG1Q9GZX9 223 aa10.68□□□□□ -0.7
RFC4-214ENST00000494047 OR52D1Q9H346 318 aa10.68□□□□□ -0.7
RFC4-214ENST00000494047 UBQLN3Q9H347 655 aa10.68□□□□□ -0.7
RFC4-214ENST00000494047 MARCH7Q9H992 704 aa10.68□□□□□ -0.7
RFC4-214ENST00000494047 POLMQ9NP87 494 aaPredicted RBP10.68□□□□□ -0.7
RFC4-214ENST00000494047 CNIH4Q9P003 139 aa10.68□□□□□ -0.7
RFC4-214ENST00000494047 NDRG2Q9UN36 371 aaKnown RBP10.68□□□□□ -0.7
RFC4-214ENST00000494047 ING4Q9UNL4 249 aa10.68□□□□□ -0.7
RFC4-214ENST00000494047 NUBP2Q9Y5Y2 271 aa10.68□□□□□ -0.7
RFC4-214ENST00000494047 ISM1B1AKI9 464 aa10.67□□□□□ -0.7
RFC4-214ENST00000494047 INMT-MINDY4F8WBC2 141 aa10.67□□□□□ -0.7
RFC4-214ENST00000494047 WWP2O00308 870 aa10.67□□□□□ -0.7
RFC4-214ENST00000494047 PGRMC2O15173 223 aa10.67□□□□□ -0.7
RFC4-214ENST00000494047 CTDSPLO15194 276 aa10.67□□□□□ -0.7
RFC4-214ENST00000494047 CHP2O43745 196 aa10.67□□□□□ -0.7
RFC4-214ENST00000494047 GPRIN2O60269 458 aa10.67□□□□□ -0.7
RFC4-214ENST00000494047 PPM1BO75688 479 aa10.67□□□□□ -0.7
RFC4-214ENST00000494047 UBL3O95164 117 aa10.67□□□□□ -0.7
RFC4-214ENST00000494047 APBB3O95704 486 aa10.67□□□□□ -0.7
RFC4-214ENST00000494047 CEACAM5P06731 702 aa10.67□□□□□ -0.7
RFC4-214ENST00000494047 CHRM5P08912 532 aaPredicted RBP10.67□□□□□ -0.7
RFC4-214ENST00000494047 CPMP14384 443 aa10.67□□□□□ -0.7
RFC4-214ENST00000494047 MAGP20916 626 aa10.67□□□□□ -0.7
RFC4-214ENST00000494047 TCEA1P23193 301 aaKnown RBP10.67□□□□□ -0.7
RFC4-214ENST00000494047 OPRD1P41143 372 aa10.67□□□□□ -0.7
RFC4-214ENST00000494047 KIR2DL3P43628 341 aa10.67□□□□□ -0.7
RFC4-214ENST00000494047 METAP1P53582 386 aa10.67□□□□□ -0.7
RFC4-214ENST00000494047 RPL6Q02878 288 aaKnown RBP10.67□□□□□ -0.7
RFC4-214ENST00000494047 ZNF155Q12901 538 aaPredicted RBP10.67□□□□□ -0.7
RFC4-214ENST00000494047 BIKQ13323 160 aa10.67□□□□□ -0.7
RFC4-214ENST00000494047 ZNHIT3Q15649 155 aaPredicted RBP10.67□□□□□ -0.7
RFC4-214ENST00000494047 CLPPQ16740 277 aaPredicted RBP10.67□□□□□ -0.7
RFC4-214ENST00000494047 ISXQ2M1V0 245 aa10.67□□□□□ -0.7
RFC4-214ENST00000494047 AMZ1Q400G9 498 aa10.67□□□□□ -0.7
RFC4-214ENST00000494047 ZMAT1Q5H9K5 638 aa10.67□□□□□ -0.7
RFC4-214ENST00000494047 SLC35D3Q5M8T2 416 aa10.67□□□□□ -0.7
RFC4-214ENST00000494047 SLC30A6Q6NXT4 461 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms