RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 FAM98BQ52LJ0 330 aaKnown RBP7.56□□□□□ -1.2
HDAC6-234ENST00000493923 ARL13AQ5H913 290 aaPredicted RBP7.56□□□□□ -1.2
HDAC6-234ENST00000493923 ZNF766Q5HY98 468 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 ABHD17BQ5VST6 288 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 ZNF691Q5VV52 312 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 TMEM236Q5W0B7 351 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 SPINK14Q6IE38 97 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 TYW3Q6IPR3 259 aaKnown RBP7.56□□□□□ -1.2
HDAC6-234ENST00000493923 NXPE4Q6UWF7 544 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 GFRALQ6UXV0 394 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 ZNF600Q6ZNG1 722 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 FGD2Q7Z6J4 655 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 THOC6Q86W42 341 aaKnown RBP7.56□□□□□ -1.2
HDAC6-234ENST00000493923 ZDHHC13Q8IUH4 622 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 CELF2-AS1Q8N7Q2 184 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 NFAM1Q8NET5 270 aaPredicted RBP7.56□□□□□ -1.2
HDAC6-234ENST00000493923 NT5CQ8TCD5 201 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 KCTD4Q8WVF5 259 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 ITLN2Q8WWU7 325 aaPredicted RBP7.56□□□□□ -1.2
HDAC6-234ENST00000493923 METTL21AQ8WXB1 218 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 ESAMQ96AP7 390 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 PDLIM5Q96HC4 596 aaKnown RBP7.56□□□□□ -1.2
HDAC6-234ENST00000493923 MARK4Q96L34 752 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 NSMCE2Q96MF7 247 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 TRMOQ9BU70 441 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 ITPAQ9BY32 194 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 SLC6A16Q9GZN6 736 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 ROGDIQ9GZN7 287 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 CCDC90BQ9GZT6 254 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 RNF32Q9H0A6 362 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 PCBD2Q9H0N5 130 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 RHBGQ9H310 441 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 FANCFQ9NPI8 374 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 IGSF5Q9NSI5 407 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 FAM118AQ9NWS6 357 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 ABI3Q9P2A4 366 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 SH3BGRL2Q9UJC5 107 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 SLC22A14Q9Y267 594 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 ASB1Q9Y576 335 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 F8P00451 2351 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 CELSR1Q9NYQ6 3014 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 AKAP6Q13023 2319 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 INTS1Q8N201 2190 aaKnown RBP7.55□□□□□ -1.2
HDAC6-234ENST00000493923 IGKV3D-11A0A0A0MRZ8 115 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 TCRBV5S2A0A599 114 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 OR6C70A6NIJ9 312 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 MAGEB17A8MXT2 336 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 AIREO43918 545 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 PRKNO60260 465 aaPredicted RBP7.55□□□□□ -1.2
HDAC6-234ENST00000493923 NEURL1O76050 574 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 RAP2AP10114 183 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 ICAM2P13598 275 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 EPORP19235 508 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 TNNI3P19429 210 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 CD22P20273 847 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 ZP3P21754 424 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 CPN2P22792 545 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 PSMB9P28065 219 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 ARRB2P32121 409 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 SLC6A12P48065 614 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 MRPL19P49406 292 aaKnown RBP7.55□□□□□ -1.2
HDAC6-234ENST00000493923 OR4D2P58180 307 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 GPR85P60893 370 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 VBP1P61758 197 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 ADORA2A-AS1P86434 159 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 HSF1Q00613 529 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 EMX1Q04741 257 aaPredicted RBP7.55□□□□□ -1.2
HDAC6-234ENST00000493923 CHRNB3Q05901 458 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 SNTA1Q13424 505 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 ASAH1Q13510 395 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 CSHL1Q14406 222 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 QPRTQ15274 297 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 OR4D1Q15615 310 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 OR1C1Q15619 314 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 NSDHLQ15738 373 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 C3AR1Q16581 482 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 CLLU1Q5K131 121 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 LYPD8Q6UX82 237 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 C16orf47Q6ZP98 133 aaPredicted RBP7.55□□□□□ -1.2
HDAC6-234ENST00000493923 SLCO4C1Q6ZQN7 724 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 TMPRSS11BQ86T26 416 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 CCDC190Q86UF4 302 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 SPPL2CQ8IUH8 684 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 SNX29P2Q8IUI4 249 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 SIAH3Q8IW03 269 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 CDH26Q8IXH8 852 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 RDH10Q8IZV5 341 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 CA13Q8N1Q1 262 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 DEPDC4Q8N2C3 294 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 M1APQ8TC57 530 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 ELP5Q8TE02 316 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 PTP4A1Q93096 173 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 RELTQ969Z4 430 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 TBC1D20Q96BZ9 403 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 INTS12Q96CB8 462 aaKnown RBP7.55□□□□□ -1.2
HDAC6-234ENST00000493923 SCMH1Q96GD3 660 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 CCDC120Q96HB5 630 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 DMRTB1Q96MA1 342 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 FRMD6Q96NE9 622 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 QRFPRQ96P65 431 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms