RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 OTULINQ96BN8 352 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 RBM18Q96H35 190 aaKnown RBP8.95□□□□□ -0.98
NPHP3-209ENST00000493732 PELOQ9BRX2 385 aaKnown RBP8.95□□□□□ -0.98
NPHP3-209ENST00000493732 G6PC3Q9BUM1 346 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 DPH1Q9BZG8 443 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 HINT3Q9NQE9 182 aaKnown RBP8.95□□□□□ -0.98
NPHP3-209ENST00000493732 C14orf119Q9NWQ9 140 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 BABAM2Q9NXR7 383 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 HAO2Q9NYQ3 351 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 POMT2Q9UKY4 750 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 CSNK1G3Q9Y6M4 447 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 GOLGA4Q13439 2230 aaKnown RBP8.95□□□□□ -0.98
NPHP3-209ENST00000493732 CHD7Q9P2D1 2997 aa8.94□□□□□ -0.98
NPHP3-209ENST00000493732 DAPL1A0PJW8 107 aa8.94□□□□□ -0.98
NPHP3-209ENST00000493732 ZNF860A6NHJ4 632 aa8.94□□□□□ -0.98
NPHP3-209ENST00000493732 H3BQ06 376 aaPredicted RBP8.94□□□□□ -0.98
NPHP3-209ENST00000493732 J3QRE1 110 aa8.94□□□□□ -0.98
NPHP3-209ENST00000493732 CDC42EP2O14613 210 aa8.94□□□□□ -0.98
NPHP3-209ENST00000493732 POLR1CO15160 346 aaPredicted RBP8.94□□□□□ -0.98
NPHP3-209ENST00000493732 PIP5K1CO60331 668 aa8.94□□□□□ -0.98
NPHP3-209ENST00000493732 ATP6V1G1O75348 118 aa8.94□□□□□ -0.98
NPHP3-209ENST00000493732 MT-ND5P03915 603 aa8.94□□□□□ -0.98
NPHP3-209ENST00000493732 SAGP10523 405 aaPredicted RBP8.94□□□□□ -0.98
NPHP3-209ENST00000493732 ZNF3P17036 446 aa8.94□□□□□ -0.98
NPHP3-209ENST00000493732 HK1P19367 917 aa8.94□□□□□ -0.98
NPHP3-209ENST00000493732 HTR2AP28223 471 aa8.94□□□□□ -0.98
NPHP3-209ENST00000493732 SLC6A6P31641 620 aa8.94□□□□□ -0.98
NPHP3-209ENST00000493732 SOX18P35713 384 aa8.94□□□□□ -0.98
NPHP3-209ENST00000493732 MTNR1BP49286 362 aa8.94□□□□□ -0.98
NPHP3-209ENST00000493732 OR2B6P58173 313 aa8.94□□□□□ -0.98
NPHP3-209ENST00000493732 HHEXQ03014 270 aa8.94□□□□□ -0.98
NPHP3-209ENST00000493732 SELENBP1Q13228 472 aa8.94□□□□□ -0.98
NPHP3-209ENST00000493732 GALEQ14376 348 aa8.94□□□□□ -0.98
NPHP3-209ENST00000493732 ZNF79Q15937 498 aa8.94□□□□□ -0.98
NPHP3-209ENST00000493732 MAPK14Q16539 360 aa8.94□□□□□ -0.98
NPHP3-209ENST00000493732 COL13A1Q5TAT6 717 aaPredicted RBP8.94□□□□□ -0.98
NPHP3-209ENST00000493732 PLBD1Q6P4A8 553 aa8.94□□□□□ -0.98
NPHP3-209ENST00000493732 DGLUCYQ7Z3D6 616 aa8.94□□□□□ -0.98
NPHP3-209ENST00000493732 C11orf74Q86VG3 221 aa8.94□□□□□ -0.98
NPHP3-209ENST00000493732 MEX3DQ86XN8 651 aaKnown RBP8.94□□□□□ -0.98
NPHP3-209ENST00000493732 ZNF595Q8IYB9 648 aa8.94□□□□□ -0.98
NPHP3-209ENST00000493732 CACTIN-AS1Q8N1I8 211 aa8.94□□□□□ -0.98
NPHP3-209ENST00000493732 ARIH2OSQ8N7S6 290 aa8.94□□□□□ -0.98
NPHP3-209ENST00000493732 LSMEM1Q8N8F7 131 aa8.94□□□□□ -0.98
NPHP3-209ENST00000493732 SCAIQ8N9R8 606 aa8.94□□□□□ -0.98
NPHP3-209ENST00000493732 ATP6V1C2Q8NEY4 427 aa8.94□□□□□ -0.98
NPHP3-209ENST00000493732 NEIL3Q8TAT5 605 aa8.94□□□□□ -0.98
NPHP3-209ENST00000493732 SPRYD4Q8WW59 207 aaPredicted RBP8.94□□□□□ -0.98
NPHP3-209ENST00000493732 ANKRD9Q96BM1 317 aaPredicted RBP8.94□□□□□ -0.98
NPHP3-209ENST00000493732 KCTD12Q96CX2 325 aaKnown RBP8.94□□□□□ -0.98
NPHP3-209ENST00000493732 MRPL48Q96GC5 212 aaKnown RBP8.94□□□□□ -0.98
NPHP3-209ENST00000493732 CCNL2Q96S94 520 aaPredicted RBP8.94□□□□□ -0.98
NPHP3-209ENST00000493732 TM9SF2Q99805 663 aa8.94□□□□□ -0.98
NPHP3-209ENST00000493732 NDC1Q9BTX1 674 aa8.94□□□□□ -0.98
NPHP3-209ENST00000493732 IFT27Q9BW83 186 aa8.94□□□□□ -0.98
NPHP3-209ENST00000493732 CLDND1Q9NY35 253 aa8.94□□□□□ -0.98
NPHP3-209ENST00000493732 TBC1D24Q9ULP9 559 aa8.94□□□□□ -0.98
NPHP3-209ENST00000493732 SIGLEC7Q9Y286 467 aa8.94□□□□□ -0.98
NPHP3-209ENST00000493732 NTNG1Q9Y2I2 539 aa8.94□□□□□ -0.98
NPHP3-209ENST00000493732 A0A0B4J2E0 115 aa8.93□□□□□ -0.98
NPHP3-209ENST00000493732 A0A1B0GX12 115 aa8.93□□□□□ -0.98
NPHP3-209ENST00000493732 C12orf71A8MTZ7 269 aa8.93□□□□□ -0.98
NPHP3-209ENST00000493732 GABRPO00591 440 aa8.93□□□□□ -0.98
NPHP3-209ENST00000493732 NARSO43776 548 aaKnown RBP8.93□□□□□ -0.98
NPHP3-209ENST00000493732 PRAMEF2O60811 474 aa8.93□□□□□ -0.98
NPHP3-209ENST00000493732 CTNSO60931 367 aa8.93□□□□□ -0.98
NPHP3-209ENST00000493732 CCNKO75909 580 aa8.93□□□□□ -0.98
NPHP3-209ENST00000493732 RGS9O75916 674 aaPredicted RBP8.93□□□□□ -0.98
NPHP3-209ENST00000493732 APOL3O95236 402 aa8.93□□□□□ -0.98
NPHP3-209ENST00000493732 LYPD3O95274 346 aa8.93□□□□□ -0.98
NPHP3-209ENST00000493732 THEGLP0DJG4 465 aa8.93□□□□□ -0.98
NPHP3-209ENST00000493732 PEPDP12955 493 aa8.93□□□□□ -0.98
NPHP3-209ENST00000493732 CASP3P42574 277 aa8.93□□□□□ -0.98
NPHP3-209ENST00000493732 FOXK2Q01167 660 aa8.93□□□□□ -0.98
NPHP3-209ENST00000493732 ID2Q02363 134 aa8.93□□□□□ -0.98
NPHP3-209ENST00000493732 STX4Q12846 297 aa8.93□□□□□ -0.98
NPHP3-209ENST00000493732 RIN1Q13671 783 aa8.93□□□□□ -0.98
NPHP3-209ENST00000493732 LCN1P1Q5VSP4 162 aa8.93□□□□□ -0.98
NPHP3-209ENST00000493732 MZT2BQ6NZ67 158 aa8.93□□□□□ -0.98
NPHP3-209ENST00000493732 ARHGAP11AQ6P4F7 1023 aa8.93□□□□□ -0.98
NPHP3-209ENST00000493732 ULK3Q6PHR2 472 aa8.93□□□□□ -0.98
NPHP3-209ENST00000493732 FIGNL1Q6PIW4 674 aa8.93□□□□□ -0.98
NPHP3-209ENST00000493732 ZNF517Q6ZMY9 492 aaPredicted RBP8.93□□□□□ -0.98
NPHP3-209ENST00000493732 NCCRP1Q6ZVX7 275 aaPredicted RBP8.93□□□□□ -0.98
NPHP3-209ENST00000493732 TPRA1Q86W33 373 aa8.93□□□□□ -0.98
NPHP3-209ENST00000493732 PARGQ86W56 976 aa8.93□□□□□ -0.98
NPHP3-209ENST00000493732 MARCH9Q86YJ5 346 aa8.93□□□□□ -0.98
NPHP3-209ENST00000493732 ZNF440Q8IYI8 595 aa8.93□□□□□ -0.98
NPHP3-209ENST00000493732 UBQLNLQ8IYU4 475 aa8.93□□□□□ -0.98
NPHP3-209ENST00000493732 OR51G2Q8NGK0 314 aa8.93□□□□□ -0.98
NPHP3-209ENST00000493732 HMGB4Q8WW32 186 aa8.93□□□□□ -0.98
NPHP3-209ENST00000493732 ZNF649Q9BS31 505 aa8.93□□□□□ -0.98
NPHP3-209ENST00000493732 ALG8Q9BVK2 526 aa8.93□□□□□ -0.98
NPHP3-209ENST00000493732 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.93□□□□□ -0.98
NPHP3-209ENST00000493732 UCK1Q9HA47 277 aa8.93□□□□□ -0.98
NPHP3-209ENST00000493732 TBC1D17Q9HA65 648 aa8.93□□□□□ -0.98
NPHP3-209ENST00000493732 Q9N2J8 555 aa8.93□□□□□ -0.98
NPHP3-209ENST00000493732 GPR27Q9NS67 375 aa8.93□□□□□ -0.98
NPHP3-209ENST00000493732 EVA1BQ9NVM1 165 aa8.93□□□□□ -0.98
NPHP3-209ENST00000493732 RPS6KB2Q9UBS0 482 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms