RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 GTF2IRD2BQ6EKJ0 949 aa12.14□□□□□ -0.47
SAMM50-204ENST00000493161 SYT10Q6XYQ8 523 aa12.14□□□□□ -0.47
SAMM50-204ENST00000493161 BHLHA15Q7RTS1 189 aaPredicted RBP12.14□□□□□ -0.47
SAMM50-204ENST00000493161 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.14□□□□□ -0.47
SAMM50-204ENST00000493161 GTF2IRD2Q86UP8 949 aa12.14□□□□□ -0.47
SAMM50-204ENST00000493161 CCNYL1Q8N7R7 359 aa12.14□□□□□ -0.47
SAMM50-204ENST00000493161 ATP6V1C2Q8NEY4 427 aa12.14□□□□□ -0.47
SAMM50-204ENST00000493161 NUP43Q8NFH3 380 aa12.14□□□□□ -0.47
SAMM50-204ENST00000493161 B4GALNT2Q8NHY0 566 aa12.14□□□□□ -0.47
SAMM50-204ENST00000493161 KISS1RQ969F8 398 aaPredicted RBP12.14□□□□□ -0.47
SAMM50-204ENST00000493161 HS6ST2Q96MM7 605 aa12.14□□□□□ -0.47
SAMM50-204ENST00000493161 CXorf36Q9H7Y0 433 aa12.14□□□□□ -0.47
SAMM50-204ENST00000493161 COQ10BQ9H8M1 238 aa12.14□□□□□ -0.47
SAMM50-204ENST00000493161 CISD1Q9NZ45 108 aaKnown RBP12.14□□□□□ -0.47
SAMM50-204ENST00000493161 NPAP1Q9NZP6 1156 aa12.14□□□□□ -0.47
SAMM50-204ENST00000493161 PRSS50Q9UI38 385 aa12.14□□□□□ -0.47
SAMM50-204ENST00000493161 ING1Q9UK53 422 aaPredicted RBP12.14□□□□□ -0.47
SAMM50-204ENST00000493161 CCL27Q9Y4X3 112 aa12.14□□□□□ -0.47
SAMM50-204ENST00000493161 PTGDR2Q9Y5Y4 395 aa12.14□□□□□ -0.47
SAMM50-204ENST00000493161 FAM234BA2RU67 622 aa12.13□□□□□ -0.47
SAMM50-204ENST00000493161 TTC36A6NLP5 189 aa12.13□□□□□ -0.47
SAMM50-204ENST00000493161 C9JVG2 144 aa12.13□□□□□ -0.47
SAMM50-204ENST00000493161 GOLGA8RI6L899 631 aa12.13□□□□□ -0.47
SAMM50-204ENST00000493161 ZNF195O14628 629 aa12.13□□□□□ -0.47
SAMM50-204ENST00000493161 PDPK1O15530 556 aa12.13□□□□□ -0.47
SAMM50-204ENST00000493161 AKAP10O43572 662 aa12.13□□□□□ -0.47
SAMM50-204ENST00000493161 LYZL6O75951 148 aa12.13□□□□□ -0.47
SAMM50-204ENST00000493161 PRKD3O94806 890 aa12.13□□□□□ -0.47
SAMM50-204ENST00000493161 IFI6P09912 130 aa12.13□□□□□ -0.47
SAMM50-204ENST00000493161 ECHS1P30084 290 aa12.13□□□□□ -0.47
SAMM50-204ENST00000493161 GPC1P35052 558 aa12.13□□□□□ -0.47
SAMM50-204ENST00000493161 IRX1P78414 480 aaPredicted RBP12.13□□□□□ -0.47
SAMM50-204ENST00000493161 SRSF2Q01130 221 aaKnown RBP12.13□□□□□ -0.47
SAMM50-204ENST00000493161 ITGADQ13349 1161 aa12.13□□□□□ -0.47
SAMM50-204ENST00000493161 KIAA0040Q15053 153 aa12.13□□□□□ -0.47
SAMM50-204ENST00000493161 RNPS1Q15287 305 aaKnown RBP12.13□□□□□ -0.47
SAMM50-204ENST00000493161 STK11Q15831 433 aa12.13□□□□□ -0.47
SAMM50-204ENST00000493161 IMPG1Q17R60 797 aa12.13□□□□□ -0.47
SAMM50-204ENST00000493161 NDUFAF6Q330K2 333 aa12.13□□□□□ -0.47
SAMM50-204ENST00000493161 KRTAP24-1Q3LI83 254 aa12.13□□□□□ -0.47
SAMM50-204ENST00000493161 TMEM176BQ3YBM2 270 aaPredicted RBP12.13□□□□□ -0.47
SAMM50-204ENST00000493161 CBLN3Q6UW01 205 aa12.13□□□□□ -0.47
SAMM50-204ENST00000493161 TIFABQ6ZNK6 161 aa12.13□□□□□ -0.47
SAMM50-204ENST00000493161 IKBIPQ70UQ0 350 aa12.13□□□□□ -0.47
SAMM50-204ENST00000493161 FCRLAQ7L513 359 aa12.13□□□□□ -0.47
SAMM50-204ENST00000493161 SZRD1Q7Z422 152 aa12.13□□□□□ -0.47
SAMM50-204ENST00000493161 TRIM46Q7Z4K8 759 aa12.13□□□□□ -0.47
SAMM50-204ENST00000493161 DTX2Q86UW9 622 aa12.13□□□□□ -0.47
SAMM50-204ENST00000493161 MMGT1Q8N4V1 131 aa12.13□□□□□ -0.47
SAMM50-204ENST00000493161 CDRT4Q8N9R6 151 aa12.13□□□□□ -0.47
SAMM50-204ENST00000493161 FBXO27Q8NI29 283 aa12.13□□□□□ -0.47
SAMM50-204ENST00000493161 ZNF775Q96BV0 537 aaPredicted RBP12.13□□□□□ -0.47
SAMM50-204ENST00000493161 REXO5Q96IC2 774 aaKnown RBP12.13□□□□□ -0.47
SAMM50-204ENST00000493161 POTEKPQ9BYX7 375 aa12.13□□□□□ -0.47
SAMM50-204ENST00000493161 LRTM1Q9HBL6 345 aa12.13□□□□□ -0.47
SAMM50-204ENST00000493161 NGBQ9NPG2 151 aa12.13□□□□□ -0.47
SAMM50-204ENST00000493161 UBQLN4Q9NRR5 601 aa12.13□□□□□ -0.47
SAMM50-204ENST00000493161 STK38LQ9Y2H1 464 aa12.13□□□□□ -0.47
SAMM50-204ENST00000493161 NBEAL1Q6ZS30 2694 aa12.13□□□□□ -0.47
SAMM50-204ENST00000493161 NPIPA5A0A0B4J1W7 369 aa12.12□□□□□ -0.47
SAMM50-204ENST00000493161 CCDC151A5D8V7 595 aa12.12□□□□□ -0.47
SAMM50-204ENST00000493161 NPIPA7E9PJI5 369 aa12.12□□□□□ -0.47
SAMM50-204ENST00000493161 NPIPB8E9PQR5 432 aa12.12□□□□□ -0.47
SAMM50-204ENST00000493161 YES1P07947 543 aa12.12□□□□□ -0.47
SAMM50-204ENST00000493161 PABPC4LP0CB38 370 aaKnown RBP12.12□□□□□ -0.47
SAMM50-204ENST00000493161 FAM157CP0CG43 387 aa12.12□□□□□ -0.47
SAMM50-204ENST00000493161 NPIPA8P0DM63 369 aa12.12□□□□□ -0.47
SAMM50-204ENST00000493161 CDH11P55287 796 aa12.12□□□□□ -0.47
SAMM50-204ENST00000493161 P2RY6Q15077 328 aa12.12□□□□□ -0.47
SAMM50-204ENST00000493161 TMEM249Q2WGJ8 235 aa12.12□□□□□ -0.47
SAMM50-204ENST00000493161 VPS26BQ4G0F5 336 aa12.12□□□□□ -0.47
SAMM50-204ENST00000493161 EXOSC6Q5RKV6 272 aaKnown RBP12.12□□□□□ -0.47
SAMM50-204ENST00000493161 SLC22A9Q8IVM8 553 aa12.12□□□□□ -0.47
SAMM50-204ENST00000493161 OR10H5Q8NGA6 315 aa12.12□□□□□ -0.47
SAMM50-204ENST00000493161 OR6Y1Q8NGX8 325 aa12.12□□□□□ -0.47
SAMM50-204ENST00000493161 FAM76AQ8TAV0 307 aa12.12□□□□□ -0.47
SAMM50-204ENST00000493161 IFT81Q8WYA0 676 aa12.12□□□□□ -0.47
SAMM50-204ENST00000493161 CPNE4Q96A23 557 aaPredicted RBP12.12□□□□□ -0.47
SAMM50-204ENST00000493161 RHNO1Q9BSD3 238 aa12.12□□□□□ -0.47
SAMM50-204ENST00000493161 ALG2Q9H553 416 aa12.12□□□□□ -0.47
SAMM50-204ENST00000493161 GIN1Q9NXP7 522 aa12.12□□□□□ -0.47
SAMM50-204ENST00000493161 NTMQ9P121 344 aa12.12□□□□□ -0.47
SAMM50-204ENST00000493161 EMCNQ9ULC0 261 aa12.12□□□□□ -0.47
SAMM50-204ENST00000493161 WBP11Q9Y2W2 641 aaKnown RBP12.12□□□□□ -0.47
SAMM50-204ENST00000493161 SNX8Q9Y5X2 465 aa12.12□□□□□ -0.47
SAMM50-204ENST00000493161 CADP27708 2225 aa12.11□□□□□ -0.47
SAMM50-204ENST00000493161 A0A087WUV0 522 aaPredicted RBP12.11□□□□□ -0.47
SAMM50-204ENST00000493161 EXOC1LA0A1B0GW35 172 aa12.11□□□□□ -0.47
SAMM50-204ENST00000493161 A0A1W2PNR3 127 aa12.11□□□□□ -0.47
SAMM50-204ENST00000493161 A0A1W2PQD3 144 aa12.11□□□□□ -0.47
SAMM50-204ENST00000493161 G3V2L1 256 aa12.11□□□□□ -0.47
SAMM50-204ENST00000493161 SCDO00767 359 aa12.11□□□□□ -0.47
SAMM50-204ENST00000493161 ABCD4O14678 606 aa12.11□□□□□ -0.47
SAMM50-204ENST00000493161 SEC22BO75396 215 aa12.11□□□□□ -0.47
SAMM50-204ENST00000493161 RSL1D1O76021 490 aaKnown RBP12.11□□□□□ -0.47
SAMM50-204ENST00000493161 F12P00748 615 aaPredicted RBP12.11□□□□□ -0.47
SAMM50-204ENST00000493161 HPGDP15428 266 aa12.11□□□□□ -0.47
SAMM50-204ENST00000493161 OR3A2P47893 321 aa12.11□□□□□ -0.47
SAMM50-204ENST00000493161 NUDT6P53370 316 aa12.11□□□□□ -0.47
SAMM50-204ENST00000493161 ETF1P62495 437 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms