RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 MTERF4Q7Z6M4 381 aaKnown RBP22.23■■□□□ 1.15
UPF3A-209ENST00000492270 GGNQ86UU5 652 aa22.23■■□□□ 1.15
UPF3A-209ENST00000492270 POC1BQ8TC44 478 aa22.23■■□□□ 1.15
UPF3A-209ENST00000492270 LRRC8CQ8TDW0 803 aa22.23■■□□□ 1.15
UPF3A-209ENST00000492270 RNF145Q96MT1 663 aa22.23■■□□□ 1.15
UPF3A-209ENST00000492270 C7orf26Q96N11 449 aa22.23■■□□□ 1.15
UPF3A-209ENST00000492270 MKLN1Q9UL63 735 aa22.23■■□□□ 1.15
UPF3A-209ENST00000492270 DTNAQ9Y4J8 743 aa22.23■■□□□ 1.15
UPF3A-209ENST00000492270 AP4B1Q9Y6B7 739 aa22.23■■□□□ 1.15
UPF3A-209ENST00000492270 POLQO75417 2590 aa22.23■■□□□ 1.15
UPF3A-209ENST00000492270 SLC22A20A6NK97 555 aa22.22■■□□□ 1.15
UPF3A-209ENST00000492270 SYT5O00445 386 aa22.22■■□□□ 1.15
UPF3A-209ENST00000492270 IL18BPO95998 194 aa22.22■■□□□ 1.15
UPF3A-209ENST00000492270 OPN1LWP04000 364 aa22.22■■□□□ 1.15
UPF3A-209ENST00000492270 GSNP06396 782 aa22.22■■□□□ 1.15
UPF3A-209ENST00000492270 PSMA4P25789 261 aaKnown RBP22.22■■□□□ 1.15
UPF3A-209ENST00000492270 CHI3L1P36222 383 aaPredicted RBP22.22■■□□□ 1.15
UPF3A-209ENST00000492270 FBXL19-AS1Q494R0 122 aa22.22■■□□□ 1.15
UPF3A-209ENST00000492270 HEPHL1Q6MZM0 1159 aa22.22■■□□□ 1.15
UPF3A-209ENST00000492270 EPGNQ6UW88 154 aa22.22■■□□□ 1.15
UPF3A-209ENST00000492270 C16orf62Q7Z3J2 963 aa22.22■■□□□ 1.15
UPF3A-209ENST00000492270 P4HA3Q7Z4N8 544 aa22.22■■□□□ 1.15
UPF3A-209ENST00000492270 GTPBP8Q8N3Z3 284 aaPredicted RBP22.22■■□□□ 1.15
UPF3A-209ENST00000492270 OR9I1Q8NGQ6 314 aa22.22■■□□□ 1.15
UPF3A-209ENST00000492270 XAGE5Q8WWM1 108 aa22.22■■□□□ 1.15
UPF3A-209ENST00000492270 RNASE6Q93091 150 aaKnown RBP22.22■■□□□ 1.15
UPF3A-209ENST00000492270 ZBTB8AQ96BR9 441 aa22.22■■□□□ 1.15
UPF3A-209ENST00000492270 ZFP3Q96NJ6 502 aa22.22■■□□□ 1.15
UPF3A-209ENST00000492270 PANX1Q96RD7 426 aa22.22■■□□□ 1.15
UPF3A-209ENST00000492270 ZBTB18Q99592 522 aa22.22■■□□□ 1.15
UPF3A-209ENST00000492270 ZNF350Q9GZX5 532 aa22.22■■□□□ 1.15
UPF3A-209ENST00000492270 VIPAS39Q9H9C1 493 aa22.22■■□□□ 1.15
UPF3A-209ENST00000492270 JKAMPQ9P055 326 aa22.22■■□□□ 1.15
UPF3A-209ENST00000492270 CREBBPQ92793 2442 aa22.21■■□□□ 1.15
UPF3A-209ENST00000492270 ANKHD1Q8IWZ3 2542 aaKnown RBP22.21■■□□□ 1.15
UPF3A-209ENST00000492270 CCDC154A6NI56 674 aa22.21■■□□□ 1.15
UPF3A-209ENST00000492270 STX11O75558 287 aa22.21■■□□□ 1.15
UPF3A-209ENST00000492270 SLC22A3O75751 556 aa22.21■■□□□ 1.15
UPF3A-209ENST00000492270 AK1P00568 194 aa22.21■■□□□ 1.15
UPF3A-209ENST00000492270 LINGO3P0C6S8 592 aa22.21■■□□□ 1.15
UPF3A-209ENST00000492270 IL11P20809 199 aa22.21■■□□□ 1.15
UPF3A-209ENST00000492270 KHKP50053 298 aa22.21■■□□□ 1.15
UPF3A-209ENST00000492270 MYBPHQ13203 477 aa22.21■■□□□ 1.15
UPF3A-209ENST00000492270 METTL25Q8N6Q8 603 aa22.21■■□□□ 1.15
UPF3A-209ENST00000492270 GLB1L3Q8NCI6 653 aaPredicted RBP22.21■■□□□ 1.15
UPF3A-209ENST00000492270 ZNF524Q96C55 264 aa22.21■■□□□ 1.15
UPF3A-209ENST00000492270 ARSGQ96EG1 525 aa22.21■■□□□ 1.15
UPF3A-209ENST00000492270 SFXN3Q9BWM7 321 aa22.21■■□□□ 1.15
UPF3A-209ENST00000492270 NMUR2Q9GZQ4 415 aa22.21■■□□□ 1.15
UPF3A-209ENST00000492270 TMEM185BQ9H7F4 350 aa22.21■■□□□ 1.15
UPF3A-209ENST00000492270 EXD2Q9NVH0 621 aa22.21■■□□□ 1.15
UPF3A-209ENST00000492270 ICAM5Q9UMF0 924 aa22.21■■□□□ 1.15
UPF3A-209ENST00000492270 MPDZO75970 2070 aa22.21■■□□□ 1.15
UPF3A-209ENST00000492270 PRAMEF27A3QJZ7 478 aa22.2■■□□□ 1.14
UPF3A-209ENST00000492270 C7orf72A4D263 438 aa22.2■■□□□ 1.14
UPF3A-209ENST00000492270 HMGB1P1B2RPK0 211 aaPredicted RBP22.2■■□□□ 1.14
UPF3A-209ENST00000492270 H3BNH8 94 aa22.2■■□□□ 1.14
UPF3A-209ENST00000492270 GTPBP1O00178 669 aaKnown RBP22.2■■□□□ 1.14
UPF3A-209ENST00000492270 EIF1AYO14602 144 aaKnown RBP22.2■■□□□ 1.14
UPF3A-209ENST00000492270 UBDO15205 165 aa22.2■■□□□ 1.14
UPF3A-209ENST00000492270 SASH3O75995 380 aa22.2■■□□□ 1.14
UPF3A-209ENST00000492270 NUDT14O95848 222 aa22.2■■□□□ 1.14
UPF3A-209ENST00000492270 P2RX1P51575 399 aa22.2■■□□□ 1.14
UPF3A-209ENST00000492270 EEFSECP57772 596 aaKnown RBP22.2■■□□□ 1.14
UPF3A-209ENST00000492270 FOXF1Q12946 379 aa22.2■■□□□ 1.14
UPF3A-209ENST00000492270 PON3Q15166 354 aa22.2■■□□□ 1.14
UPF3A-209ENST00000492270 TOMM34Q15785 309 aaPredicted RBP22.2■■□□□ 1.14
UPF3A-209ENST00000492270 GSTA3Q16772 222 aa22.2■■□□□ 1.14
UPF3A-209ENST00000492270 DNAJC14Q6Y2X3 702 aaPredicted RBP22.2■■□□□ 1.14
UPF3A-209ENST00000492270 RNF130Q86XS8 419 aa22.2■■□□□ 1.14
UPF3A-209ENST00000492270 GOLGA6L1Q8N7Z2 621 aa22.2■■□□□ 1.14
UPF3A-209ENST00000492270 RFWD2Q8NHY2 731 aa22.2■■□□□ 1.14
UPF3A-209ENST00000492270 FNDC9Q8TBE3 224 aa22.2■■□□□ 1.14
UPF3A-209ENST00000492270 DYDC1Q8WWB3 177 aa22.2■■□□□ 1.14
UPF3A-209ENST00000492270 ZNF559Q9BR84 538 aa22.2■■□□□ 1.14
UPF3A-209ENST00000492270 MCCC2Q9HCC0 563 aa22.2■■□□□ 1.14
UPF3A-209ENST00000492270 SDR39U1Q9NRG7 319 aaPredicted RBP22.2■■□□□ 1.14
UPF3A-209ENST00000492270 SLC6A13Q9NSD5 602 aa22.2■■□□□ 1.14
UPF3A-209ENST00000492270 KCNN3Q9UGI6 736 aa22.2■■□□□ 1.14
UPF3A-209ENST00000492270 MYO9AB2RTY4 2548 aa22.19■■□□□ 1.14
UPF3A-209ENST00000492270 TNFSF12-TNFSF13A0A0A6YY99 330 aa22.19■■□□□ 1.14
UPF3A-209ENST00000492270 A0A1W2PNV4 684 aa22.19■■□□□ 1.14
UPF3A-209ENST00000492270 HMGN4O00479 90 aa22.19■■□□□ 1.14
UPF3A-209ENST00000492270 UGT2B17O75795 530 aa22.19■■□□□ 1.14
UPF3A-209ENST00000492270 TNFSF13O75888 250 aa22.19■■□□□ 1.14
UPF3A-209ENST00000492270 PPP2R2AP63151 447 aa22.19■■□□□ 1.14
UPF3A-209ENST00000492270 ZNF141Q15928 474 aa22.19■■□□□ 1.14
UPF3A-209ENST00000492270 MAPK14Q16539 360 aa22.19■■□□□ 1.14
UPF3A-209ENST00000492270 CTU2Q2VPK5 515 aaKnown RBP22.19■■□□□ 1.14
UPF3A-209ENST00000492270 TYW3Q6IPR3 259 aaKnown RBP22.19■■□□□ 1.14
UPF3A-209ENST00000492270 ZNF621Q6ZSS3 439 aa22.19■■□□□ 1.14
UPF3A-209ENST00000492270 HMGN2P46Q86SG4 172 aa22.19■■□□□ 1.14
UPF3A-209ENST00000492270 LUZP2Q86TE4 346 aa22.19■■□□□ 1.14
UPF3A-209ENST00000492270 TMCO5AQ8N6Q1 288 aa22.19■■□□□ 1.14
UPF3A-209ENST00000492270 PNPT1Q8TCS8 783 aaKnown RBP22.19■■□□□ 1.14
UPF3A-209ENST00000492270 ROPN1LQ96C74 230 aa22.19■■□□□ 1.14
UPF3A-209ENST00000492270 EBF4Q9BQW3 602 aa22.19■■□□□ 1.14
UPF3A-209ENST00000492270 ACBD3Q9H3P7 528 aa22.19■■□□□ 1.14
UPF3A-209ENST00000492270 ZIM2Q9NZV7 527 aa22.19■■□□□ 1.14
UPF3A-209ENST00000492270 ANKRD17O75179 2603 aaKnown RBP22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms