RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.35□□□□□ -0.75
CACNA1C-228ENST00000492150 ABHD3Q8WU67 409 aa10.35□□□□□ -0.75
CACNA1C-228ENST00000492150 ZBTB8AQ96BR9 441 aa10.35□□□□□ -0.75
CACNA1C-228ENST00000492150 ELP4Q96EB1 424 aa10.35□□□□□ -0.75
CACNA1C-228ENST00000492150 RNF145Q96MT1 663 aa10.35□□□□□ -0.75
CACNA1C-228ENST00000492150 EBPLQ9BY08 206 aa10.35□□□□□ -0.75
CACNA1C-228ENST00000492150 MRPL46Q9H2W6 279 aaKnown RBP10.35□□□□□ -0.75
CACNA1C-228ENST00000492150 ACSS3Q9H6R3 686 aa10.35□□□□□ -0.75
CACNA1C-228ENST00000492150 MED17Q9NVC6 651 aa10.35□□□□□ -0.75
CACNA1C-228ENST00000492150 DDX18Q9NVP1 670 aaKnown RBP10.35□□□□□ -0.75
CACNA1C-228ENST00000492150 SIRT5Q9NXA8 310 aa10.35□□□□□ -0.75
CACNA1C-228ENST00000492150 TAS2R7Q9NYW3 318 aa10.35□□□□□ -0.75
CACNA1C-228ENST00000492150 MRTO4Q9UKD2 239 aaKnown RBP10.35□□□□□ -0.75
CACNA1C-228ENST00000492150 B3GALT5Q9Y2C3 310 aa10.35□□□□□ -0.75
CACNA1C-228ENST00000492150 UTP11Q9Y3A2 253 aaKnown RBP10.35□□□□□ -0.75
CACNA1C-228ENST00000492150 SNX8Q9Y5X2 465 aa10.35□□□□□ -0.75
CACNA1C-228ENST00000492150 SHISA9B4DS77 424 aa10.34□□□□□ -0.75
CACNA1C-228ENST00000492150 TRIM77I1YAP6 450 aa10.34□□□□□ -0.75
CACNA1C-228ENST00000492150 SLITRK5O94991 958 aa10.34□□□□□ -0.75
CACNA1C-228ENST00000492150 OXSR1O95747 527 aaPredicted RBP10.34□□□□□ -0.75
CACNA1C-228ENST00000492150 ADAP00813 363 aa10.34□□□□□ -0.75
CACNA1C-228ENST00000492150 COL6A2P12110 1019 aa10.34□□□□□ -0.75
CACNA1C-228ENST00000492150 PTNP21246 168 aa10.34□□□□□ -0.75
CACNA1C-228ENST00000492150 SHC1P29353 583 aa10.34□□□□□ -0.75
CACNA1C-228ENST00000492150 SRP14P37108 136 aaKnown RBP10.34□□□□□ -0.75
CACNA1C-228ENST00000492150 MAP3K8P41279 467 aa10.34□□□□□ -0.75
CACNA1C-228ENST00000492150 LIMS1P48059 325 aa10.34□□□□□ -0.75
CACNA1C-228ENST00000492150 CARD18P57730 90 aa10.34□□□□□ -0.75
CACNA1C-228ENST00000492150 C21orf58P58505 322 aa10.34□□□□□ -0.75
CACNA1C-228ENST00000492150 SLC18A2Q05940 514 aa10.34□□□□□ -0.75
CACNA1C-228ENST00000492150 BTKQ06187 659 aa10.34□□□□□ -0.75
CACNA1C-228ENST00000492150 ZNHIT3Q15649 155 aaPredicted RBP10.34□□□□□ -0.75
CACNA1C-228ENST00000492150 ZNF239Q16600 458 aaKnown RBP10.34□□□□□ -0.75
CACNA1C-228ENST00000492150 TMEM201Q5SNT2 666 aa10.34□□□□□ -0.75
CACNA1C-228ENST00000492150 FAM71E1Q6IPT2 247 aa10.34□□□□□ -0.75
CACNA1C-228ENST00000492150 TUSC5Q8IXB3 177 aa10.34□□□□□ -0.75
CACNA1C-228ENST00000492150 CEP112Q8N8E3 955 aa10.34□□□□□ -0.75
CACNA1C-228ENST00000492150 GATSQ8NAP1 163 aa10.34□□□□□ -0.75
CACNA1C-228ENST00000492150 OR4C3Q8NH37 302 aa10.34□□□□□ -0.75
CACNA1C-228ENST00000492150 METTL6Q8TCB7 284 aa10.34□□□□□ -0.75
CACNA1C-228ENST00000492150 RNF128Q8TEB7 428 aa10.34□□□□□ -0.75
CACNA1C-228ENST00000492150 PIK3R3Q92569 461 aa10.34□□□□□ -0.75
CACNA1C-228ENST00000492150 KLHL15Q96M94 604 aa10.34□□□□□ -0.75
CACNA1C-228ENST00000492150 AMDHD1Q96NU7 426 aa10.34□□□□□ -0.75
CACNA1C-228ENST00000492150 ZNF382Q96SR6 550 aa10.34□□□□□ -0.75
CACNA1C-228ENST00000492150 SRXN1Q9BYN0 137 aa10.34□□□□□ -0.75
CACNA1C-228ENST00000492150 BHLHE41Q9C0J9 482 aaPredicted RBP10.34□□□□□ -0.75
CACNA1C-228ENST00000492150 ALG2Q9H553 416 aa10.34□□□□□ -0.75
CACNA1C-228ENST00000492150 C3orf14Q9HBI5 128 aa10.34□□□□□ -0.75
CACNA1C-228ENST00000492150 CISD1Q9NZ45 108 aaKnown RBP10.34□□□□□ -0.75
CACNA1C-228ENST00000492150 METRNQ9UJH8 293 aa10.34□□□□□ -0.75
CACNA1C-228ENST00000492150 GRID1Q9ULK0 1009 aa10.34□□□□□ -0.75
CACNA1C-228ENST00000492150 NFU1Q9UMS0 254 aa10.34□□□□□ -0.75
CACNA1C-228ENST00000492150 PLCE1Q9P212 2302 aa10.34□□□□□ -0.75
CACNA1C-228ENST00000492150 ZNF814B7Z6K7 855 aa10.33□□□□□ -0.76
CACNA1C-228ENST00000492150 NDUFB5O43674 189 aa10.33□□□□□ -0.76
CACNA1C-228ENST00000492150 EFNA2O43921 213 aa10.33□□□□□ -0.76
CACNA1C-228ENST00000492150 KCNH1O95259 989 aa10.33□□□□□ -0.76
CACNA1C-228ENST00000492150 FESP07332 822 aa10.33□□□□□ -0.76
CACNA1C-228ENST00000492150 NGFRP08138 427 aa10.33□□□□□ -0.76
CACNA1C-228ENST00000492150 CSF3P09919 207 aa10.33□□□□□ -0.76
CACNA1C-228ENST00000492150 PABPC4LP0CB38 370 aaKnown RBP10.33□□□□□ -0.76
CACNA1C-228ENST00000492150 HMOX2P30519 316 aa10.33□□□□□ -0.76
CACNA1C-228ENST00000492150 GSTM5P46439 218 aa10.33□□□□□ -0.76
CACNA1C-228ENST00000492150 MANFP55145 182 aaKnown RBP10.33□□□□□ -0.76
CACNA1C-228ENST00000492150 IRX1P78414 480 aaPredicted RBP10.33□□□□□ -0.76
CACNA1C-228ENST00000492150 ITGADQ13349 1161 aa10.33□□□□□ -0.76
CACNA1C-228ENST00000492150 P2RY6Q15077 328 aa10.33□□□□□ -0.76
CACNA1C-228ENST00000492150 GLE1Q53GS7 698 aaKnown RBP10.33□□□□□ -0.76
CACNA1C-228ENST00000492150 ZNF678Q5SXM1 525 aa10.33□□□□□ -0.76
CACNA1C-228ENST00000492150 PDSS1Q5T2R2 415 aa10.33□□□□□ -0.76
CACNA1C-228ENST00000492150 GPRIN3Q6ZVF9 776 aa10.33□□□□□ -0.76
CACNA1C-228ENST00000492150 BHLHA15Q7RTS1 189 aaPredicted RBP10.33□□□□□ -0.76
CACNA1C-228ENST00000492150 ZAR1Q86SH2 424 aa10.33□□□□□ -0.76
CACNA1C-228ENST00000492150 TRABD2AQ86V40 505 aa10.33□□□□□ -0.76
CACNA1C-228ENST00000492150 LILRA2Q8N149 483 aa10.33□□□□□ -0.76
CACNA1C-228ENST00000492150 CDC26Q8NHZ8 85 aa10.33□□□□□ -0.76
CACNA1C-228ENST00000492150 ACTRT2Q8TDY3 377 aa10.33□□□□□ -0.76
CACNA1C-228ENST00000492150 C10orf105Q8TEF2 133 aa10.33□□□□□ -0.76
CACNA1C-228ENST00000492150 FAM168AQ92567 244 aa10.33□□□□□ -0.76
CACNA1C-228ENST00000492150 HOXB13Q92826 284 aaPredicted RBP10.33□□□□□ -0.76
CACNA1C-228ENST00000492150 KISS1RQ969F8 398 aaPredicted RBP10.33□□□□□ -0.76
CACNA1C-228ENST00000492150 MRPL24Q96A35 216 aaKnown RBP10.33□□□□□ -0.76
CACNA1C-228ENST00000492150 POTEKPQ9BYX7 375 aa10.33□□□□□ -0.76
CACNA1C-228ENST00000492150 OCEL1Q9H607 264 aa10.33□□□□□ -0.76
CACNA1C-228ENST00000492150 MANSC1Q9H8J5 431 aa10.33□□□□□ -0.76
CACNA1C-228ENST00000492150 NINJ2Q9NZG7 142 aa10.33□□□□□ -0.76
CACNA1C-228ENST00000492150 KLHL13Q9P2N7 655 aa10.33□□□□□ -0.76
CACNA1C-228ENST00000492150 TIMM22Q9Y584 194 aa10.33□□□□□ -0.76
CACNA1C-228ENST00000492150 SERTM1A2A2V5 107 aa10.32□□□□□ -0.76
CACNA1C-228ENST00000492150 TTC36A6NLP5 189 aa10.32□□□□□ -0.76
CACNA1C-228ENST00000492150 SUPT7LO94864 414 aa10.32□□□□□ -0.76
CACNA1C-228ENST00000492150 NKX2-2O95096 273 aa10.32□□□□□ -0.76
CACNA1C-228ENST00000492150 YES1P07947 543 aa10.32□□□□□ -0.76
CACNA1C-228ENST00000492150 IFI6P09912 130 aa10.32□□□□□ -0.76
CACNA1C-228ENST00000492150 LINGO3P0C6S8 592 aa10.32□□□□□ -0.76
CACNA1C-228ENST00000492150 ARAFP10398 606 aa10.32□□□□□ -0.76
CACNA1C-228ENST00000492150 PYGBP11216 843 aa10.32□□□□□ -0.76
CACNA1C-228ENST00000492150 ME2P23368 584 aa10.32□□□□□ -0.76
CACNA1C-228ENST00000492150 NTSP30990 170 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms