RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 FIGNL1Q6PIW4 674 aa7.49□□□□□ -1.21
SMARCB1-207ENST00000491967 CBLN3Q6UW01 205 aa7.49□□□□□ -1.21
SMARCB1-207ENST00000491967 BIVMQ86UB2 503 aa7.49□□□□□ -1.21
SMARCB1-207ENST00000491967 MREGQ8N565 214 aa7.49□□□□□ -1.21
SMARCB1-207ENST00000491967 OR56A1Q8NGH5 318 aa7.49□□□□□ -1.21
SMARCB1-207ENST00000491967 B4GALNT2Q8NHY0 566 aa7.49□□□□□ -1.21
SMARCB1-207ENST00000491967 PPP1R14CQ8TAE6 165 aa7.49□□□□□ -1.21
SMARCB1-207ENST00000491967 MIPOL1Q8TD10 442 aa7.49□□□□□ -1.21
SMARCB1-207ENST00000491967 SFXN5Q8TD22 340 aa7.49□□□□□ -1.21
SMARCB1-207ENST00000491967 GPR119Q8TDV5 335 aa7.49□□□□□ -1.21
SMARCB1-207ENST00000491967 NUDT8Q8WV74 236 aa7.49□□□□□ -1.21
SMARCB1-207ENST00000491967 PIGTQ969N2 578 aa7.49□□□□□ -1.21
SMARCB1-207ENST00000491967 MOAP1Q96BY2 351 aa7.49□□□□□ -1.21
SMARCB1-207ENST00000491967 ARSGQ96EG1 525 aa7.49□□□□□ -1.21
SMARCB1-207ENST00000491967 TMEM204Q9BSN7 226 aa7.49□□□□□ -1.21
SMARCB1-207ENST00000491967 ACTRT3Q9BYD9 372 aa7.49□□□□□ -1.21
SMARCB1-207ENST00000491967 BHLHE41Q9C0J9 482 aaPredicted RBP7.49□□□□□ -1.21
SMARCB1-207ENST00000491967 NMUR2Q9GZQ4 415 aa7.49□□□□□ -1.21
SMARCB1-207ENST00000491967 GSX1Q9H4S2 264 aaPredicted RBP7.49□□□□□ -1.21
SMARCB1-207ENST00000491967 CXorf36Q9H7Y0 433 aa7.49□□□□□ -1.21
SMARCB1-207ENST00000491967 ZCCHC3Q9NUD5 404 aaKnown RBP7.49□□□□□ -1.21
SMARCB1-207ENST00000491967 C6orf203Q9P0P8 240 aaPredicted RBP7.49□□□□□ -1.21
SMARCB1-207ENST00000491967 GIMAP2Q9UG22 337 aa7.49□□□□□ -1.21
SMARCB1-207ENST00000491967 HAO1Q9UJM8 370 aa7.49□□□□□ -1.21
SMARCB1-207ENST00000491967 PROCRQ9UNN8 238 aa7.49□□□□□ -1.21
SMARCB1-207ENST00000491967 EIF3LQ9Y262 564 aaKnown RBP7.49□□□□□ -1.21
SMARCB1-207ENST00000491967 KCNE3Q9Y6H6 103 aa7.49□□□□□ -1.21
SMARCB1-207ENST00000491967 VPS13CQ709C8 3753 aa7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 JMJD1CQ15652 2540 aa7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 TLDC2A0PJX2 215 aa7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 EIF1AYO14602 144 aaKnown RBP7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 ANKRD28O15084 1053 aa7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 OIP5O43482 229 aa7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 TMCC2O75069 709 aa7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 PEX11AO75192 247 aa7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 SLU7O95391 586 aaKnown RBP7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 KRT16P08779 473 aa7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 PSMB1P20618 241 aaKnown RBP7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 FPR1P21462 350 aa7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 SHC1P29353 583 aa7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 CPOXP36551 454 aa7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 EIF1AXP47813 144 aaKnown RBP7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 RFX3P48380 749 aa7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 P2RX1P51575 399 aa7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 ATP12AP54707 1039 aa7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 HBA1P69905 142 aa7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 NKX6-1P78426 367 aaPredicted RBP7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 LASP1Q14847 261 aaKnown RBP7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 POU4F3Q15319 338 aa7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 ZNF141Q15928 474 aa7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 ACKR1Q16570 336 aa7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 SGCBQ16585 318 aa7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 LSM12Q3MHD2 195 aaKnown RBP7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 ATP6AP1LQ52LC2 224 aa7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 DCST2Q5T1A1 773 aa7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 HEPHL1Q6MZM0 1159 aa7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 EMBQ6PCB8 327 aa7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 ZCCHC23Q6ZST2 131 aa7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 BEND4Q6ZU67 534 aa7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 GALNT10Q86SR1 603 aa7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 DDIASQ8IXT1 998 aa7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 LRRC34Q8IZ02 419 aa7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 LILRA2Q8N149 483 aa7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 GABRG1Q8N1C3 465 aa7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 KRTCAP2Q8N6L1 136 aa7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 COX18Q8N8Q8 333 aa7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 TOR1AIP2Q8NFQ8 470 aa7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 OR8J2Q8NGG1 315 aa7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 OR2V1Q8NHB1 315 aa7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 FBXO30Q8TB52 745 aa7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 RNF128Q8TEB7 428 aa7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 OIT3Q8WWZ8 545 aa7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 OSTF1Q92882 214 aa7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 CDS1Q92903 461 aa7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 C18orf12Q96KH6 178 aa7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 MRGPRX4Q96LA9 322 aa7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 KLHL15Q96M94 604 aa7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 RNF145Q96MT1 663 aa7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 HS3ST6Q96QI5 342 aa7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 SDF2Q99470 211 aa7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 PRPF18Q99633 342 aaKnown RBP7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 MED18Q9BUE0 208 aa7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 SERHL2Q9H4I8 314 aa7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 ZNF395Q9H8N7 513 aaPredicted RBP7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 SSU72Q9NP77 194 aaKnown RBP7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 ATAD3AQ9NVI7 634 aa7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 KCNE5Q9UJ90 142 aa7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 ING1Q9UK53 422 aaPredicted RBP7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 MCTS1Q9ULC4 181 aaKnown RBP7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 VDAC3Q9Y277 283 aa7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 GPR52Q9Y2T5 361 aa7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 EMC9Q9Y3B6 208 aa7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 FIS1Q9Y3D6 152 aa7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 DTNAQ9Y4J8 743 aa7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 GPC6Q9Y625 555 aaPredicted RBP7.48□□□□□ -1.21
SMARCB1-207ENST00000491967 RNASET2O00584 256 aaKnown RBP7.47□□□□□ -1.21
SMARCB1-207ENST00000491967 SCDO00767 359 aa7.47□□□□□ -1.21
SMARCB1-207ENST00000491967 ZNF195O14628 629 aa7.47□□□□□ -1.21
SMARCB1-207ENST00000491967 TNFSF11O14788 317 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms