RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 C14orf178Q8N769 122 aaPredicted RBP2.81□□□□□ -1.96
VTA1-204ENST00000491881 FADS6Q8N9I5 356 aa2.81□□□□□ -1.96
VTA1-204ENST00000491881 OR10T2Q8NGX3 314 aa2.81□□□□□ -1.96
VTA1-204ENST00000491881 NANPQ8TBE9 248 aa2.81□□□□□ -1.96
VTA1-204ENST00000491881 ANKRD49Q8WVL7 239 aa2.81□□□□□ -1.96
VTA1-204ENST00000491881 MYLPFQ96A32 169 aa2.81□□□□□ -1.96
VTA1-204ENST00000491881 NOL4LQ96MY1 436 aaPredicted RBP2.81□□□□□ -1.96
VTA1-204ENST00000491881 ZIM3Q96PE6 472 aa2.81□□□□□ -1.96
VTA1-204ENST00000491881 CNPY3Q9BT09 278 aa2.81□□□□□ -1.96
VTA1-204ENST00000491881 TEX13BQ9BXU2 312 aa2.81□□□□□ -1.96
VTA1-204ENST00000491881 PPDPFQ9H3Y8 114 aa2.81□□□□□ -1.96
VTA1-204ENST00000491881 RHOJQ9H4E5 214 aa2.81□□□□□ -1.96
VTA1-204ENST00000491881 ZNF702PQ9H963 129 aa2.81□□□□□ -1.96
VTA1-204ENST00000491881 FARSBQ9NSD9 589 aaKnown RBP2.81□□□□□ -1.96
VTA1-204ENST00000491881 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.81□□□□□ -1.96
VTA1-204ENST00000491881 ABCG2Q9UNQ0 655 aa2.81□□□□□ -1.96
VTA1-204ENST00000491881 SMC3Q9UQE7 1217 aa2.81□□□□□ -1.96
VTA1-204ENST00000491881 CA5BQ9Y2D0 317 aa2.81□□□□□ -1.96
VTA1-204ENST00000491881 ZNF256Q9Y2P7 627 aaPredicted RBP2.81□□□□□ -1.96
VTA1-204ENST00000491881 MAD1L1Q9Y6D9 718 aa2.81□□□□□ -1.96
VTA1-204ENST00000491881 IQSEC2Q5JU85 1478 aa2.81□□□□□ -1.96
VTA1-204ENST00000491881 ABCA7Q8IZY2 2146 aa2.8□□□□□ -1.96
VTA1-204ENST00000491881 UNC13AQ9UPW8 1703 aa2.8□□□□□ -1.96
VTA1-204ENST00000491881 NISCHQ9Y2I1 1504 aa2.8□□□□□ -1.96
VTA1-204ENST00000491881 SNAPC4Q5SXM2 1469 aa2.8□□□□□ -1.96
VTA1-204ENST00000491881 TNRQ92752 1358 aa2.8□□□□□ -1.96
VTA1-204ENST00000491881 B4DXG7 233 aa2.8□□□□□ -1.96
VTA1-204ENST00000491881 K7EPI3 171 aa2.8□□□□□ -1.96
VTA1-204ENST00000491881 FCN1O00602 326 aa2.8□□□□□ -1.96
VTA1-204ENST00000491881 OPN1LWP04000 364 aa2.8□□□□□ -1.96
VTA1-204ENST00000491881 HSPB1P04792 205 aaKnown RBP2.8□□□□□ -1.96
VTA1-204ENST00000491881 EPB41P11171 864 aaKnown RBP2.8□□□□□ -1.96
VTA1-204ENST00000491881 DESP17661 470 aa2.8□□□□□ -1.96
VTA1-204ENST00000491881 CALB2P22676 271 aa2.8□□□□□ -1.96
VTA1-204ENST00000491881 EPHX2P34913 555 aa2.8□□□□□ -1.96
VTA1-204ENST00000491881 GCKP35557 465 aa2.8□□□□□ -1.96
VTA1-204ENST00000491881 EFNA3P52797 238 aa2.8□□□□□ -1.96
VTA1-204ENST00000491881 STX17P56962 302 aa2.8□□□□□ -1.96
VTA1-204ENST00000491881 MRPS11P82912 194 aaKnown RBP2.8□□□□□ -1.96
VTA1-204ENST00000491881 OTUD4Q01804 1114 aaKnown RBP2.8□□□□□ -1.96
VTA1-204ENST00000491881 NDUFA9Q16795 377 aa2.8□□□□□ -1.96
VTA1-204ENST00000491881 USH1GQ495M9 461 aa2.8□□□□□ -1.96
VTA1-204ENST00000491881 OR2B11Q5JQS5 317 aa2.8□□□□□ -1.96
VTA1-204ENST00000491881 WSCD1Q658N2 575 aa2.8□□□□□ -1.96
VTA1-204ENST00000491881 BLOC1S2Q6QNY1 142 aa2.8□□□□□ -1.96
VTA1-204ENST00000491881 KRTAP5-5Q701N2 237 aaPredicted RBP2.8□□□□□ -1.96
VTA1-204ENST00000491881 TRPM8Q7Z2W7 1104 aa2.8□□□□□ -1.96
VTA1-204ENST00000491881 TMEM179BQ7Z7N9 219 aa2.8□□□□□ -1.96
VTA1-204ENST00000491881 OR2L5Q8NG80 312 aa2.8□□□□□ -1.96
VTA1-204ENST00000491881 OR10H4Q8NGA5 316 aa2.8□□□□□ -1.96
VTA1-204ENST00000491881 AENQ8WTP8 325 aaKnown RBP2.8□□□□□ -1.96
VTA1-204ENST00000491881 FGGYQ96C11 551 aa2.8□□□□□ -1.96
VTA1-204ENST00000491881 PHYHIPLQ96FC7 376 aa2.8□□□□□ -1.96
VTA1-204ENST00000491881 OR5B2Q96R09 309 aa2.8□□□□□ -1.96
VTA1-204ENST00000491881 NMUR2Q9GZQ4 415 aa2.8□□□□□ -1.96
VTA1-204ENST00000491881 EHD1Q9H4M9 534 aa2.8□□□□□ -1.96
VTA1-204ENST00000491881 PTGES2Q9H7Z7 377 aa2.8□□□□□ -1.96
VTA1-204ENST00000491881 ISG20L2Q9H9L3 353 aaKnown RBP2.8□□□□□ -1.96
VTA1-204ENST00000491881 NANSQ9NR45 359 aa2.8□□□□□ -1.96
VTA1-204ENST00000491881 PAK1IP1Q9NWT1 392 aaPredicted RBP2.8□□□□□ -1.96
VTA1-204ENST00000491881 IL17CQ9P0M4 197 aa2.8□□□□□ -1.96
VTA1-204ENST00000491881 TMEM9Q9P0T7 183 aa2.8□□□□□ -1.96
VTA1-204ENST00000491881 OR1A1Q9P1Q5 309 aa2.8□□□□□ -1.96
VTA1-204ENST00000491881 ISY1Q9ULR0 285 aaKnown RBP2.8□□□□□ -1.96
VTA1-204ENST00000491881 OARD1Q9Y530 152 aa2.8□□□□□ -1.96
VTA1-204ENST00000491881 MAB21L2Q9Y586 359 aa2.8□□□□□ -1.96
VTA1-204ENST00000491881 AP1M2Q9Y6Q5 423 aa2.8□□□□□ -1.96
VTA1-204ENST00000491881 SF3B1O75533 1304 aaKnown RBP eCLIP2.79□□□□□ -1.96
VTA1-204ENST00000491881 A8MUI8 341 aa2.79□□□□□ -1.96
VTA1-204ENST00000491881 H3BMQ9 156 aa2.79□□□□□ -1.96
VTA1-204ENST00000491881 K7ENP7 123 aa2.79□□□□□ -1.96
VTA1-204ENST00000491881 CTAGE5O15320 804 aa2.79□□□□□ -1.96
VTA1-204ENST00000491881 EFNA2O43921 213 aa2.79□□□□□ -1.96
VTA1-204ENST00000491881 SMPD2O60906 423 aa2.79□□□□□ -1.96
VTA1-204ENST00000491881 NOL3O60936 208 aaKnown RBP2.79□□□□□ -1.96
VTA1-204ENST00000491881 LYPLA1O75608 230 aaPredicted RBP2.79□□□□□ -1.96
VTA1-204ENST00000491881 IDH1O75874 414 aaKnown RBP2.79□□□□□ -1.96
VTA1-204ENST00000491881 IGHV3-23P01764 117 aa2.79□□□□□ -1.96
VTA1-204ENST00000491881 HEXBP07686 556 aa2.79□□□□□ -1.96
VTA1-204ENST00000491881 ASNSP08243 561 aa2.79□□□□□ -1.96
VTA1-204ENST00000491881 NTSP30990 170 aa2.79□□□□□ -1.96
VTA1-204ENST00000491881 STARP49675 285 aa2.79□□□□□ -1.96
VTA1-204ENST00000491881 ACADVLP49748 655 aa2.79□□□□□ -1.96
VTA1-204ENST00000491881 RIPPLY1Q0D2K3 151 aa2.79□□□□□ -1.96
VTA1-204ENST00000491881 SLC10A7Q0GE19 358 aa2.79□□□□□ -1.96
VTA1-204ENST00000491881 ZNF544Q6NX49 715 aa2.79□□□□□ -1.96
VTA1-204ENST00000491881 FAHD2BQ6P2I3 314 aaPredicted RBP2.79□□□□□ -1.96
VTA1-204ENST00000491881 CXCL17Q6UXB2 119 aa2.79□□□□□ -1.96
VTA1-204ENST00000491881 KIAA1328Q86T90 577 aa2.79□□□□□ -1.96
VTA1-204ENST00000491881 LINC01561Q8N1V8 128 aa2.79□□□□□ -1.96
VTA1-204ENST00000491881 MTURNQ8N3F0 131 aa2.79□□□□□ -1.96
VTA1-204ENST00000491881 OR2A12Q8NGT7 310 aa2.79□□□□□ -1.96
VTA1-204ENST00000491881 ZNF564Q8TBZ8 553 aaPredicted RBP2.79□□□□□ -1.96
VTA1-204ENST00000491881 NEIL2Q969S2 332 aa2.79□□□□□ -1.96
VTA1-204ENST00000491881 HAVCR1Q96D42 359 aa2.79□□□□□ -1.96
VTA1-204ENST00000491881 FAHD2AQ96GK7 314 aa2.79□□□□□ -1.96
VTA1-204ENST00000491881 MS4A14Q96JA4 679 aa2.79□□□□□ -1.96
VTA1-204ENST00000491881 C4orf36Q96KX1 117 aa2.79□□□□□ -1.96
VTA1-204ENST00000491881 TPPP3Q9BW30 176 aa2.79□□□□□ -1.96
VTA1-204ENST00000491881 LIN28AQ9H9Z2 209 aaKnown RBP2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms