RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 GMEB1Q9Y692 573 aa14.74□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 DNAJC13O75165 2243 aa14.74□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 FREM3P0C091 2139 aa14.74□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 OR2M5A3KFT3 312 aa14.73□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 LINC01387J3KSC0 135 aa14.73□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 CSTAP01040 98 aa14.73□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 BMP2P12643 396 aa14.73□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 CPN1P15169 458 aa14.73□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 ZNF17P17021 662 aa14.73□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 POU3F2P20265 443 aaPredicted RBP14.73□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 ADSLP30566 484 aaPredicted RBP14.73□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 STARP49675 285 aa14.73□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 CRISP3P54108 245 aa14.73□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 NUP107P57740 925 aa14.73□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 GNGT1P63211 74 aa14.73□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 PMPCAQ10713 525 aa14.73□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 NFYCQ13952 458 aa14.73□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 SF3B4Q15427 424 aaKnown RBP eCLIP14.73□□□□□ -0.052e-7■■□□□ 13
MSH5-SAPCD1-206ENST00000491552 MAPRE2Q15555 327 aa14.73□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 MAPK11Q15759 364 aa14.73□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 TMEM44Q2T9K0 475 aa14.73□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 PLPPR5Q32ZL2 321 aa14.73□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 ACSF3Q4G176 576 aaPredicted RBP14.73□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 EIF3MQ7L2H7 374 aaKnown RBP14.73□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 OR5M1Q8NGP8 315 aa14.73□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 RND1Q92730 232 aa14.73□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 PMM1Q92871 262 aa14.73□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 ZBTB8AQ96BR9 441 aa14.73□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 TMEM19Q96HH6 336 aa14.73□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 ELAC2Q9BQ52 826 aaKnown RBP14.73□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 KLHDC3Q9BQ90 382 aa14.73□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 CPPED1Q9BRF8 314 aaPredicted RBP14.73□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 TTYH2Q9BSA4 534 aa14.73□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 FAM107BQ9H098 131 aa14.73□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 QRSL1Q9H0R6 528 aaKnown RBP14.73□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 A4GALTQ9NPC4 353 aa14.73□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.73□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 ICAM5Q9UMF0 924 aa14.73□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 SLC35A3Q9Y2D2 325 aa14.73□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 CAPN7Q9Y6W3 813 aa14.73□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 A1L4Q6 167 aa14.72□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 C7orf72A4D263 438 aa14.72□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 GMNCA6NCL1 334 aa14.72□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 AGAP5A6NIR3 686 aa14.72□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 EVPLLA8MZ36 301 aa14.72□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 SHISA8B8ZZ34 492 aa14.72□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 H0Y3Z8 333 aa14.72□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 H3BML4 177 aa14.72□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 CYP7B1O75881 506 aa14.72□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 NUDT14O95848 222 aa14.72□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 TFPTP0C1Z6 253 aa14.72□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 GLI4P10075 376 aa14.72□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 PEPDP12955 493 aa14.72□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 ZNF708P17019 499 aa14.72□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 AGAP20933 346 aa14.72□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 DRD4P21917 467 aa14.72□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 RPS4Y1P22090 263 aaKnown RBP14.72□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 CCR4P51679 360 aa14.72□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 CLDN18P56856 261 aa14.72□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 SRYQ05066 204 aa14.72□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 SKP2Q13309 424 aa14.72□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 CBFBQ13951 182 aa14.72□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 GNA13Q14344 377 aa14.72□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 BCL2A1Q16548 175 aa14.72□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 RUNDC3AQ59EK9 446 aa14.72□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 GCNT6Q5T4J0 391 aa14.72□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 XKRXQ6PP77 449 aa14.72□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 HMGN2P46Q86SG4 172 aa14.72□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 GTPBP8Q8N3Z3 284 aaPredicted RBP14.72□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 TOR1AIP2Q8NFQ8 470 aa14.72□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 OR5W2Q8NH69 310 aa14.72□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 ZPLD1Q8TCW7 415 aa14.72□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 SLC38A5Q8WUX1 472 aa14.72□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 ZG16BQ96DA0 208 aa14.72□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 CGREF1Q99674 301 aa14.72□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 LAT2Q9GZY6 243 aa14.72□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 MTHFD2LQ9H903 347 aaPredicted RBP14.72□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 COQ3Q9NZJ6 369 aa14.72□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 ZNF337Q9Y3M9 751 aa14.72□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 FLNCQ14315 2725 aa14.72□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 DSPPQ9NZW4 1301 aa14.71□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 BBIP1A8MTZ0 92 aa14.71□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 FBP2O00757 339 aa14.71□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 SLC22A2O15244 555 aa14.71□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 CCDC22O60826 627 aa14.71□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 EPPINO95925 133 aa14.71□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 DBIP07108 87 aaKnown RBP14.71□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 NUDT7P0C024 238 aa14.71□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 LINGO3P0C6S8 592 aa14.71□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 UBTFL6P0CB48 400 aaPredicted RBP14.71□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 PGM1P36871 562 aa14.71□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 KCNJ10P78508 379 aa14.71□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 MMEL1Q495T6 779 aa14.71□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 REP15Q6BDI9 236 aa14.71□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 CPLX4Q7Z7G2 160 aa14.71□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 SNX32Q86XE0 403 aa14.71□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 LACC1Q8IV20 430 aa14.71□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 CMIPQ8IY22 773 aa14.71□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 PEX5LQ8IYB4 626 aa14.71□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 FAM71CQ8NEG0 241 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms