RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 CENPHQ9H3R5 247 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 TMEM185BQ9H7F4 350 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 PLEKHF2Q9H8W4 249 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 SSU72Q9NP77 194 aaKnown RBP7.42□□□□□ -1.22
LSM2-213ENST00000491421 GPATCH2Q9NW75 528 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 PAQR5Q9NXK6 330 aaPredicted RBP7.42□□□□□ -1.22
LSM2-213ENST00000491421 KLHL28Q9NXS3 571 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 ASIC5Q9NY37 505 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 ELOVL5Q9NYP7 299 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 MCTS1Q9ULC4 181 aaKnown RBP7.42□□□□□ -1.22
LSM2-213ENST00000491421 PROCRQ9UNN8 238 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 EMC9Q9Y3B6 208 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 KCNE3Q9Y6H6 103 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 ARHGAP21Q5T5U3 1957 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 ITPR3Q14573 2671 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 NPIPA5A0A0B4J1W7 369 aa7.41□□□□□ -1.22
LSM2-213ENST00000491421 NPIPA7E9PJI5 369 aa7.41□□□□□ -1.22
LSM2-213ENST00000491421 C16orf97H3BN30 126 aa7.41□□□□□ -1.22
LSM2-213ENST00000491421 GTPBP1O00178 669 aaKnown RBP7.41□□□□□ -1.22
LSM2-213ENST00000491421 TNFSF11O14788 317 aa7.41□□□□□ -1.22
LSM2-213ENST00000491421 ADAMDEC1O15204 470 aa7.41□□□□□ -1.22
LSM2-213ENST00000491421 TM9SF1O15321 606 aa7.41□□□□□ -1.22
LSM2-213ENST00000491421 CXCL13O43927 109 aa7.41□□□□□ -1.22
LSM2-213ENST00000491421 SNUPNO95149 360 aaKnown RBP7.41□□□□□ -1.22
LSM2-213ENST00000491421 NUDT14O95848 222 aa7.41□□□□□ -1.22
LSM2-213ENST00000491421 LINGO3P0C6S8 592 aa7.41□□□□□ -1.22
LSM2-213ENST00000491421 NPIPA8P0DM63 369 aa7.41□□□□□ -1.22
LSM2-213ENST00000491421 PSMA4P25789 261 aaKnown RBP7.41□□□□□ -1.22
LSM2-213ENST00000491421 CCKARP32238 428 aa7.41□□□□□ -1.22
LSM2-213ENST00000491421 EIF1P41567 113 aaKnown RBP7.41□□□□□ -1.22
LSM2-213ENST00000491421 CTBP2P56545 445 aa7.41□□□□□ -1.22
LSM2-213ENST00000491421 CLDN8P56748 225 aa7.41□□□□□ -1.22
LSM2-213ENST00000491421 C21orf58P58505 322 aa7.41□□□□□ -1.22
LSM2-213ENST00000491421 HBA1P69905 142 aa7.41□□□□□ -1.22
LSM2-213ENST00000491421 FOXF1Q12946 379 aa7.41□□□□□ -1.22
LSM2-213ENST00000491421 EXOC3L2Q2M3D2 409 aa7.41□□□□□ -1.22
LSM2-213ENST00000491421 SMU1Q2TAY7 513 aa7.41□□□□□ -1.22
LSM2-213ENST00000491421 CTU2Q2VPK5 515 aaKnown RBP7.41□□□□□ -1.22
LSM2-213ENST00000491421 DEFB113Q30KQ7 82 aa7.41□□□□□ -1.22
LSM2-213ENST00000491421 KLHL26Q53HC5 615 aa7.41□□□□□ -1.22
LSM2-213ENST00000491421 CEP85LQ5SZL2 805 aa7.41□□□□□ -1.22
LSM2-213ENST00000491421 HBMQ6B0K9 141 aa7.41□□□□□ -1.22
LSM2-213ENST00000491421 OR4F3Q6IEY1 312 aa7.41□□□□□ -1.22
LSM2-213ENST00000491421 ESPNLQ6ZVH7 1005 aa7.41□□□□□ -1.22
LSM2-213ENST00000491421 TGIF2LYQ8IUE0 185 aa7.41□□□□□ -1.22
LSM2-213ENST00000491421 ZNF614Q8N883 585 aa7.41□□□□□ -1.22
LSM2-213ENST00000491421 ZNF610Q8N9Z0 462 aa7.41□□□□□ -1.22
LSM2-213ENST00000491421 OR5D16Q8NGK9 328 aa7.41□□□□□ -1.22
LSM2-213ENST00000491421 OR6K3Q8NGY3 331 aa7.41□□□□□ -1.22
LSM2-213ENST00000491421 OR2V1Q8NHB1 315 aa7.41□□□□□ -1.22
LSM2-213ENST00000491421 POC1BQ8TC44 478 aa7.41□□□□□ -1.22
LSM2-213ENST00000491421 GMPPAQ96IJ6 420 aaPredicted RBP7.41□□□□□ -1.22
LSM2-213ENST00000491421 ADGRG7Q96K78 797 aa7.41□□□□□ -1.22
LSM2-213ENST00000491421 WFIKKN1Q96NZ8 548 aa7.41□□□□□ -1.22
LSM2-213ENST00000491421 OR7D2Q96RA2 312 aa7.41□□□□□ -1.22
LSM2-213ENST00000491421 KLHDC3Q9BQ90 382 aa7.41□□□□□ -1.22
LSM2-213ENST00000491421 ZNF395Q9H8N7 513 aaPredicted RBP7.41□□□□□ -1.22
LSM2-213ENST00000491421 AKTIPQ9H8T0 292 aa7.41□□□□□ -1.22
LSM2-213ENST00000491421 ZNF226Q9NYT6 803 aa7.41□□□□□ -1.22
LSM2-213ENST00000491421 C6orf203Q9P0P8 240 aaPredicted RBP7.41□□□□□ -1.22
LSM2-213ENST00000491421 CLEC4AQ9UMR7 237 aa7.41□□□□□ -1.22
LSM2-213ENST00000491421 CARD8Q9Y2G2 431 aa7.41□□□□□ -1.22
LSM2-213ENST00000491421 RAP2CQ9Y3L5 183 aa7.41□□□□□ -1.22
LSM2-213ENST00000491421 SETD2Q9BYW2 2564 aaPredicted RBP7.41□□□□□ -1.22
LSM2-213ENST00000491421 FREM3P0C091 2139 aa7.4□□□□□ -1.22
LSM2-213ENST00000491421 A0A0J9YW62 118 aa7.4□□□□□ -1.22
LSM2-213ENST00000491421 RNF103-CHMP3A0A140T963 221 aa7.4□□□□□ -1.22
LSM2-213ENST00000491421 A0A1W2PPR1 153 aa7.4□□□□□ -1.22
LSM2-213ENST00000491421 NPIPB9F8W1W9 429 aa7.4□□□□□ -1.22
LSM2-213ENST00000491421 RNASET2O00584 256 aaKnown RBP7.4□□□□□ -1.22
LSM2-213ENST00000491421 OIP5O43482 229 aa7.4□□□□□ -1.22
LSM2-213ENST00000491421 ZNF500O60304 480 aaPredicted RBP7.4□□□□□ -1.22
LSM2-213ENST00000491421 SS18L1O75177 396 aaPredicted RBP7.4□□□□□ -1.22
LSM2-213ENST00000491421 DHRS4L1P0CG22 281 aa7.4□□□□□ -1.22
LSM2-213ENST00000491421 KLK2P20151 261 aa7.4□□□□□ -1.22
LSM2-213ENST00000491421 IL11P20809 199 aa7.4□□□□□ -1.22
LSM2-213ENST00000491421 BGNP21810 368 aa7.4□□□□□ -1.22
LSM2-213ENST00000491421 ELK4P28324 431 aa7.4□□□□□ -1.22
LSM2-213ENST00000491421 SFTPDP35247 375 aa7.4□□□□□ -1.22
LSM2-213ENST00000491421 SLC1A6P48664 564 aa7.4□□□□□ -1.22
LSM2-213ENST00000491421 RPL14P50914 215 aaKnown RBP7.4□□□□□ -1.22
LSM2-213ENST00000491421 P2RX1P51575 399 aa7.4□□□□□ -1.22
LSM2-213ENST00000491421 ATP12AP54707 1039 aa7.4□□□□□ -1.22
LSM2-213ENST00000491421 SUMO3P55854 103 aaPredicted RBP7.4□□□□□ -1.22
LSM2-213ENST00000491421 CARD18P57730 90 aa7.4□□□□□ -1.22
LSM2-213ENST00000491421 RPS26P62854 115 aaKnown RBP7.4□□□□□ -1.22
LSM2-213ENST00000491421 NDUFAF6Q330K2 333 aa7.4□□□□□ -1.22
LSM2-213ENST00000491421 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.4□□□□□ -1.22
LSM2-213ENST00000491421 CBLN3Q6UW01 205 aa7.4□□□□□ -1.22
LSM2-213ENST00000491421 ZNF550Q7Z398 422 aa7.4□□□□□ -1.22
LSM2-213ENST00000491421 CLECL1Q8IZS7 167 aa7.4□□□□□ -1.22
LSM2-213ENST00000491421 KIRREL3Q8IZU9 778 aa7.4□□□□□ -1.22
LSM2-213ENST00000491421 LILRA2Q8N149 483 aa7.4□□□□□ -1.22
LSM2-213ENST00000491421 CLEC4FQ8N1N0 589 aa7.4□□□□□ -1.22
LSM2-213ENST00000491421 TMCO5AQ8N6Q1 288 aa7.4□□□□□ -1.22
LSM2-213ENST00000491421 OR4A15Q8NGL6 344 aa7.4□□□□□ -1.22
LSM2-213ENST00000491421 FBXO27Q8NI29 283 aa7.4□□□□□ -1.22
LSM2-213ENST00000491421 OSTF1Q92882 214 aa7.4□□□□□ -1.22
LSM2-213ENST00000491421 ZBTB9Q96C00 473 aa7.4□□□□□ -1.22
LSM2-213ENST00000491421 PIK3IP1Q96FE7 263 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms