RNA–Protein interactions for RNA: ENST00000491292.5

ERCC3-208, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, human

TSL 2

Gene ERCC3, Length 4,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERCC3-208	ENST00000491292	EXO5	Q9H790	373 aa		9.18	□□□□□ -0.94
ERCC3-208	ENST00000491292	DLL4	Q9NR61	685 aa		9.18	□□□□□ -0.94
ERCC3-208	ENST00000491292	AKAP7	Q9P0M2	348 aa	Predicted RBP	9.18	□□□□□ -0.94
ERCC3-208	ENST00000491292	KLK11	Q9UBX7	282 aa		9.18	□□□□□ -0.94
ERCC3-208	ENST00000491292	KRT33A	O76009	404 aa		9.18	□□□□□ -0.94
ERCC3-208	ENST00000491292	MAS1	P04201	325 aa		9.18	□□□□□ -0.94
ERCC3-208	ENST00000491292	PSMB1	P20618	241 aa	Known RBP	9.18	□□□□□ -0.94
ERCC3-208	ENST00000491292	PRPH2	P23942	346 aa		9.18	□□□□□ -0.94
ERCC3-208	ENST00000491292	ARHGAP15	Q53QZ3	475 aa		9.18	□□□□□ -0.94
ERCC3-208	ENST00000491292	ARTN	Q5T4W7	220 aa		9.18	□□□□□ -0.94
ERCC3-208	ENST00000491292	ZCCHC12	Q6PEW1	402 aa		9.18	□□□□□ -0.94
ERCC3-208	ENST00000491292	FIGNL1	Q6PIW4	674 aa		9.18	□□□□□ -0.94
ERCC3-208	ENST00000491292	NHLRC1	Q6VVB1	395 aa		9.18	□□□□□ -0.94
ERCC3-208	ENST00000491292	TMEM91	Q6ZNR0	172 aa		9.18	□□□□□ -0.94
ERCC3-208	ENST00000491292		Q6ZTK2	550 aa		9.18	□□□□□ -0.94
ERCC3-208	ENST00000491292	CPA6	Q8N4T0	437 aa		9.18	□□□□□ -0.94
ERCC3-208	ENST00000491292	ESX1	Q8N693	406 aa		9.18	□□□□□ -0.94
ERCC3-208	ENST00000491292	AMER3	Q8N944	861 aa		9.18	□□□□□ -0.94
ERCC3-208	ENST00000491292	OR9A2	Q8NGT5	310 aa		9.18	□□□□□ -0.94
ERCC3-208	ENST00000491292	TM4SF18	Q96CE8	201 aa		9.18	□□□□□ -0.94
ERCC3-208	ENST00000491292	PPP1R16A	Q96I34	528 aa		9.18	□□□□□ -0.94
ERCC3-208	ENST00000491292	ZNF416	Q9BWM5	594 aa		9.18	□□□□□ -0.94
ERCC3-208	ENST00000491292	MYOF	Q9NZM1	2061 aa		9.18	□□□□□ -0.94
ERCC3-208	ENST00000491292	CDHR4	A6H8M9	788 aa		9.18	□□□□□ -0.94
ERCC3-208	ENST00000491292	LRRC72	A6NJI9	287 aa		9.18	□□□□□ -0.94
ERCC3-208	ENST00000491292	SGK494	L7N484	410 aa		9.18	□□□□□ -0.94
ERCC3-208	ENST00000491292	TMPRSS11D	O60235	418 aa		9.18	□□□□□ -0.94
ERCC3-208	ENST00000491292	ARL6IP5	O75915	188 aa		9.18	□□□□□ -0.94
ERCC3-208	ENST00000491292	HLA-DQA2	P01906	255 aa		9.18	□□□□□ -0.94
ERCC3-208	ENST00000491292	CHRM4	P08173	479 aa		9.18	□□□□□ -0.94
ERCC3-208	ENST00000491292	HOXB9	P17482	250 aa	Predicted RBP	9.18	□□□□□ -0.94
ERCC3-208	ENST00000491292	RBMS1	P29558	406 aa	Known RBP	9.18	□□□□□ -0.94
ERCC3-208	ENST00000491292	SORD	Q00796	357 aa		9.18	□□□□□ -0.94
ERCC3-208	ENST00000491292	TSPAN31	Q12999	210 aa		9.18	□□□□□ -0.94
ERCC3-208	ENST00000491292	DUSP6	Q16828	381 aa		9.18	□□□□□ -0.94
ERCC3-208	ENST00000491292	SLC22A10	Q63ZE4	541 aa		9.18	□□□□□ -0.94
ERCC3-208	ENST00000491292	GPR139	Q6DWJ6	353 aa		9.18	□□□□□ -0.94
ERCC3-208	ENST00000491292	ZC3H14	Q6PJT7	736 aa	Known RBP	9.18	□□□□□ -0.94
ERCC3-208	ENST00000491292	SLAIN1	Q8ND83	568 aa		9.18	□□□□□ -0.94
ERCC3-208	ENST00000491292	OR4Q3	Q8NH05	313 aa		9.18	□□□□□ -0.94
ERCC3-208	ENST00000491292	OR52I2	Q8NH67	350 aa		9.18	□□□□□ -0.94
ERCC3-208	ENST00000491292	SUN3	Q8TAQ9	357 aa		9.18	□□□□□ -0.94
ERCC3-208	ENST00000491292	THAP4	Q8WY91	577 aa		9.18	□□□□□ -0.94
ERCC3-208	ENST00000491292	FCRL1	Q96LA6	429 aa		9.18	□□□□□ -0.94
ERCC3-208	ENST00000491292	RBP7	Q96R05	134 aa		9.18	□□□□□ -0.94
ERCC3-208	ENST00000491292	MFF	Q9GZY8	342 aa		9.18	□□□□□ -0.94
ERCC3-208	ENST00000491292	GLIPR2	Q9H4G4	154 aa		9.18	□□□□□ -0.94
ERCC3-208	ENST00000491292	ZNF768	Q9H5H4	540 aa	Known RBP	9.18	□□□□□ -0.94
ERCC3-208	ENST00000491292	ZNF334	Q9HCZ1	680 aa	Predicted RBP	9.18	□□□□□ -0.94
ERCC3-208	ENST00000491292	MARCH5	Q9NX47	278 aa		9.18	□□□□□ -0.94
ERCC3-208	ENST00000491292	FARSA	Q9Y285	508 aa	Known RBP	9.18	□□□□□ -0.94
ERCC3-208	ENST00000491292	PLEKHA6	Q9Y2H5	1048 aa		9.18	□□□□□ -0.94
ERCC3-208	ENST00000491292	WNT6	Q9Y6F9	365 aa		9.18	□□□□□ -0.94
ERCC3-208	ENST00000491292	SCN2A	Q99250	2005 aa		9.18	□□□□□ -0.94
ERCC3-208	ENST00000491292	PSME4	Q14997	1843 aa		9.18	□□□□□ -0.94
ERCC3-208	ENST00000491292	UNC119B	A6NIH7	251 aa		9.17	□□□□□ -0.94
ERCC3-208	ENST00000491292	ANXA2P2	A6NMY6	339 aa		9.17	□□□□□ -0.94
ERCC3-208	ENST00000491292	GMDS	O60547	372 aa		9.17	□□□□□ -0.94
ERCC3-208	ENST00000491292	FCMR	O60667	390 aa		9.17	□□□□□ -0.94
ERCC3-208	ENST00000491292	ANXA2	P07355	339 aa	Known RBP	9.17	□□□□□ -0.94
ERCC3-208	ENST00000491292	HMGA1	P17096	107 aa	Known RBP	9.17	□□□□□ -0.94
ERCC3-208	ENST00000491292	CFL1	P23528	166 aa	Known RBP	9.17	□□□□□ -0.94
ERCC3-208	ENST00000491292	PSMD4	P55036	377 aa	Known RBP	9.17	□□□□□ -0.94
ERCC3-208	ENST00000491292	PCBP3	P57721	371 aa	Known RBP	9.17	□□□□□ -0.94
ERCC3-208	ENST00000491292	LTB4R	Q15722	352 aa		9.17	□□□□□ -0.94
ERCC3-208	ENST00000491292	CLLU1	Q5K131	121 aa		9.17	□□□□□ -0.94
ERCC3-208	ENST00000491292	LY6G5C	Q5SRR4	150 aa		9.17	□□□□□ -0.94
ERCC3-208	ENST00000491292	RAB12	Q6IQ22	244 aa		9.17	□□□□□ -0.94
ERCC3-208	ENST00000491292	AMZ2	Q86W34	360 aa		9.17	□□□□□ -0.94
ERCC3-208	ENST00000491292	LINC00471	Q8N535	108 aa		9.17	□□□□□ -0.94
ERCC3-208	ENST00000491292	SDR9C7	Q8NEX9	313 aa		9.17	□□□□□ -0.94
ERCC3-208	ENST00000491292	TMEM185A	Q8NFB2	350 aa		9.17	□□□□□ -0.94
ERCC3-208	ENST00000491292	OR52E2	Q8NGJ4	325 aa		9.17	□□□□□ -0.94
ERCC3-208	ENST00000491292	OR2T4	Q8NH00	348 aa		9.17	□□□□□ -0.94
ERCC3-208	ENST00000491292	S100A16	Q96FQ6	103 aa	Known RBP	9.17	□□□□□ -0.94
ERCC3-208	ENST00000491292	DERL3	Q96Q80	235 aa		9.17	□□□□□ -0.94
ERCC3-208	ENST00000491292	NKX3-1	Q99801	234 aa	Predicted RBP	9.17	□□□□□ -0.94
ERCC3-208	ENST00000491292	SLC6A15	Q9H2J7	730 aa		9.17	□□□□□ -0.94
ERCC3-208	ENST00000491292	ZFP64	Q9NPA5	681 aa		9.17	□□□□□ -0.94
ERCC3-208	ENST00000491292	HPF1	Q9NWY4	346 aa		9.17	□□□□□ -0.94
ERCC3-208	ENST00000491292	EDAR	Q9UNE0	448 aa		9.17	□□□□□ -0.94
ERCC3-208	ENST00000491292	GPR55	Q9Y2T6	319 aa	Predicted RBP	9.17	□□□□□ -0.94
ERCC3-208	ENST00000491292	SIRT4	Q9Y6E7	314 aa	Predicted RBP	9.17	□□□□□ -0.94
ERCC3-208	ENST00000491292		A0A1W2PRQ8	180 aa		9.17	□□□□□ -0.94
ERCC3-208	ENST00000491292	LINC00862	A6NCI5	91 aa		9.17	□□□□□ -0.94
ERCC3-208	ENST00000491292		K7ESM1	405 aa		9.17	□□□□□ -0.94
ERCC3-208	ENST00000491292	GLUL	P15104	373 aa		9.17	□□□□□ -0.94
ERCC3-208	ENST00000491292	TAS2R38	P59533	333 aa		9.17	□□□□□ -0.94
ERCC3-208	ENST00000491292	BTN3A2	P78410	334 aa		9.17	□□□□□ -0.94
ERCC3-208	ENST00000491292	PRKCZ	Q05513	592 aa		9.17	□□□□□ -0.94
ERCC3-208	ENST00000491292	YOD1	Q5VVQ6	348 aa	Predicted RBP	9.17	□□□□□ -0.94
ERCC3-208	ENST00000491292	OLFML2A	Q68BL7	652 aa		9.17	□□□□□ -0.94
ERCC3-208	ENST00000491292	ZNF770	Q6IQ21	691 aa	Predicted RBP	9.17	□□□□□ -0.94
ERCC3-208	ENST00000491292	HEPHL1	Q6MZM0	1159 aa		9.17	□□□□□ -0.94
ERCC3-208	ENST00000491292	LIN54	Q6MZP7	749 aa		9.17	□□□□□ -0.94
ERCC3-208	ENST00000491292	OAF	Q86UD1	273 aa		9.17	□□□□□ -0.94
ERCC3-208	ENST00000491292	TMPRSS12	Q86WS5	348 aa		9.17	□□□□□ -0.94
ERCC3-208	ENST00000491292	NPAS4	Q8IUM7	802 aa		9.17	□□□□□ -0.94
ERCC3-208	ENST00000491292	LIX1L	Q8IVB5	337 aa		9.17	□□□□□ -0.94
ERCC3-208	ENST00000491292	ZFP82	Q8N141	532 aa		9.17	□□□□□ -0.94

Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms