RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 ERLIN1O75477 346 aa28.18■■■□□ 2.1
LDB1-204ENST00000490751 OPN1LWP04000 364 aa28.18■■■□□ 2.1
LDB1-204ENST00000490751 RAC1P63000 192 aa28.18■■■□□ 2.1
LDB1-204ENST00000490751 PPP4R4Q6NUP7 873 aa28.18■■■□□ 2.1
LDB1-204ENST00000490751 CBLN3Q6UW01 205 aa28.18■■■□□ 2.1
LDB1-204ENST00000490751 CDC20BQ86Y33 519 aa28.18■■■□□ 2.1
LDB1-204ENST00000490751 ZNF614Q8N883 585 aa28.18■■■□□ 2.1
LDB1-204ENST00000490751 SDF2Q99470 211 aa28.18■■■□□ 2.1
LDB1-204ENST00000490751 AQP8O94778 261 aa28.17■■■□□ 2.1
LDB1-204ENST00000490751 LINGO3P0C6S8 592 aa28.17■■■□□ 2.1
LDB1-204ENST00000490751 FCGR2AP12318 317 aa28.17■■■□□ 2.1
LDB1-204ENST00000490751 PHC1P78364 1004 aa28.17■■■□□ 2.1
LDB1-204ENST00000490751 CTU2Q2VPK5 515 aaKnown RBP28.17■■■□□ 2.1
LDB1-204ENST00000490751 SPANXN4Q5MJ08 99 aa28.17■■■□□ 2.1
LDB1-204ENST00000490751 ANXA8L1Q5VT79 327 aa28.17■■■□□ 2.1
LDB1-204ENST00000490751 FBXW10Q5XX13 1052 aa28.17■■■□□ 2.1
LDB1-204ENST00000490751 OGFOD2Q6N063 350 aa28.17■■■□□ 2.1
LDB1-204ENST00000490751 OR10D3Q8NH80 312 aa28.17■■■□□ 2.1
LDB1-204ENST00000490751 ADGRG7Q96K78 797 aa28.17■■■□□ 2.1
LDB1-204ENST00000490751 OPN3Q9H1Y3 402 aaPredicted RBP28.17■■■□□ 2.1
LDB1-204ENST00000490751 TMEM185BQ9H7F4 350 aa28.17■■■□□ 2.1
LDB1-204ENST00000490751 CARD8Q9Y2G2 431 aa28.17■■■□□ 2.1
LDB1-204ENST00000490751 DTNAQ9Y4J8 743 aa28.17■■■□□ 2.1
LDB1-204ENST00000490751 F8P00451 2351 aa28.16■■■□□ 2.1
LDB1-204ENST00000490751 PRSS51A0A1B0GVH4 220 aa28.16■■■□□ 2.1
LDB1-204ENST00000490751 DUXAA6NLW8 204 aa28.16■■■□□ 2.1
LDB1-204ENST00000490751 SDHDO14521 159 aa28.16■■■□□ 2.1
LDB1-204ENST00000490751 CPSF4O95639 269 aaKnown RBP28.16■■■□□ 2.1
LDB1-204ENST00000490751 ALDOCP09972 364 aaKnown RBP28.16■■■□□ 2.1
LDB1-204ENST00000490751 P2RX1P51575 399 aa28.16■■■□□ 2.1
LDB1-204ENST00000490751 CLNS1AP54105 237 aaKnown RBP28.16■■■□□ 2.1
LDB1-204ENST00000490751 MAGOHP61326 146 aaKnown RBP28.16■■■□□ 2.1
LDB1-204ENST00000490751 FOXF1Q12946 379 aa28.16■■■□□ 2.1
LDB1-204ENST00000490751 CHDHQ8NE62 594 aaPredicted RBP28.16■■■□□ 2.1
LDB1-204ENST00000490751 VPS37AQ8NEZ2 397 aa28.16■■■□□ 2.1
LDB1-204ENST00000490751 DACH2Q96NX9 599 aa28.16■■■□□ 2.1
LDB1-204ENST00000490751 PRRG4Q9BZD6 226 aa28.16■■■□□ 2.1
LDB1-204ENST00000490751 LIME1Q9H400 295 aa28.16■■■□□ 2.1
LDB1-204ENST00000490751 THAP1Q9NVV9 213 aa28.16■■■□□ 2.1
LDB1-204ENST00000490751 CELSR1Q9NYQ6 3014 aa28.16■■■□□ 2.1
LDB1-204ENST00000490751 HRNRQ86YZ3 2850 aaPredicted RBP28.15■■■□□ 2.1
LDB1-204ENST00000490751 SH3D21A4FU49 640 aa28.15■■■□□ 2.1
LDB1-204ENST00000490751 GTPBP1O00178 669 aaKnown RBP28.15■■■□□ 2.1
LDB1-204ENST00000490751 NUDT14O95848 222 aa28.15■■■□□ 2.1
LDB1-204ENST00000490751 ME2P23368 584 aa28.15■■■□□ 2.1
LDB1-204ENST00000490751 SLC6A8P48029 635 aa28.15■■■□□ 2.1
LDB1-204ENST00000490751 DPY19L1Q2PZI1 675 aa28.15■■■□□ 2.1
LDB1-204ENST00000490751 NDUFAF6Q330K2 333 aa28.15■■■□□ 2.1
LDB1-204ENST00000490751 BEND6Q5SZJ8 279 aaPredicted RBP28.15■■■□□ 2.1
LDB1-204ENST00000490751 ESPNLQ6ZVH7 1005 aa28.15■■■□□ 2.1
LDB1-204ENST00000490751 PAQR5Q9NXK6 330 aaPredicted RBP28.15■■■□□ 2.1
LDB1-204ENST00000490751 MARCOQ9UEW3 520 aaPredicted RBP28.15■■■□□ 2.1
LDB1-204ENST00000490751 ICAM5Q9UMF0 924 aa28.15■■■□□ 2.1
LDB1-204ENST00000490751 AKAP6Q13023 2319 aa28.15■■■□□ 2.1
LDB1-204ENST00000490751 TEP1Q99973 2627 aaKnown RBP28.14■■■□□ 2.1
LDB1-204ENST00000490751 E9PBE3 544 aa28.14■■■□□ 2.1
LDB1-204ENST00000490751 TNFSF11O14788 317 aa28.14■■■□□ 2.1
LDB1-204ENST00000490751 CXCL13O43927 109 aa28.14■■■□□ 2.1
LDB1-204ENST00000490751 SNNO75324 88 aaPredicted RBP28.14■■■□□ 2.1
LDB1-204ENST00000490751 AK1P00568 194 aa28.14■■■□□ 2.1
LDB1-204ENST00000490751 IL11P20809 199 aa28.14■■■□□ 2.1
LDB1-204ENST00000490751 UQCRC2P22695 453 aa28.14■■■□□ 2.1
LDB1-204ENST00000490751 EIF1P41567 113 aaKnown RBP28.14■■■□□ 2.1
LDB1-204ENST00000490751 ART1P52961 327 aa28.14■■■□□ 2.1
LDB1-204ENST00000490751 IST1P53990 364 aa28.14■■■□□ 2.1
LDB1-204ENST00000490751 SLC18A1P54219 525 aa28.14■■■□□ 2.1
LDB1-204ENST00000490751 CASP9P55211 416 aa28.14■■■□□ 2.1
LDB1-204ENST00000490751 SUMO3P55854 103 aaPredicted RBP28.14■■■□□ 2.1
LDB1-204ENST00000490751 NME5P56597 212 aa28.14■■■□□ 2.1
LDB1-204ENST00000490751 FAM27E3Q08E93 113 aa28.14■■■□□ 2.1
LDB1-204ENST00000490751 FGFBP1Q14512 234 aa28.14■■■□□ 2.1
LDB1-204ENST00000490751 GUSBP1Q15486 140 aa28.14■■■□□ 2.1
LDB1-204ENST00000490751 FAM174BQ3ZCQ3 159 aa28.14■■■□□ 2.1
LDB1-204ENST00000490751 ZNF474Q6S9Z5 364 aaPredicted RBP28.14■■■□□ 2.1
LDB1-204ENST00000490751 SPNS3Q6ZMD2 512 aa28.14■■■□□ 2.1
LDB1-204ENST00000490751 OR2V1Q8NHB1 315 aa28.14■■■□□ 2.1
LDB1-204ENST00000490751 OR51I1Q9H343 314 aa28.14■■■□□ 2.1
LDB1-204ENST00000490751 TMBIM4Q9HC24 238 aa28.14■■■□□ 2.1
LDB1-204ENST00000490751 AIG1Q9NVV5 245 aa28.14■■■□□ 2.1
LDB1-204ENST00000490751 NKIRAS1Q9NYS0 192 aa28.14■■■□□ 2.1
LDB1-204ENST00000490751 MCTS1Q9ULC4 181 aaKnown RBP28.14■■■□□ 2.1
LDB1-204ENST00000490751 A0A0J9YW62 118 aa28.13■■■□□ 2.09
LDB1-204ENST00000490751 ADAMDEC1O15204 470 aa28.13■■■□□ 2.09
LDB1-204ENST00000490751 HDAC3O15379 428 aa28.13■■■□□ 2.09
LDB1-204ENST00000490751 CGAP01215 116 aa28.13■■■□□ 2.09
LDB1-204ENST00000490751 CASP8Q14790 479 aa28.13■■■□□ 2.09
LDB1-204ENST00000490751 GPR68Q15743 365 aa28.13■■■□□ 2.09
LDB1-204ENST00000490751 ARHGAP11BQ3KRB8 267 aa28.13■■■□□ 2.09
LDB1-204ENST00000490751 PDZK1Q5T2W1 519 aa28.13■■■□□ 2.09
LDB1-204ENST00000490751 OLIG3Q7RTU3 272 aa28.13■■■□□ 2.09
LDB1-204ENST00000490751 MIPOL1Q8TD10 442 aa28.13■■■□□ 2.09
LDB1-204ENST00000490751 NINJ1Q92982 152 aa28.13■■■□□ 2.09
LDB1-204ENST00000490751 TLCD1Q96CP7 247 aa28.13■■■□□ 2.09
LDB1-204ENST00000490751 TEX37Q96LM6 180 aa28.13■■■□□ 2.09
LDB1-204ENST00000490751 NMUR2Q9GZQ4 415 aa28.13■■■□□ 2.09
LDB1-204ENST00000490751 EXD2Q9NVH0 621 aa28.13■■■□□ 2.09
LDB1-204ENST00000490751 ST6GALNAC2Q9UJ37 374 aa28.13■■■□□ 2.09
LDB1-204ENST00000490751 GOLGA8QA0A0J9YX86 632 aa28.12■■■□□ 2.09
LDB1-204ENST00000490751 GOLGA8OA6NCC3 632 aa28.12■■■□□ 2.09
LDB1-204ENST00000490751 GOLGA8NF8WBI6 632 aa28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms