RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 RADILQ96JH8 1075 aa7.26□□□□□ -1.25
USP39-216ENST00000490193 AMDHD1Q96NU7 426 aa7.26□□□□□ -1.25
USP39-216ENST00000490193 ZNF382Q96SR6 550 aa7.26□□□□□ -1.25
USP39-216ENST00000490193 NAPGQ99747 312 aaPredicted RBP7.26□□□□□ -1.25
USP39-216ENST00000490193 MRPL57Q9BQC6 102 aaKnown RBP7.26□□□□□ -1.25
USP39-216ENST00000490193 KRTAP4-8Q9BYQ9 185 aa7.26□□□□□ -1.25
USP39-216ENST00000490193 SHARPINQ9H0F6 387 aa7.26□□□□□ -1.25
USP39-216ENST00000490193 MRPL46Q9H2W6 279 aaKnown RBP7.26□□□□□ -1.25
USP39-216ENST00000490193 GLIPR2Q9H4G4 154 aa7.26□□□□□ -1.25
USP39-216ENST00000490193 L2HGDHQ9H9P8 463 aa7.26□□□□□ -1.25
USP39-216ENST00000490193 TIGARQ9NQ88 270 aa7.26□□□□□ -1.25
USP39-216ENST00000490193 DDX18Q9NVP1 670 aaKnown RBP7.26□□□□□ -1.25
USP39-216ENST00000490193 DMGDHQ9UI17 866 aaKnown RBP7.26□□□□□ -1.25
USP39-216ENST00000490193 A0A1W2PQD3 144 aa7.25□□□□□ -1.25
USP39-216ENST00000490193 GXYLT2A0PJZ3 443 aa7.25□□□□□ -1.25
USP39-216ENST00000490193 ZNF814B7Z6K7 855 aa7.25□□□□□ -1.25
USP39-216ENST00000490193 H7C417 338 aa7.25□□□□□ -1.25
USP39-216ENST00000490193 GMFGO60234 142 aa7.25□□□□□ -1.25
USP39-216ENST00000490193 ULK1O75385 1050 aa7.25□□□□□ -1.25
USP39-216ENST00000490193 PRKD3O94806 890 aa7.25□□□□□ -1.25
USP39-216ENST00000490193 NKX2-2O95096 273 aa7.25□□□□□ -1.25
USP39-216ENST00000490193 PGM3O95394 542 aa7.25□□□□□ -1.25
USP39-216ENST00000490193 ADAP00813 363 aa7.25□□□□□ -1.25
USP39-216ENST00000490193 OPN1LWP04000 364 aa7.25□□□□□ -1.25
USP39-216ENST00000490193 YES1P07947 543 aa7.25□□□□□ -1.25
USP39-216ENST00000490193 ANXA4P09525 319 aaPredicted RBP7.25□□□□□ -1.25
USP39-216ENST00000490193 LINGO3P0C6S8 592 aa7.25□□□□□ -1.25
USP39-216ENST00000490193 IGHV4-31P0DP07 118 aa7.25□□□□□ -1.25
USP39-216ENST00000490193 TSPAN8P19075 237 aa7.25□□□□□ -1.25
USP39-216ENST00000490193 COX5AP20674 150 aa7.25□□□□□ -1.25
USP39-216ENST00000490193 NTSP30990 170 aa7.25□□□□□ -1.25
USP39-216ENST00000490193 LCN1P31025 176 aa7.25□□□□□ -1.25
USP39-216ENST00000490193 TTKP33981 857 aa7.25□□□□□ -1.25
USP39-216ENST00000490193 GABRA3P34903 492 aa7.25□□□□□ -1.25
USP39-216ENST00000490193 EIF1P41567 113 aaKnown RBP7.25□□□□□ -1.25
USP39-216ENST00000490193 OR3A2P47893 321 aa7.25□□□□□ -1.25
USP39-216ENST00000490193 HTR6P50406 440 aa7.25□□□□□ -1.25
USP39-216ENST00000490193 ZNF41P51814 821 aaPredicted RBP7.25□□□□□ -1.25
USP39-216ENST00000490193 CDH11P55287 796 aa7.25□□□□□ -1.25
USP39-216ENST00000490193 C21orf58P58505 322 aa7.25□□□□□ -1.25
USP39-216ENST00000490193 CLCQ05315 142 aa7.25□□□□□ -1.25
USP39-216ENST00000490193 SLC18A2Q05940 514 aa7.25□□□□□ -1.25
USP39-216ENST00000490193 PPA1Q15181 289 aa7.25□□□□□ -1.25
USP39-216ENST00000490193 UAP1Q16222 522 aaPredicted RBP7.25□□□□□ -1.25
USP39-216ENST00000490193 VPS26BQ4G0F5 336 aa7.25□□□□□ -1.25
USP39-216ENST00000490193 GLE1Q53GS7 698 aaKnown RBP7.25□□□□□ -1.25
USP39-216ENST00000490193 TIMM23BQ5SRD1 257 aa7.25□□□□□ -1.25
USP39-216ENST00000490193 CYB5R2Q6BCY4 276 aa7.25□□□□□ -1.25
USP39-216ENST00000490193 FAM71E1Q6IPT2 247 aa7.25□□□□□ -1.25
USP39-216ENST00000490193 BHLHA15Q7RTS1 189 aaPredicted RBP7.25□□□□□ -1.25
USP39-216ENST00000490193 P2RY8Q86VZ1 359 aa7.25□□□□□ -1.25
USP39-216ENST00000490193 TUSC5Q8IXB3 177 aa7.25□□□□□ -1.25
USP39-216ENST00000490193 LILRA2Q8N149 483 aa7.25□□□□□ -1.25
USP39-216ENST00000490193 ZNF619Q8N2I2 560 aa7.25□□□□□ -1.25
USP39-216ENST00000490193 SLC43A2Q8N370 569 aa7.25□□□□□ -1.25
USP39-216ENST00000490193 SPATA4Q8NEY3 305 aa7.25□□□□□ -1.25
USP39-216ENST00000490193 FAM110BQ8TC76 370 aa7.25□□□□□ -1.25
USP39-216ENST00000490193 C10orf105Q8TEF2 133 aa7.25□□□□□ -1.25
USP39-216ENST00000490193 SLC9A6Q92581 669 aa7.25□□□□□ -1.25
USP39-216ENST00000490193 PROX1Q92786 737 aa7.25□□□□□ -1.25
USP39-216ENST00000490193 MRRFQ96E11 262 aaKnown RBP7.25□□□□□ -1.25
USP39-216ENST00000490193 REXO5Q96IC2 774 aaKnown RBP7.25□□□□□ -1.25
USP39-216ENST00000490193 CACNG6Q9BXT2 260 aa7.25□□□□□ -1.25
USP39-216ENST00000490193 FUT8Q9BYC5 575 aa7.25□□□□□ -1.25
USP39-216ENST00000490193 SRXN1Q9BYN0 137 aa7.25□□□□□ -1.25
USP39-216ENST00000490193 ACSS3Q9H6R3 686 aa7.25□□□□□ -1.25
USP39-216ENST00000490193 TMEM185BQ9H7F4 350 aa7.25□□□□□ -1.25
USP39-216ENST00000490193 BCO1Q9HAY6 547 aa7.25□□□□□ -1.25
USP39-216ENST00000490193 MYNNQ9NPC7 610 aa7.25□□□□□ -1.25
USP39-216ENST00000490193 MIEF1Q9NQG6 463 aa7.25□□□□□ -1.25
USP39-216ENST00000490193 CBLN4Q9NTU7 201 aa7.25□□□□□ -1.25
USP39-216ENST00000490193 NTMQ9P121 344 aa7.25□□□□□ -1.25
USP39-216ENST00000490193 STK38LQ9Y2H1 464 aa7.25□□□□□ -1.25
USP39-216ENST00000490193 WBP11Q9Y2W2 641 aaKnown RBP7.25□□□□□ -1.25
USP39-216ENST00000490193 UTP11Q9Y3A2 253 aaKnown RBP7.25□□□□□ -1.25
USP39-216ENST00000490193 GJE1A6NN92 205 aa7.24□□□□□ -1.25
USP39-216ENST00000490193 KIF2AO00139 706 aaPredicted RBP7.24□□□□□ -1.25
USP39-216ENST00000490193 ABCD4O14678 606 aa7.24□□□□□ -1.25
USP39-216ENST00000490193 RGS14O43566 566 aa7.24□□□□□ -1.25
USP39-216ENST00000490193 LMX1BO60663 402 aa7.24□□□□□ -1.25
USP39-216ENST00000490193 ENO1P06733 434 aaKnown RBP7.24□□□□□ -1.25
USP39-216ENST00000490193 CSF3P09919 207 aa7.24□□□□□ -1.25
USP39-216ENST00000490193 ZNF16P17020 682 aaPredicted RBP7.24□□□□□ -1.25
USP39-216ENST00000490193 SRD5A1P18405 259 aa7.24□□□□□ -1.25
USP39-216ENST00000490193 IGFBP5P24593 272 aa7.24□□□□□ -1.25
USP39-216ENST00000490193 SHC1P29353 583 aa7.24□□□□□ -1.25
USP39-216ENST00000490193 HMOX2P30519 316 aa7.24□□□□□ -1.25
USP39-216ENST00000490193 RFX3P48380 749 aa7.24□□□□□ -1.25
USP39-216ENST00000490193 GZMKP49863 264 aa7.24□□□□□ -1.25
USP39-216ENST00000490193 GNG11P61952 73 aa7.24□□□□□ -1.25
USP39-216ENST00000490193 C2orf80Q0P641 193 aa7.24□□□□□ -1.25
USP39-216ENST00000490193 UNC50Q53HI1 259 aa7.24□□□□□ -1.25
USP39-216ENST00000490193 ZNF678Q5SXM1 525 aa7.24□□□□□ -1.25
USP39-216ENST00000490193 Q6ZSR9 355 aa7.24□□□□□ -1.25
USP39-216ENST00000490193 GPRIN3Q6ZVF9 776 aa7.24□□□□□ -1.25
USP39-216ENST00000490193 IKBIPQ70UQ0 350 aa7.24□□□□□ -1.25
USP39-216ENST00000490193 FCRLAQ7L513 359 aa7.24□□□□□ -1.25
USP39-216ENST00000490193 ZNF525Q8N782 197 aa7.24□□□□□ -1.25
USP39-216ENST00000490193 CDRT4Q8N9R6 151 aa7.24□□□□□ -1.25
USP39-216ENST00000490193 OR6Y1Q8NGX8 325 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms