RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 FRKP42685 505 aaPredicted RBP14.12□□□□□ -0.15
PLOD3-216ENST00000489927 SERPINB4P48594 390 aa14.12□□□□□ -0.15
PLOD3-216ENST00000489927 NAA20P61599 178 aa14.12□□□□□ -0.15
PLOD3-216ENST00000489927 FOXF1Q12946 379 aa14.12□□□□□ -0.15
PLOD3-216ENST00000489927 TAB1Q15750 504 aa14.12□□□□□ -0.15
PLOD3-216ENST00000489927 ETFDHQ16134 617 aa14.12□□□□□ -0.15
PLOD3-216ENST00000489927 CFAP157Q5JU67 520 aa14.12□□□□□ -0.15
PLOD3-216ENST00000489927 SFRP5Q5T4F7 317 aa14.12□□□□□ -0.15
PLOD3-216ENST00000489927 HEPHL1Q6MZM0 1159 aa14.12□□□□□ -0.15
PLOD3-216ENST00000489927 ATG4DQ86TL0 474 aaPredicted RBP14.12□□□□□ -0.15
PLOD3-216ENST00000489927 TUSC5Q8IXB3 177 aa14.12□□□□□ -0.15
PLOD3-216ENST00000489927 ZNF619Q8N2I2 560 aa14.12□□□□□ -0.15
PLOD3-216ENST00000489927 COX18Q8N8Q8 333 aa14.12□□□□□ -0.15
PLOD3-216ENST00000489927 OR2T11Q8NH01 316 aa14.12□□□□□ -0.15
PLOD3-216ENST00000489927 CLHC1Q8NHS4 586 aa14.12□□□□□ -0.15
PLOD3-216ENST00000489927 TRMT61AQ96FX7 289 aaKnown RBP14.12□□□□□ -0.15
PLOD3-216ENST00000489927 REXO5Q96IC2 774 aaKnown RBP14.12□□□□□ -0.15
PLOD3-216ENST00000489927 FCRL1Q96LA6 429 aa14.12□□□□□ -0.15
PLOD3-216ENST00000489927 TSSK3Q96PN8 268 aa14.12□□□□□ -0.15
PLOD3-216ENST00000489927 CCT7Q99832 543 aa14.12□□□□□ -0.15
PLOD3-216ENST00000489927 REG4Q9BYZ8 158 aa14.12□□□□□ -0.15
PLOD3-216ENST00000489927 ESRP2Q9H6T0 727 aaKnown RBP14.12□□□□□ -0.15
PLOD3-216ENST00000489927 LRTM1Q9HBL6 345 aa14.12□□□□□ -0.15
PLOD3-216ENST00000489927 SH3BP4Q9P0V3 963 aa14.12□□□□□ -0.15
PLOD3-216ENST00000489927 KLHL13Q9P2N7 655 aa14.12□□□□□ -0.15
PLOD3-216ENST00000489927 MAGED1Q9Y5V3 778 aaPredicted RBP14.12□□□□□ -0.15
PLOD3-216ENST00000489927 MXRA5Q9NR99 2828 aa14.12□□□□□ -0.15
PLOD3-216ENST00000489927 SLC28A1O00337 649 aa14.11□□□□□ -0.15
PLOD3-216ENST00000489927 GLRA3O75311 464 aa14.11□□□□□ -0.15
PLOD3-216ENST00000489927 CD3EP07766 207 aa14.11□□□□□ -0.15
PLOD3-216ENST00000489927 ALOX5P09917 674 aa14.11□□□□□ -0.15
PLOD3-216ENST00000489927 EFNA1P20827 205 aaPredicted RBP14.11□□□□□ -0.15
PLOD3-216ENST00000489927 IL32P24001 234 aa14.11□□□□□ -0.15
PLOD3-216ENST00000489927 ELK4P28324 431 aa14.11□□□□□ -0.15
PLOD3-216ENST00000489927 LCN1P31025 176 aa14.11□□□□□ -0.15
PLOD3-216ENST00000489927 EIF1P41567 113 aaKnown RBP14.11□□□□□ -0.15
PLOD3-216ENST00000489927 RNF144AP50876 292 aaPredicted RBP14.11□□□□□ -0.15
PLOD3-216ENST00000489927 DNAJB13P59910 316 aa14.11□□□□□ -0.15
PLOD3-216ENST00000489927 ZNF117Q03924 483 aa14.11□□□□□ -0.15
PLOD3-216ENST00000489927 PDE7AQ13946 482 aa14.11□□□□□ -0.15
PLOD3-216ENST00000489927 RNPS1Q15287 305 aaKnown RBP14.11□□□□□ -0.15
PLOD3-216ENST00000489927 EXOSC6Q5RKV6 272 aaKnown RBP14.11□□□□□ -0.15
PLOD3-216ENST00000489927 Q6ZSR9 355 aa14.11□□□□□ -0.15
PLOD3-216ENST00000489927 BANPQ8N9N5 519 aa14.11□□□□□ -0.15
PLOD3-216ENST00000489927 MNS1Q8NEH6 495 aa14.11□□□□□ -0.15
PLOD3-216ENST00000489927 SMAP2Q8WU79 429 aaPredicted RBP14.11□□□□□ -0.15
PLOD3-216ENST00000489927 JADE3Q92613 823 aa14.11□□□□□ -0.15
PLOD3-216ENST00000489927 GTPBP3Q969Y2 492 aaKnown RBP14.11□□□□□ -0.15
PLOD3-216ENST00000489927 CPNE4Q96A23 557 aaPredicted RBP14.11□□□□□ -0.15
PLOD3-216ENST00000489927 NGBQ9NPG2 151 aa14.11□□□□□ -0.15
PLOD3-216ENST00000489927 TIGARQ9NQ88 270 aa14.11□□□□□ -0.15
PLOD3-216ENST00000489927 ACSS1Q9NUB1 689 aaPredicted RBP14.11□□□□□ -0.15
PLOD3-216ENST00000489927 BAIAP2L1Q9UHR4 511 aa14.11□□□□□ -0.15
PLOD3-216ENST00000489927 LIPT1Q9Y234 373 aa14.11□□□□□ -0.15
PLOD3-216ENST00000489927 SNX8Q9Y5X2 465 aa14.11□□□□□ -0.15
PLOD3-216ENST00000489927 PRR14LQ5THK1 2151 aa14.1□□□□□ -0.15
PLOD3-216ENST00000489927 OIP5O43482 229 aa14.1□□□□□ -0.15
PLOD3-216ENST00000489927 RGS14O43566 566 aa14.1□□□□□ -0.15
PLOD3-216ENST00000489927 ADAP00813 363 aa14.1□□□□□ -0.15
PLOD3-216ENST00000489927 ADH6P28332 368 aa14.1□□□□□ -0.15
PLOD3-216ENST00000489927 IDUAP35475 653 aa14.1□□□□□ -0.15
PLOD3-216ENST00000489927 ACVR1BP36896 505 aa14.1□□□□□ -0.15
PLOD3-216ENST00000489927 POU6F2P78424 691 aaPredicted RBP14.1□□□□□ -0.15
PLOD3-216ENST00000489927 BSPH1Q075Z2 132 aa14.1□□□□□ -0.15
PLOD3-216ENST00000489927 ZNF672Q499Z4 452 aaPredicted RBP14.1□□□□□ -0.15
PLOD3-216ENST00000489927 RFTN2Q52LD8 501 aaPredicted RBP14.1□□□□□ -0.15
PLOD3-216ENST00000489927 ZCCHC12Q6PEW1 402 aa14.1□□□□□ -0.15
PLOD3-216ENST00000489927 CBLN3Q6UW01 205 aa14.1□□□□□ -0.15
PLOD3-216ENST00000489927 SEZ6L2Q6UXD5 910 aa14.1□□□□□ -0.15
PLOD3-216ENST00000489927 FCRLAQ7L513 359 aa14.1□□□□□ -0.15
PLOD3-216ENST00000489927 KBTBD8Q8NFY9 601 aa14.1□□□□□ -0.15
PLOD3-216ENST00000489927 FBXO27Q8NI29 283 aa14.1□□□□□ -0.15
PLOD3-216ENST00000489927 PHOSPHO1Q8TCT1 267 aa14.1□□□□□ -0.15
PLOD3-216ENST00000489927 HSD17B8Q92506 261 aa14.1□□□□□ -0.15
PLOD3-216ENST00000489927 KISS1RQ969F8 398 aaPredicted RBP14.1□□□□□ -0.15
PLOD3-216ENST00000489927 FAM120BQ96EK7 910 aaKnown RBP14.1□□□□□ -0.15
PLOD3-216ENST00000489927 BTBD2Q9BX70 525 aa14.1□□□□□ -0.15
PLOD3-216ENST00000489927 SLCO5A1Q9H2Y9 848 aa14.1□□□□□ -0.15
PLOD3-216ENST00000489927 C12orf65Q9H3J6 166 aaKnown RBP14.1□□□□□ -0.15
PLOD3-216ENST00000489927 OXSMQ9NWU1 459 aa14.1□□□□□ -0.15
PLOD3-216ENST00000489927 SONP18583 2426 aaKnown RBP14.1□□□□□ -0.15
PLOD3-216ENST00000489927 STAB1Q9NY15 2570 aa14.09□□□□□ -0.15
PLOD3-216ENST00000489927 A0A1W2PP18 115 aa14.09□□□□□ -0.15
PLOD3-216ENST00000489927 ZNF195O14628 629 aa14.09□□□□□ -0.15
PLOD3-216ENST00000489927 PLIN3O60664 434 aa14.09□□□□□ -0.15
PLOD3-216ENST00000489927 PRKD3O94806 890 aa14.09□□□□□ -0.15
PLOD3-216ENST00000489927 HSPA4LO95757 839 aa14.09□□□□□ -0.15
PLOD3-216ENST00000489927 NUDT14O95848 222 aa14.09□□□□□ -0.15
PLOD3-216ENST00000489927 IGHV4-39P01824 125 aa14.09□□□□□ -0.15
PLOD3-216ENST00000489927 HMGN2P05204 90 aaKnown RBP14.09□□□□□ -0.15
PLOD3-216ENST00000489927 YES1P07947 543 aa14.09□□□□□ -0.15
PLOD3-216ENST00000489927 FAM153BP0C7A2 387 aa14.09□□□□□ -0.15
PLOD3-216ENST00000489927 RPL38P63173 70 aaKnown RBP14.09□□□□□ -0.15
PLOD3-216ENST00000489927 FAPQ12884 760 aa14.09□□□□□ -0.15
PLOD3-216ENST00000489927 P2RY6Q15077 328 aa14.09□□□□□ -0.15
PLOD3-216ENST00000489927 TOMM34Q15785 309 aaPredicted RBP14.09□□□□□ -0.15
PLOD3-216ENST00000489927 PGGHGQ32M88 737 aa14.09□□□□□ -0.15
PLOD3-216ENST00000489927 TMEM176BQ3YBM2 270 aaPredicted RBP14.09□□□□□ -0.15
PLOD3-216ENST00000489927 CCDC153Q494R4 210 aa14.09□□□□□ -0.15
PLOD3-216ENST00000489927 FAM153CQ494X1 144 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms